BAC Information

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BAC

Clone NameB6Ng01-257M13
Chromosome1 (Build37)
Map Location 132,241,246 - 132,242,329
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257M13.bB6Ng01-257M13.g
ACCGA063393GA063394
length1,2211,073
definitionB6Ng01-257M13.b B6Ng01-257M13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatagttccagtccctacattaaatcattgatccattttgata
gattctcatgcaaggtagaaggcatgggtattgcttcatgcttctgtttg
tagaaatccagttttcctggtaccatttgttaaagatgctctcttctcca
ctggctattactttcaaatttgttaaaactaagtgactgtaacctgtaca
tttatttctgagtcctccacgcatctgcttctgtgccactaacatgcagt
tttctttggtgttttccactctggcttacactatgatttgagactgggaa
ctgtgataccttgattggtgcaggttgatttaagtatttagggccttttg
tgcttccatatgaacttaaggattgtttcatttttctggttctgtgaaga
atgacattggaattttcatgaagactgaatctgtagttttcaaaaatgca
gggattttcacaaaattaattctgcctattatgaccataaggaggttcca
tctttcagtgtcttctttaatttctttctttagaatcttaaagttgtttt
gcagaggctccacacccctttggttaggtttatccctaggtatgtttaag
ctattgtgaatgagattttccatctctgatttctttcttgattcattcat
tactagtatacagaaaactttctgattttgttcattgattttatgtcttg
ctataattctgcaagtgttttatcacgtctgagagttttctggtagtgtc
tttagagtctttcaagtataggatcttgtcatctgcatttgaatgagaag
agagggtaagcaactagcctgtttccagagtgtagagatagcactctggg
gttttcctcaggtctatcagatggagccttcctagttgtcttagtcaggt
ttctattcctgcacaaacatcatgaccagaagcaagttggggaggaaagg
gtttatttggcttacactttcatactgctgtttatcaccaaagaagtcag
gactgaactcaagcagccagggagcagagctgatgcagaagcatggagga
tgttcttttactggcttgcctctccttgctgctcagctgttcttcttata
aaccaagactatcagccaagaatgtcccacccacaggcctttcctgatac
ctatggaaaatggctacgttgaatctagagcattttcccactggaacttt
ctctggaatctcaccgtggtg
gaattccctactccttccttggaacagaatctatttatttcctctgtgga
tagatcttggagcccttagtggtggctggagagattgctttctggtactt
tgagcgttattgtcattgtggggtatttacacttcctagccatagttgcc
aaagcctagtttttatgtaatagaatatcaggcattttaaagcaaaggct
cctgctctaatgaaggctgagaaaggctggcctgcttgttgtgggtacta
acaagcagagcagccttagatttgtttctcacgccgagatttgtctgacc
cttctgtgcttacatcttgtttcatcagttgaccctggttctcctcagca
ctgaggcactagggaggctttcaagagccatgcctggcccagaatactcc
ttttggcatgcaaggagagactttccaattaggtcatagctaaatattga
ttctttattaaatagaaacgtaaataccattttatttcctgtgtagtatt
atttaacatcctctctggctacagaggtccaagtgctatgatttccactg
tttctcaaagctgaagcctacaacatgacatctaagaagaaaaaggtgag
acaggagaccactggacaagactcctgcagcctgatgagaagtgacagtt
ttgagtctgtttttttcaggcaccaaccagggagatgttttttgagagac
tgtcagttatttgagtaaagatagcagtgatgagcgtggaagtctgaaaa
ggcaggaaatacacaaaacatcagtcacaaaagaaaaatgtccttgcact
ggaatgctgctgttgaggaacactccgggtattcaggatagggtggggta
cctgggcattcaggtgcagtgtggatggagtgccgtgactggcaattggc
tgccatcactgtaacaaaatgactgaaacatcaaattacaaaagaagagg
tttatgatggcccatgatcaagtgatcttgtactttggcacatgctaaag
gcacatagctagtgaggatacatactgaaaaaaatgtctcccctttccct
ccagaaagatataagacccagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132241246_132242329
seq2: B6Ng01-257M13.g_66_1138 (reverse)

seq1  TCCTGGGTTCTTTATTATCCTTTCTTTGGAGGG-AAGGGGAGAACATTTT  49
      ||||||||  | |||    |||||  ||||||| |||||||| |||||||
seq2  TCCTGGGTCTTATAT----CTTTC--TGGAGGGAAAGGGGAG-ACATTTT  43

seq1  TTTCCAGTATGTATCCTCACTAGCTTATGTGCCTTTAGCATGTGCCCAAA  99
      ||| |||||||||||||||||||| ||||||||||||||||||| |||||
seq2  TTT-CAGTATGTATCCTCACTAGC-TATGTGCCTTTAGCATGTG-CCAAA  90

