BAC Information

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BAC

Clone NameB6Ng01-259J18
Chromosome1 (Build37)
Map Location 148,617,974 - 148,618,498
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259J18.bB6Ng01-259J18.g
ACCGA064747GA064748
length5191,220
definitionB6Ng01-259J18.b B6Ng01-259J18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agcaataggtaaaatgaagagcaggccttagttgagctgtggtaaatata
gaatatgcaaactgcatttctttttatctaggatatagggtcatttccca
ttgcaggactgtcacgctggtcttgacttctacagaaatttgaaccagaa
atgtatggataaatacaagtccctagtgaaaagcctaatcttgtagcatt
gacctaatggcttatggagatatcgatgacactgaagagtgtctgcaatt
ggaataataacacaagtattgagaaaataatgggtaaaatgttatctgca
gtagctagaaaataatattttcaacaatatttggacttggtgaagaaaaa
tcagttctgtttctgacaacactttgtagtcaggtgttgcccagaattgt
tctatgtgacaatgagatgttcttccacatgataacaggactgttagccc
atgttcttggattaaaaagatgaagaatccctatggtcaataagccatgg
ggcgggggggtggggagga

gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgattgattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggcttttttttggctgggagactattaataactgcttctatttc
tttaggggatatgggactgtttagaaggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtatagccttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtgtagctaagggttttatc
tatcttgttgattttctcaaagaaccaactcctcgtttggttaatttctt
tgaatagttcttcttgtttccacttgggttgatttcacccctgagtttga
ttatttcctgccgtctactcctcttgggtgaatttgcttccttttttttc
tagagcttttagatgtgttgtcaagctgctagtatgtgctctctcccgtt
ttttcttgaaggcactcatagctatgagtttccctcttagaaatgctttc
attgtgtccaaaggtttgggtacgttggtggctttcatttcataactcta
aaagtctttagttctttctttattccttccctgaccaggtatcatgagaa
gaaggtgttggttccagtccaatggtgaatgttgccttctggttatctat
ttggtcatttgaaagaatcagtcctttaaggcatgggtgtgactctgagg
taggtggtacatactgcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148617974_148618498
seq2: B6Ng01-259J18.b_46_570 (reverse)

seq1  TCCTCCCCACCCCCCCGCCCCATGGCTTATTGACCATAGGGATTCTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCCACCCCCCCGCCCCATGGCTTATTGACCATAGGGATTCTTCAT  50

seq1  CTTTTTAATCCAAGAACATGGGCTAACAGTCCTGTTATCATGTGGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAATCCAAGAACATGGGCTAACAGTCCTGTTATCATGTGGAAGAA  100

seq1  CATCTCATTGTCACATAGAACAATTCTGGGCAACACCTGACTACAAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATTGTCACATAGAACAATTCTGGGCAACACCTGACTACAAAGTG  150

seq1  TTGTCAGAAACAGAACTGATTTTTCTTCACCAAGTCCAAATATTGTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAAACAGAACTGATTTTTCTTCACCAAGTCCAAATATTGTTGAA  200

seq1  AATATTATTTTCTAGCTACTGCAGATAACATTTTACCCATTATTTTCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTATTTTCTAGCTACTGCAGATAACATTTTACCCATTATTTTCTCA  250

seq1  ATACTTGTGTTATTATTCCAATTGCAGACACTCTTCAGTGTCATCGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGTGTTATTATTCCAATTGCAGACACTCTTCAGTGTCATCGATAT  300

seq1  CTCCATAAGCCATTAGGTCAATGCTACAAGATTAGGCTTTTCACTAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAAGCCATTAGGTCAATGCTACAAGATTAGGCTTTTCACTAGGGA  350

seq1  CTTGTATTTATCCATACATTTCTGGTTCAAATTTCTGTAGAAGTCAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTTATCCATACATTTCTGGTTCAAATTTCTGTAGAAGTCAAGAC  400

seq1  CAGCGTGACAGTCCTGCAATGGGAAATGACCCTATATCCTAGATAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTGACAGTCCTGCAATGGGAAATGACCCTATATCCTAGATAAAAAG  450

seq1  AAATGCAGTTTGCATATTCTATATTTACCACAGCTCAACTAAGGCCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGTTTGCATATTCTATATTTACCACAGCTCAACTAAGGCCTGCT  500

seq1  CTTCATTTTACCTATTGCTGAATTC  525
      |||||||||||||||||||||||||
seq2  CTTCATTTTACCTATTGCTGAATTC  525


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