BAC Information

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BAC

Clone NameB6Ng01-260K01
Chromosome1 (Build37)
Map Location 31,150,927 - 31,181,625
singlet/doubletdoublet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616
Downstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056, LOC100041238
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260K01.bB6Ng01-260K01.g
ACCGA065502GA065503
length917968
definitionB6Ng01-260K01.b B6Ng01-260K01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,180,709 - 31,181,625)(31,150,927 - 31,151,886)
sequence
gaattctgtgaaactagatgttccttgatgtaatgattcttaaacaatta
aaaattgaggcatgggacacagcacagcacaacatagtcctaatggccca
ggtgcatgctgtgtgttctcattttggaaacaatgtaataactgcacaat
ggtagttccagattaatgcttgatttgcaaagaaagtttgaagaaattat
tagaaaattaaatagagccaacattgggaccccaagaaagaaaaaaaact
ttgaaataagttataaaataagttttgcacaacatgagagtggttcctgg
ataagcacatataggatatgtaaaatcttatattagtaaaactaagtcaa
accacggactcttaggagtatcattgtatacagaaacagaaagctaatgg
aactactgagtcaagagttaacttgattctttctggccactgcccggcag
cttttgttcatgacatttatcattagagcttcacaggaaaatgcatgtag
ctggcctcagagctctgaagtataataagctaaagtttaaataatgataa
actgcaattattattattattattttggttatagccctgggaatagggaa
gcttgaaactttggggaaaaattgtaattcttgattctttgtgggacgtg
gttattcttttgaatttaatttggcaatgattgtacaaggtctttttcta
cctgtttttggagtatcaataaaagactagggcaagagaaaggcaagaga
gcgagtagagagcatgtagagagcgagcgaggagtgtgaggtgaatgtag
agagggaatgaagagagagagagaaagagaaagcatgagaaaaatatgtg
aagagtgagtgaagagagaatgtgaggcttgtatggagagtgtgtgcgtg
agtgaaaggagagtgca

gaattcaagggaggattcagatgtggaaaatacccagaaggagacagaat
caaacattattgcacaataaagggtggggactcagggaattaggtcatca
cattcccagattctaacactattacataattactaaagctctcccaaatt
attttaaaataaagaaaggtaaggcctcctttataaaacaagatagcctg
tcacagtggcacatgcctgtggtgccagaaggcagcaacaggaaggccag
gagttcaaggttgtcttcatagttagagacccacacggactacttgaggg
aggaagggagggacacacacatgtatatggaattcatcctatatgatcaa
gtaaatctagggtaaaatttaaaactcagaattgtgattgtcaatttatt
gtgtaatttgctaaacatttgggcagctggagtagtttccaaggctttcc
atactaacactcacggaacaacaaacatagtcacctctggtggcagaaaa
ggtatgtttctcgtcttttgggaatactgaagtgattgacatctttctgt
cctgtatgaagacagttgtagaacatgagcttctatttctggcttccatt
ttaggtcagcctcagagagcggtgtgcataattaccgaaaacactgttga
caatttgaatttataattgttaacacctgggacgatagcctgagcttaga
agacaccaacttctgagagcagcctgctaagtaattcttgatgctttatt
acacactgtgactaagcagagggcactcacacagctactaaggccctacc
gtgagctttacattaatagtaacaggaaagtgagcctaattagtctcttc
cactaaagtatttgaaaatttttccattgcccataccatccccataatgg
aaaatacttctgcagctaaggatgagtaaatatttgagttgtgctctaac
ctgaatttcagtgtcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31180709_31181625
seq2: B6Ng01-260K01.b_46_962 (reverse)

seq1  TGCACTCTCCTTTCACTCACGCACACACTCTCCATACAAGCCTCACATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCTCCTTTCACTCACGCACACACTCTCCATACAAGCCTCACATTC  50

seq1  TCTCTTCACTCACTCTTCACATATTTTTCTCATGCTTTCTCTTTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCACTCACTCTTCACATATTTTTCTCATGCTTTCTCTTTCTCTCT  100