seq1  GTAACAAGATCACTTGATCATGGGCCATCATAAACCTCTTCTTTTTGTAA  149
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GT-ACAAGATCACTTGATCATGGGCCATCATAAACCTCTTC-TTTTGTAA  138

seq1  TTTGATTGTTTCAGTCATTTTGTTACAGTGATGGCAGCCAATTGCCAGTC  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGA-TGTTTCAGTCATTTTGTTACAGTGATGGCAGCCAATTGCCAGTC  187

seq1  ACGGCACTCCATCCACACTGCACCTGAATG-CCAGGTACCCCACCCTATC  248
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACGGCACTCCATCCACACTGCACCTGAATGCCCAGGTACCCCACCCTATC  237

seq1  CTGAATACCCGGAGTGTTCCTCAACAGCAGCATTCCAGTGCAAGGACATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATACCCGGAGTGTTCCTCAACAGCAGCATTCCAGTGCAAGGACATT  287

seq1  TTTCTTTTGTGACTGATGTTTTGTGTATTTCCTGCCTTTTCAGACTTCCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGTGACTGATGTTTTGTGTATTTCCTGCCTTTTCAGACTTCCA  337

seq1  CGCTCATCACTGCTATCTTTACTCAAATAACTGACAGTCTCTCAAAAAAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCATCACTGCTATCTTTACTCAAATAACTGACAGTCTCTCAAAAAAC  387

seq1  ATCTCCCTGGTTGGTGCCTGAAAAAAACAGACTCAAAACTGTCACTTCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCTGGTTGGTGCCTGAAAAAAACAGACTCAAAACTGTCACTTCTC  437

seq1  ATCAGGCTGCAGGAGTCTTGTCCAGTGGTCTCCTGTCTCACCTTTTTCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCTGCAGGAGTCTTGTCCAGTGGTCTCCTGTCTCACCTTTTTCTT  487

seq1  CTTAGATGTCATGTTGTAGGCTTCAGCTTTGAGAAACAGTGGAAATCATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATGTCATGTTGTAGGCTTCAGCTTTGAGAAACAGTGGAAATCATA  537

seq1  GCACTTGGACCTCTGTAGCCAGAGAGGATGTTAAATAATACTACACAGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGGACCTCTGTAGCCAGAGAGGATGTTAAATAATACTACACAGGA  587

seq1  AATAAAATGGTATTTACGTTTCTATTTAATAAAGAATCAATATTTAGCTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGGTATTTACGTTTCTATTTAATAAAGAATCAATATTTAGCTA  637

seq1  TGACCTAATTGGAAAGTCTCTCCTTGCATGCCAAAAGGAGTATTCTGGGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTAATTGGAAAGTCTCTCCTTGCATGCCAAAAGGAGTATTCTGGGC  687

seq1  CAGGCATGGCTCTTGAAAGCCTCCCTAGTGCCTCAGTGCTGAGGAGAACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGCTCTTGAAAGCCTCCCTAGTGCCTCAGTGCTGAGGAGAACC  737

seq1  AGGGTCAACTGATGAAACAAGATGTAAGCACAGAAGGGTCAGACAAATCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAACTGATGAAACAAGATGTAAGCACAGAAGGGTCAGACAAATCT  787

seq1  CGGCGTGAGAAACAAATCTAAGGCTGCTCTGCTTGTTAGTACCCACAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCGTGAGAAACAAATCTAAGGCTGCTCTGCTTGTTAGTACCCACAACA  837

seq1  AGCAGGCCAGCCTTTCTCAGCCTTCATTAGAGCAGGAGCCTTTGCTTTAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCCAGCCTTTCTCAGCCTTCATTAGAGCAGGAGCCTTTGCTTTAA  887

seq1  AATGCCTGATATTCTATTACATAAAAACTAGGCTTTGGCAACTATGGCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTGATATTCTATTACATAAAAACTAGGCTTTGGCAACTATGGCTA  937

seq1  GGAAGTGTAAATACCCCACAATGACAATAACGCTCAAAGTACCAGAAAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTGTAAATACCCCACAATGACAATAACGCTCAAAGTACCAGAAAGC  987

seq1  AATCTCTCCAGCCACCACTAAGGGCTCCAAGATCTATCCACAGAGGAAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCCAGCCACCACTAAGGGCTCCAAGATCTATCCACAGAGGAAAT  1037

seq1  AAATAGATTCTGTTCCAAGGAAGGAGTAGGGAATTC  1084
      ||||||||||||||||||||||||||||||||||||
seq2  AAATAGATTCTGTTCCAAGGAAGGAGTAGGGAATTC  1073