BAC Information

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BAC

Clone NameB6Ng01-258C01
Chromosome1 (Build37)
Map Location 186,393,406 - 186,394,590
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666649, 1700056E22Rik, Dusp10
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258C01.bB6Ng01-258C01.g
ACCGA063647GA063648
length1,0851,204
definitionB6Ng01-258C01.b B6Ng01-258C01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctttgtaccccatatttaatagtgtttgtttggtt
ctctggagtctaacttcttgagttctttgtatatattggatattagccct
ttatcggatttaggattggtaaagttctttccccaatctgttggttgcct
ttttgtcttattgacagtgtcttttgccttacagaagctttgcaatttta
tgagatcctgtttgtcttgatcatagcagccttatttataatagccaaga
gctggaaagaatccagatgtccctcaacagaggaatgggtacagaaaacg
tggtacatttacacaatggagtactacacagctattaaaaacaatgaatt
tatgaaattcttaggcaaatggatggatctggaggatatcatcccaagta
aggtaacccaatcacaaaagaacacacatgatatgcactcagagataagt
ggatattagcccagaacctgggactacccaatatacaattcacaaactac
atgaaactcaagaagaaggaagaccaaagtatggatacttcgatccttct
taaaaggaggatcaaaatacccatggaaggagttacatagacaatgtgta
gagcagagactgaaggaatgaccatccagagactgccccacctggggatc
catcccataaacaacgaccaaacccagacactattgtggatgtcaacaag
agcttgctaacatgagcctgataaagtcttctgagaggctctgccagtgc
ctgacaaatacagaagtggatgctcacagccatccattggatggagaaca
gggtccctagtgaaggagctagagaaagtacccaaggagctaaaggggtt
ggcagccccataggaggaacaacaatatgaactaaccagtaccctcagat
ctccctgggtctaaaccaccaacaaaagaaaacacatggtgggactcatg
ggctcaagctgcaatatgtagtagaggatggcctagttagtatcatggag
agaaggcccttggttctgtgaaggtcctatgccccagtatagggaattgc
cagggccagtaaatgggaatggggtggggttggtg
gaattccaacagtgcccaggattggctccatcaaatacatgagttttaga
gactcgagctgctgcggcaagcacttcaccagccctgttcctagtgattt
ttgaaaggcttatacagtattctgatgagaaaaattattattctaattgt
ttatcccttgcaggtaaggggcttccatcatttagcatttattttactgt
ctccagctttcaactgggagtgtgatttgtttggcttggtgtccctgcat
ttctctcttctggatttcacctggcttctgaaattagtaggctttttacc
aagttggagacactgttgattgttcttcattagagttcttttctggtctc
catctttcctctcctcagcacctgcagtgtttgcaatgcctgcagtgtct
gcctacagtgtctttagtgtctgcagtgtctgcctgcagtgtcttcaatg
tctgcagtgtatatctgcagtgcctgcagtgtctgcctgcaatgtctgca
gtgtctgtagtgtctatggtgtctacctgtagtgtcagcagtgcctgcag
tgtctgcctgcagtgtctgcattcctggtggctcactcactaactcttgt
tctagttttcaaggctaggatgcactagtcactggttttcaggttttctc
tttgttgccatttttctgtcttccatttacctggcccttgcctctgtccc
ttccccatcctgctcttcagcctagccattaagtatcttattttaattaa
ttgtattttcagtttaaattttttcatttctttttcttttgttctgagac
tttgtatttcctagttaaggctatttctataatttgtaattccagccagg
cttatatttttaacaaactatttttatgacaactgatttaaaatcttggc
taaatcatcagctgatgttagtgtctagtttttattacttaagatagagt
cttgtgctccacagcccactgcattcagcccttcgacacggtcctcatga
ccttccacacctggctatgtttgtgtcaactatctttcttgttttcattt
ggatctttcctgtttcttagtgtaatgggtgatttccactgggcaaaaaa
atagggctagccttgagtacaataccaatgttacttcaggaatcttatcc
actgttttaactgattcttcttacacacaggcctagactgtgacgagagt
aatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186393406_186394590
seq2: B6Ng01-258C01.g_82_1268

seq1  AGGATTGGCTCCATCAAATACATGAGTTTTAGAGACTCGAGCTGCTGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGGCTCCATCAAATACATGAGTTTTAGAGACTCGAGCTGCTGCGG  50

seq1  CAAGCACTTCACCAGCCCTGTTCCTAGTGATTTTTGAAAGGCTTATACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTTCACCAGCCCTGTTCCTAGTGATTTTTGAAAGGCTTATACAG  100

seq1  TATTCTGATGAGAAAAATTATTATTCTAATTGTTTATCCCTTGCAGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGATGAGAAAAATTATTATTCTAATTGTTTATCCCTTGCAGGTAA  150

seq1  GGGGCTTCCATCATTTAGCATTTATTTTACTGTCTCCAGCTTTCAACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTCCATCATTTAGCATTTATTTTACTGTCTCCAGCTTTCAACTGG  200