seq1  CTCTCTTCATTCCCTCTCTACATTCACCTCACACTCCTCGCTCGCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCATTCCCTCTCTACATTCACCTCACACTCCTCGCTCGCTCTCT  150

seq1  ACATGCTCTCTACTCGCTCTCTTGCCTTTCTCTTGCCCTAGTCTTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTCTCTACTCGCTCTCTTGCCTTTCTCTTGCCCTAGTCTTTTATT  200

seq1  GATACTCCAAAAACAGGTAGAAAAAGACCTTGTACAATCATTGCCAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCAAAAACAGGTAGAAAAAGACCTTGTACAATCATTGCCAAATT  250

seq1  AAATTCAAAAGAATAACCACGTCCCACAAAGAATCAAGAATTACAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAAAAGAATAACCACGTCCCACAAAGAATCAAGAATTACAATTTT  300

seq1  TCCCCAAAGTTTCAAGCTTCCCTATTCCCAGGGCTATAACCAAAATAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAAAGTTTCAAGCTTCCCTATTCCCAGGGCTATAACCAAAATAATA  350

seq1  ATAATAATAATTGCAGTTTATCATTATTTAAACTTTAGCTTATTATACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATAATTGCAGTTTATCATTATTTAAACTTTAGCTTATTATACTT  400

seq1  CAGAGCTCTGAGGCCAGCTACATGCATTTTCCTGTGAAGCTCTAATGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCTGAGGCCAGCTACATGCATTTTCCTGTGAAGCTCTAATGATA  450

seq1  AATGTCATGAACAAAAGCTGCCGGGCAGTGGCCAGAAAGAATCAAGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATGAACAAAAGCTGCCGGGCAGTGGCCAGAAAGAATCAAGTTAA  500

seq1  CTCTTGACTCAGTAGTTCCATTAGCTTTCTGTTTCTGTATACAATGATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGACTCAGTAGTTCCATTAGCTTTCTGTTTCTGTATACAATGATAC  550

seq1  TCCTAAGAGTCCGTGGTTTGACTTAGTTTTACTAATATAAGATTTTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGAGTCCGTGGTTTGACTTAGTTTTACTAATATAAGATTTTACAT  600

seq1  ATCCTATATGTGCTTATCCAGGAACCACTCTCATGTTGTGCAAAACTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATATGTGCTTATCCAGGAACCACTCTCATGTTGTGCAAAACTTAT  650

seq1  TTTATAACTTATTTCAAAGTTTTTTTTCTTTCTTGGGGTCCCAATGTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAACTTATTTCAAAGTTTTTTTTCTTTCTTGGGGTCCCAATGTTGG  700

seq1  CTCTATTTAATTTTCTAATAATTTCTTCAAACTTTCTTTGCAAATCAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTAATTTTCTAATAATTTCTTCAAACTTTCTTTGCAAATCAAGC  750

seq1  ATTAATCTGGAACTACCATTGTGCAGTTATTACATTGTTTCCAAAATGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCTGGAACTACCATTGTGCAGTTATTACATTGTTTCCAAAATGAG  800

seq1  AACACACAGCATGCACCTGGGCCATTAGGACTATGTTGTGCTGTGCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACAGCATGCACCTGGGCCATTAGGACTATGTTGTGCTGTGCTGTG  850

seq1  TCCCATGCCTCAATTTTTAATTGTTTAAGAATCATTACATCAAGGAACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGCCTCAATTTTTAATTGTTTAAGAATCATTACATCAAGGAACAT  900

seq1  CTAGTTTCACAGAATTC  917
      |||||||||||||||||
seq2  CTAGTTTCACAGAATTC  917


seq1: chr1_31150927_31151886
seq2: B6Ng01-260K01.g_65_1032

seq1  GAATTCAAGGGAGGATTCAGATGTGGAAAATACCCAGAAGGAGACAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGAGGATTCAGATGTGGAAAATACCCAGAAGGAGACAGAAT  50

seq1  CAAACATTATTGCACAATAAAGGGTGGGGACTCAGGGAATTAGGTCATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTATTGCACAATAAAGGGTGGGGACTCAGGGAATTAGGTCATCA  100

