BAC Information

Click to search

BAC

Clone NameB6Ng01-258P21
Chromosome1 (Build37)
Map Location 116,283,808 - 116,284,836
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC227506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258P21.bB6Ng01-258P21.g
ACCGA064290GA064291
length1,1891,022
definitionB6Ng01-258P21.b B6Ng01-258P21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttgtggctatgagaaggtgttgttccctaatttcttctcagcctgtttat
tcttttgtgtagagaaaggccattgacttgttgagtttaatttttatatt
cagctactcatcgaagctgtttatcaagattaaggagttctctgtggcat
tttaggtcacttatatactatcatatcactcgcaagggatttggacttcc
tctttgccaaatggtaatctccgtggagatatctcccct
gaattcactctctaagaaaccatgtaaaaagcaggtgtaatgtggatctc
taatctaagtactgaggagaagagagcatcacaggggcttggcaactatc
caacccaaccaaattaaaatgttctaaaatcaatatgagcccctgtctta
aaaaacaaacaaacaaaaaacaaaaaacaaacaaaacaaaaaaacaaaaa
gcaaaaaaaaaaaaaaaaaacaaagagtgaaacaaagagagatagagaga
caaagtgacagatagccaaaattagacagagatagaagataatctaataa
ggctaccatttcagaaccaagcaattctaccagaaatccaccatgtttta
cctgcagttatcttttccccatatcagaggttatatgatttttatatgaa
agtaatcatcctaaaattacattgggtaaagcctacaaggctgctctttc
cttaagagaagacaaccacagggtgtcttcttccacagagcataaggaga
tagtaatagaataatttggctgaacacaattaactatcagaaagctattc
tgtttactccatcaatttcctcacttcaaatattgtttgccaatttatta
catgagaatacaaacagcagaagacattatctaaaattatttcgtatact
taagttttggatatatatatatatatattgctggcattgtaactcctaac
agttctggaggggagaggggagatgctgacagccactgataatgtaactt
tctgttgttattctgtgattaaaagctgctggattctggtaattagttcc
tgctatttttaatcaggggattaagggtgaaaagggggatcaagagtcac
tcacttgccagatgaaaagctctgagttccttaactctttttgcacagag
agaaaggaaattgaaagaaaaaaaaaaagctaaacagagattctcaatga
ggagattcaaatggccagatggacctaagaaatatcaccttctgctacat
atgcactagagacccagctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_116283808_116284836
seq2: B6Ng01-258P21.g_66_1087 (reverse)

seq1  CAGAGCTGTGTCTCTAGTTGCATATGTAGCAGAGGTTGAATATTTCTTTA  50
      |||||||| |||||||| ||||||||||||||| | || ||||||| |||
seq2  CAGAGCTGGGTCTCTAG-TGCATATGTAGCAGAAGGTG-ATATTTC-TTA  47

seq1  GGTCCATCTTGGCCATTTGAATCTCCTCATTTGAGAATTCTCTGTTTAGC  100
      |||||||| |||||||||||||||||||| ||||||| ||||||||||||
seq2  GGTCCATC-TGGCCATTTGAATCTCCTCA-TTGAGAA-TCTCTGTTTAGC  94

seq1  TTTTTTTTTTTCTTTCAATTTCTTTTCTCTCTTGTGCAAAAAGAGTTAAG  150
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TTTTTTTTTTTCTTTCAATTTCCTTTCTCTC-TGTGCAAAAAGAGTTAAG  143

seq1  GAACTCAGAGCTTTTCATCTGGCAAGTGAGTGACTCTTGATCCCCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAGCTTTTCATCTGGCAAGTGAGTGACTCTTGATCCCCCTTTT  193

seq1  CACCCTTAATCCCCTGATTAAAAATAGCAGGAACTAATTACCAGAATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTTAATCCCCTGATTAAAAATAGCAGGAACTAATTACCAGAATCCA  243

seq1  GCAGCTTTTAATCACAGAATAACAACAGAAAGTTACATTATCAGTGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTTTTAATCACAGAATAACAACAGAAAGTTACATTATCAGTGGCTG  293

seq1  TCAGCATCTCCCCTCTCCCCTCCAGAACTGTTAGGAGTTACAATGCCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATCTCCCCTCTCCCCTCCAGAACTGTTAGGAGTTACAATGCCAGC  343

seq1  AATATATATATATATATATCCAAAACTTAAGTATACGAAATAATTTTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATATATATATATCCAAAACTTAAGTATACGAAATAATTTTAGA  393

seq1  TAATGTCTTCTGCTGTTTGTATTCTCATGTAATAAATTGGCAAACAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTTCTGCTGTTTGTATTCTCATGTAATAAATTGGCAAACAATAT  443

seq1  TTGAAGTGAGGAAATTGATGGAGTAAACAGAATAGCTTTCTGATAGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTGAGGAAATTGATGGAGTAAACAGAATAGCTTTCTGATAGTTAA  493

seq1  TTGTGTTCAGCCAAATTATTCTATTACTATCTCCTTATGCTCTGTGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCAGCCAAATTATTCTATTACTATCTCCTTATGCTCTGTGGAAG  543

seq1  AAGACACCCTGTGGTTGTCTTCTCTTAAGGAAAGAGCAGCCTTGTAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACACCCTGTGGTTGTCTTCTCTTAAGGAAAGAGCAGCCTTGTAGGCT  593

seq1  TTACCCAATGTAATTTTAGGATGATTACTTTCATATAAAAATCATATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCAATGTAATTTTAGGATGATTACTTTCATATAAAAATCATATAAC  643

seq1  CTCTGATATGGGGAAAAGATAACTGCAGGTAAAACATGGTGGATTTCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATATGGGGAAAAGATAACTGCAGGTAAAACATGGTGGATTTCTGG  693

seq1  TAGAATTGCTTGGTTCTGAAATGGTAGCCTTATTAGATTATCTTCTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGCTTGGTTCTGAAATGGTAGCCTTATTAGATTATCTTCTATCT  743

seq1  CTGTCTAATTTTGGCTATCTGTCACTTTGTCTCTCTATCTCTCTTTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAATTTTGGCTATCTGTCACTTTGTCTCTCTATCTCTCTTTGTTT  793

seq1  CACTCTTTGTTTTTTTTTTTTTTTTTTGCTTTTTGTTTTTTTGTTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTTGTTTTTTTTTTTTTTTTTTGCTTTTTGTTTTTTTGTTTTGTT  843

seq1  TGTTTTTTGTTTTTTGTTTGTTTGTTTTTTAAGACAGGGGCTCATATTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTGTTTTTTGTTTGTTTGTTTTTTAAGACAGGGGCTCATATTGA  893

seq1  TTTTAGAACATTTTAATTTGGTTGGGTTGGATAGTTGCCAAGCCCCTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGAACATTTTAATTTGGTTGGGTTGGATAGTTGCCAAGCCCCTGTG  943

seq1  ATGCTCTCTTCTCCTCAGTACTTAGATTAGAGATCCACATTACACCTGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTCTTCTCCTCAGTACTTAGATTAGAGATCCACATTACACCTGCT  993

seq1  TTTTACATGGTTTCTTAGAGAGTGAATTC  1029
      |||||||||||||||||||||||||||||
seq2  TTTTACATGGTTTCTTAGAGAGTGAATTC  1022