BAC Information

Click to search

BAC

Clone NameB6Ng01-259D22
Chromosome1 (Build37)14 (Build37)
Map Location 97,768,614 - 97,769,11037,714,143 - 37,715,236
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
Downstream geneGm1833, Slco4c1, EG329217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259D22.bB6Ng01-259D22.g
ACCGA064476GA064477
length7341,105
definitionB6Ng01-259D22.b B6Ng01-259D22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(97,768,614 - 97,769,110)(37,714,143 - 37,715,236)
sequence
gaattcctttggctaaaacctcagatgcaactcactcctggcactggatg
tatcaattggtggtgagagattgttgttgttgttgttgttgttgttgttg
ttgttgttgttgctgttgttttctttttgtgtgtgtgactgacaaagaag
atgaaattgggtgaacagaggtagggacactgttgaagaagttggaagag
agggaattataaaataaaaatatgttgcatgaacaaaatctttaaaagac
aattagttttttaattagatattttcttcattcacatttcaaatgttatc
cccttttctggtttcccctccaaaaatcccctattcactcccctctccct
gctcaccaacccacccactcccactttctgactctggcattcctctacac
tggggcattgagccttcccaggaccaagggcctctcctcccattggtaac
tgacaagttcctctgctacatatgcagctggaaccatgagtcccaccatg
tttactctttggttagtggtttagtccctgggagctctgggtgtgctggt
tggttccttttgttgtttttcctttggggctacaaaccacttcagctcct
tggatcctttctctagctcctctattggggaccctgtgctcagtccaatg
tttggctgagagcacccacccctgttatttgtcaggcactggtagagcta
tatcaagcttctgtccacaagcacttgttggtat
gaattccaaaagctcctccccctgcactggccaaagaaaatgtgcaagaa
aagggagagcagtagcaagacagcccaaggaaactacagaacaatgaact
tctaagagttaaaaaacaaccataggtaatgaactaaagacattgaaaat
taactcagctaggaaaactgggaaattcagccaaatctgctttggtttgg
atacatgttttgaatataaacaagtcacaagtaaatttaaaaactcaaca
aagcctggccataaaaatcatttgattcaatcctagctatccaagaacat
gtgtcacatgactctaagacacctgaataaatgaatataagacatctgaa
aaaaggccaagtgatgttctgtactgtaaaccaggatagacacagacaaa
ggagaaacttcagggacataaagaagaggaagctggaaacattccatgtc
ttaatgagttggtgctatataagcccaaatacaaaaagttcaatcttatg
atggataagtcttagccattctacaagctacagagagtaagaaaaagtga
aaaagcaaagtattttgtctttaaactccagagagagagagagagagaaa
gagagagagacagagagaaagagagagagagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagaggagataccatt
aaattctagctttttgatgaactgattttctagtttaaaacatcccatgt
tcaaatgattcaaagagacaaatgtcaagaaagataaagcagtgcaggat
gtgccagaggtgatgctgaggaactgagtcagaggaacacaggcacggct
gcagcagctgcaggaccactgccctccttcaatcacacaatgtttcagag
caagcacagcccgtggactgaccctgaccctgagggtggggcatttaatc
ccattgttattacaacaaccggttccattcagaattctgcagaaatgggc
acagaatatgtatttatcacagcttaaccagcatacagactgcagttaag
actatataacgtttgccaaattcctcagtattggatataatttattccta
ctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97768614_97769110
seq2: B6Ng01-259D22.b_163_666

seq1  TTTTCTTTTTGTGTGTGTGTGTATTTTAATTATTATTTTAAGATTATAAT  50
      |||||||||||||||||||        | | |  |    ||||| | |||
seq2  TTTTCTTTTTGTGTGTGTG--------ACTGACAA--AGAAGATGA-AAT  39

seq1  TTAATTTCAACATCTTTTTCTTACCTTTCTCCCTTTCAAG--CATTCCTG  98
      |     | ||||    |                    | |  || |  ||
seq2  T--GGGTGAACAGAGGT--------------------AGGGACACTGTTG  67