seq1  CATTCCCAGATTCTAACACTATTACATAATTACTAAAGCTCTCCCAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCAGATTCTAACACTATTACATAATTACTAAAGCTCTCCCAAATT  150

seq1  ATTTTAAAATAAAGAAAGGTAAGGCCTCCTTTATAAAACAAGATAGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATAAAGAAAGGTAAGGCCTCCTTTATAAAACAAGATAGCCTG  200

seq1  TCACAGTGGCACATGCCTGTGGTGCCAGAAGGCAGCAACAGGAAGGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTGGCACATGCCTGTGGTGCCAGAAGGCAGCAACAGGAAGGCCAG  250

seq1  GAGTTCAAGGTTGTCTTCATAGTTAGAGACCCACACGGACTACTTGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAAGGTTGTCTTCATAGTTAGAGACCCACACGGACTACTTGAGGG  300

seq1  AGGAAGGGAGGGACACACACATGTATATGGAATTCATCCTATATGATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGAGGGACACACACATGTATATGGAATTCATCCTATATGATCAA  350

seq1  GTAAATCTAGGGTAAAATTTAAAACTCAGAATTGTGATTGTCAATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCTAGGGTAAAATTTAAAACTCAGAATTGTGATTGTCAATTTATT  400

seq1  GTGTAATTTGCTAAACATTTGGGCAGCTGGAGTAGTTTCCAAGGCTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATTTGCTAAACATTTGGGCAGCTGGAGTAGTTTCCAAGGCTTTCC  450

seq1  ATACTAACACTCACGGAACAACAAACATAGTCACCTCTGGTGGCAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAACACTCACGGAACAACAAACATAGTCACCTCTGGTGGCAGAAAA  500

seq1  GGTATGTTTCTCGTCTTTTGGGAATACTGAAGTGATTGACATCTTTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGTTTCTCGTCTTTTGGGAATACTGAAGTGATTGACATCTTTCTGT  550

seq1  CCTGTATGAAGACAGTTGTAGAACATGAGCTTCTATTTCTGGCTTCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATGAAGACAGTTGTAGAACATGAGCTTCTATTTCTGGCTTCCATT  600

seq1  TTAGGTCAGCCTCAGAGAGCGGTGTGCATAATTACCGAAAACACTGTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCAGCCTCAGAGAGCGGTGTGCATAATTACCGAAAACACTGTTGA  650

seq1  CAATTTGAA-TTATAATTGTTAACACCTGGGACGATAGCCTGAGCTTAGA  699
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGAATTTATAATTGTTAACACCTGGGACGATAGCCTGAGCTTAGA  700

seq1  AGACACCAACTTCTGAGAGCAGCCTGCTAAGTAATTCTTGATGCTTTATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCAACTTCTGAGAGCAGCCTGCTAAGTAATTCTTGATGCTTTATT  750

seq1  ACACACTGTGACTAAGCAGA-GGCACTCACACAGC-ACTAAGGCCCTACC  797
      |||||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  ACACACTGTGACTAAGCAGAGGGCACTCACACAGCTACTAAGGCCCTACC  800

seq1  GTGAGCTTTACA-TAATAGTAACAGGAAAGTGAGCCTAATTAGTCTCTTC  846
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTTTACATTAATAGTAACAGGAAAGTGAGCCTAATTAGTCTCTTC  850

seq1  CACTAAAAGTATTTGAAAATTTTTCCATTGCCCAATACCAT-CCCATAAT  895
      |||| |||||||||||||||||||||||||||| ||||||| ||||||||
seq2  CACT-AAAGTATTTGAAAATTTTTCCATTGCCC-ATACCATCCCCATAAT  898

seq1  GGAAAATAC-TCTGCAGC-AAGGATGAGTAAATATTTGAGTTGTGCT-TA  942
      ||||||||| |||||||| |||||||||||||||||||||||||||| ||
seq2  GGAAAATACTTCTGCAGCTAAGGATGAGTAAATATTTGAGTTGTGCTCTA  948

seq1  A-CTG-ATTTCAGTGTCATA  960
      | ||| ||||||||||||||
seq2  ACCTGAATTTCAGTGTCATA  968


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