seq1  GAGTGTGATTTGTTTGGCTTGGTGTCCCTGCATTTCTCTCTTCTGGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGATTTGTTTGGCTTGGTGTCCCTGCATTTCTCTCTTCTGGATTT  250

seq1  CACCTGGCTTCTGAAATTAGTAGGCTTTTTACCAAGTTGGAGACACTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGCTTCTGAAATTAGTAGGCTTTTTACCAAGTTGGAGACACTGTT  300

seq1  GATTGTTCTTCATTAGAGTTCTTTTCTGGTCTCCATCTTTCCTCTCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTCTTCATTAGAGTTCTTTTCTGGTCTCCATCTTTCCTCTCCTCA  350

seq1  GCACCTGCAGTGTTTGCAATGCCTGCAGTGTCTGCCTACAGTGTCTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTGCAGTGTTTGCAATGCCTGCAGTGTCTGCCTACAGTGTCTTTAG  400

seq1  TGTCTGCAGTGTCTGCCTGCAGTGTCTTCAATGTCTGCAGTGTATATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCAGTGTCTGCCTGCAGTGTCTTCAATGTCTGCAGTGTATATCTG  450

seq1  CAGTGCCTGCAGTGTCTGCCTGCAATGTCTGCAGTGTCTGTAGTGTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCCTGCAGTGTCTGCCTGCAATGTCTGCAGTGTCTGTAGTGTCTAT  500

seq1  GGTGTCTACCTGTAGTGTCAGCAGTGCCTGCAGTGTCTGCCTGCAGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTACCTGTAGTGTCAGCAGTGCCTGCAGTGTCTGCCTGCAGTGTC  550

seq1  TGCATTCCTGGTGGCTCACTCACTAACTCTTGTTCTAGTTTTCAAGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCCTGGTGGCTCACTCACTAACTCTTGTTCTAGTTTTCAAGGCTA  600

seq1  GGATGCACTAGTCACTGGTTTTCAGGTTTTCTCTTTGTTGCCATTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCACTAGTCACTGGTTTTCAGGTTTTCTCTTTGTTGCCATTTTTCT  650

seq1  GTCTTCCATTTACCTGGCCCTTGCCTCTGTCCCTTCCCCATCCTGCTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCCATTTACCTGGCCCTTGCCTCTGTCCCTTCCCCATCCTGCTCTT  700

seq1  CAGCCTAGCCATTAAGTATCTTATTTTAATTAATTGTATTTTCAGTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAGCCATTAAGTATCTTATTTTAATTAATTGTATTTTCAGTTTAA  750

seq1  ATTTTTTCATTTCTTTTTCTTTTGTTCTGAGACTTTGTATTTCCTAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCATTTCTTTTTCTTTTGTTCTGAGACTTTGTATTTCCTAGTTA  800

seq1  AGGCTATTTCTATAATTTGTAATTCCAGCCAGGCTTATATTTTTAACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATTTCTATAATTTGTAATTCCAGCCAGGCTTATATTTTTAACAAA  850

seq1  CTATTTTTATGACAACTGATTTAAAATCTTGGCTAAATCATCAGCTGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTTATGACAACTGATTTAAAATCTTGGCTAAATCATCAGCTGATG  900

seq1  TTAGTGTCTAGTTTTTATTACTTAAGATAGAGTCTTGTGCTCCACAGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTCTAGTTTTTATTACTTAAGATAGAGTCTTGTGCTCCACAGCCC  950

seq1  ACTGCATTCAGCCCTTCGACACGGTCCTCATGACCTTCCACACCTGGCTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATTCAGCCCTTCGACACGGTCCTCATGACCTTCCACACCTGGCTA  1000

seq1  TGTTTGTGTCAACTATCTTTC-TGTTTTCAATTTGGGATC-TTCCTGTTT  1048
      ||||||||||||||||||||| ||||||||  || ||||| |||||||||
seq2  TGTTTGTGTCAACTATCTTTCTTGTTTTCA--TTTGGATCTTTCCTGTTT  1048

seq1  CTTAGTGTAATGGGTGGTTTTCACTGGGAAAAAAAAATAAGGCTAG-CTT  1097
      |||||||||||||||| ||| |||||||  ||||||||| |||||| |||
seq2  CTTAGTGTAATGGGTGATTTCCACTGGG-CAAAAAAATAGGGCTAGCCTT  1097

seq1  GAGTACAATACC-ATGTAAC-TCAGG-ATCTTATCCAAACCTGTTTTAAC  1144
      |||||||||||| |||| || ||||| ||||||||||   ||||||||||
seq2  GAGTACAATACCAATGTTACTTCAGGAATCTTATCCA---CTGTTTTAAC  1144

seq1  TGGTTTCTTCT--AACACAGGCCTA-ACAGGAGAAAGAGTAATG  1185
      | | |||||||   ||||||||||| || |     |||||||||
seq2  T-GATTCTTCTTACACACAGGCCTAGACTGTGACGAGAGTAATG  1187