seq1  AATAACCTTCTCTACTCTCCTTCAAGTTCATGGCCTCTGCTTTTTTTCAC  148
      || ||               ||  |    | ||         || |  | 
seq2  AAGAA--------------GTTGGAAGAGAGGG-------AATTATAAAA  96

seq1  TAATGTTATGTGCACATATGTACATGTATATATATTCTTT--------TT  190
      |||   |||||         | ||||   | | | |||||         |
seq2  TAAAAATATGT---------TGCATG--AACAAAATCTTTAAAAGACAAT  135

seq1  TAATATTTTTATTACATATTTTCCTCAATTACATTTCCAATGCTATC---  237
      || | |||| |||| |||||||| ||| | ||||||| |||| ||||   
seq2  TAGTTTTTTAATTAGATATTTTCTTCATTCACATTTCAAATGTTATCCCC  185

seq1  ----------------CCAAAATTCCCCCATACCCTCCC----CCCCACT  267
                      |||||| ||||| || | |||||    |||  ||
seq2  TTTTCTGGTTTCCCCTCCAAAAATCCCCTATTCACTCCCCTCTCCCTGCT  235

seq1  TCCCTACCCACCCATTCCCATTTTTTTTGGCCCTGGCATTCCCCTGTACT  317
        || ||||||||| |||||   ||| || | |||||||||| ||  |||
seq2  CACCAACCCACCCACTCCCA--CTTTCTGACTCTGGCATTCCTCTACACT  283

seq1  GGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGC  367
      |||||||  |   ||  || | |||| ||||||||| | ||| || |  |
seq2  GGGGCATTGAGCCTTCCCAGGACCAA-GGGCCTCTCCTCCCATTGGTAAC  332

seq1  CGACTAGGCCATCTTTAGATACATATGCAGCTAGAGTCAAGAGCTCC---  414
       ||| ||  | |||   | ||||||||||||| ||  || |||  ||   
seq2  TGACAAGTTCCTCT---GCTACATATGCAGCTGGAACCATGAGTCCCACC  379

seq1  ------------------------------------------GGAGTACT  422
                                                || || ||
seq2  ATGTTTACTCTTTGGTTAGTGGTTTAGTCCCTGGGAGCTCTGGGTGTGCT  429

seq1  GGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCT  472
      |||| |||| |  |||||||   ||| | ||| | || | | ||| ||||
seq2  GGTTGGTTCCTTTTGTTGTTTTTCCTTTGGGGCTACAAACCACTTCAGCT  479

seq1  CCTTGGGTACTTTCTCTAGCTCCTC  497
      |||||| | ||||||||||||||||
seq2  CCTTGGATCCTTTCTCTAGCTCCTC  504

seq1: chr14_37714143_37715236
seq2: B6Ng01-259D22.g_67_1171

seq1  GAATTCCAAAAGCTCCTCCCCCTGCACTGGCCAAAGAAAATGTGCAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAGCTCCTCCCCCTGCACTGGCCAAAGAAAATGTGCAAGAA  50

seq1  AAGGGAGAGCAGTAGCAAGACAGCCCAAGGAAACTACAGAACAATGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGAGCAGTAGCAAGACAGCCCAAGGAAACTACAGAACAATGAACT  100

seq1  TCTAAGAGTTAAAAAACAACCATAGGTAATGAACTAAAGACATTGAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAGTTAAAAAACAACCATAGGTAATGAACTAAAGACATTGAAAAT  150

seq1  TAACTCAGCTAGGAAAACTGGGAAATTCAGCCAAATCTGCTTTGGTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAGCTAGGAAAACTGGGAAATTCAGCCAAATCTGCTTTGGTTTGG  200

seq1  ATACATGTTTTGAATATAAACAAGTCACAAGTAAATTTAAAAACTCAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTTTTGAATATAAACAAGTCACAAGTAAATTTAAAAACTCAACA  250

seq1  AAGCCTGGCCATAAAAATCATTTGATTCAATCCTAGCTATCCAAGAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGCCATAAAAATCATTTGATTCAATCCTAGCTATCCAAGAACAT  300

seq1  GTGTCACATGACTCTAAGACACCTGAATAAATGAATATAAGACATCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACATGACTCTAAGACACCTGAATAAATGAATATAAGACATCTGAA  350

seq1  AAAAGGCCAAGTGATGTTCTGTACTGTAAACCAGGATAGACACAGACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCAAGTGATGTTCTGTACTGTAAACCAGGATAGACACAGACAAA  400

seq1  GGAGAAACTTCAGGGACATAAAGAAGAGGAAGCTGGAAACATTCCATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAACTTCAGGGACATAAAGAAGAGGAAGCTGGAAACATTCCATGTC  450

seq1  TTAATGAGTTGGTGCTATATAAGCCCAAATACAAAAAGTTCAATCTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAGTTGGTGCTATATAAGCCCAAATACAAAAAGTTCAATCTTATG  500

seq1  ATGGATAAGTCTTAGCCATTCTACAAGCTACAGAGAGTAAGAAAAAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAAGTCTTAGCCATTCTACAAGCTACAGAGAGTAAGAAAAAGTGA  550

seq1  AAAAGCAAAGTATTTTGTCTTTAAACTCCAGAGAGAGAGAGAGAGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAAAGTATTTTGTCTTTAAACTCCAGAGAGAGAGAGAGAGAGAAA  600

seq1  GAGAGAGAGACAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  650
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  GAGAGAGAGACAGAGAGAA--AGAGAGAGAGAGAGAGAGAGAGAGAGAGA  648

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGATACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGATACCA  698

seq1  TTAAATTCTAGCTTTTTGATGAACTGATTTTCTAGTTTAAAACATCCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCTAGCTTTTTGATGAACTGATTTTCTAGTTTAAAACATCCCAT  748

seq1  GTTC-AATGATTCAAAGAGAC-AATGTCAAGAAAGATAAAGCAGTGCAGG  798
      |||| |||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTTCAAATGATTCAAAGAGACAAATGTCAAGAAAGATAAAGCAGTGCAGG  798

seq1  ATGTGCCAGAGGTGATGCTGAGGAACTGAGTCAGAGGAACACA-GCACGG  847
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATGTGCCAGAGGTGATGCTGAGGAACTGAGTCAGAGGAACACAGGCACGG  848

seq1  CTGCAGCAGCTGCAGGACCACTG-CCTCC-TCAATCACAC-ATG-TTCAG  893
      ||||||||||||||||||||||| ||||| |||||||||| ||| |||||
seq2  CTGCAGCAGCTGCAGGACCACTGCCCTCCTTCAATCACACAATGTTTCAG  898

seq1  AGCAAGCACAG-CCGTGGACTGA-CCTGA-CCTGA-GGTGGGGCATTTAA  939
      ||||||||||| ||||||||||| ||||| ||||| ||||||||||||||
seq2  AGCAAGCACAGCCCGTGGACTGACCCTGACCCTGAGGGTGGGGCATTTAA  948

seq1  TCCATTTGTTA-TACAACAAACGGTT-CAATCAGAA-TCTGCAGAAATGG  986
      |||  |||||| |||||||| ||||| || |||||| |||||||||||||
seq2  TCCCATTGTTATTACAACAACCGGTTCCATTCAGAATTCTGCAGAAATGG  998

seq1  GCCACAGAATATGTATTTAGCAAAGCTTAACAAGCAATACAGACTGCAGT  1036
      | ||||||||||||||||| || |||||||| ||| ||||||||||||||
seq2  G-CACAGAATATGTATTTATCACAGCTTAACCAGC-ATACAGACTGCAGT  1046

seq1  TAAGACTTATA-AACATTTGCCAAATT-CTCAGCATTGGATAAATTTCAT  1084
      |||||| |||| ||| ||||||||||| ||||| |||||||| | || ||
seq2  TAAGAC-TATATAACGTTTGCCAAATTCCTCAGTATTGGATATAATTTAT  1095

seq1  TTCTACTGGG  1094
      | ||||||||
seq2  TCCTACTGGG  1105