BAC Information

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BAC

Clone NameB6Ng01-261A23
Chromosome1 (Build37)
Map Location 130,879,945 - 131,020,667
singlet/doubletdoublet
Overlap genenone
Upstream geneZranb3, LOC666778, LOC100042670, EG666784, R3hdm1, LOC667109, LOC100042111, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneLOC100042732, Thsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261A23.bB6Ng01-261A23.g
ACCGA065824GA065825
length126693
definitionB6Ng01-261A23.b B6Ng01-261A23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,020,542 - 131,020,667)(130,879,945 - 130,880,637)
sequence
tatatatgcaaaaaggtaccttttaaagatgtgtgtgtgtgtgtgtgtgt
gtggagagagagagagagagagagagagagagagagagagagagagagag
agagagagagagagaggggtatgggc
gaattccaccaatggccgcttactggaaatgtaagctgaaacaaaccctt
tcctctgctgttgtttttggtcaaagtgttttatcagagcaatgggaaac
aaaccagaacaatgggcatggtgggtcaggcttgtgatcgcagtgttgat
aaggcagagataggcagatctctagggcttgctgggcagccagcctagcc
tacttggcagtctgcagagcagttagaatctctgccttacaaaacaagat
aggggtctggagaaatggcttagagattgagagcactgtccgctcttcca
gatgaccctggttggatgccagcacccagatgacagatcacagccatctg
taactctattctcaggagtttcaaccccctcttctggctttaatggactc
tgaatgcatgtggttcacagacatatgcaatcaaaaccagacatacacat
aaatattaaaataaaaacagaagaaagagaacaaggaggagcttgtgtgg
gcagccgtattgaagcggcaccatgacagtagcttccctctgatttgtag
gaaagagggagaattagacttctctggggatgagccaagtggtcagctct
gaagtcatatacatataagcagcactacataggcctaacaggttgtattt
atataggattgtgtttgtgtatatgtgtgtatatatacgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131020542_131020667
seq2: B6Ng01-261A23.b_49_174 (reverse)

seq1  GCCCATACCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATACCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50

seq1  CTCTCTCTCTCTCTCTCTCTCTCCACACACACACACACACACACACATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCCACACACACACACACACACACACATCT  100

seq1  TTAAAAGGTACCTTTTTGCATATATA  126
      ||||||||||||||||||||||||||
seq2  TTAAAAGGTACCTTTTTGCATATATA  126

seq1: chr1_130879945_130880637
seq2: B6Ng01-261A23.g_69_761

seq1  GAATTCCACCAATGGCCGCTTACTGGAAATGTAAGCTGAAACAAACCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCAATGGCCGCTTACTGGAAATGTAAGCTGAAACAAACCCTT  50

seq1  TCCTCTGCTGTTGTTTTTGGTCAAAGTGTTTTATCAGAGCAATGGGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCTGTTGTTTTTGGTCAAAGTGTTTTATCAGAGCAATGGGAAAC  100

seq1  AAACCAGAACAATGGGCATGGTGGGTCAGGCTTGTGATCGCAGTGTTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAGAACAATGGGCATGGTGGGTCAGGCTTGTGATCGCAGTGTTGAT  150

seq1  AAGGCAGAGATAGGCAGATCTCTAGGGCTTGCTGGGCAGCCAGCCTAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAGATAGGCAGATCTCTAGGGCTTGCTGGGCAGCCAGCCTAGCC  200

seq1  TACTTGGCAGTCTGCAGAGCAGTTAGAATCTCTGCCTTACAAAACAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGCAGTCTGCAGAGCAGTTAGAATCTCTGCCTTACAAAACAAGAT  250

seq1  AGGGGTCTGGAGAAATGGCTTAGAGATTGAGAGCACTGTCCGCTCTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCTGGAGAAATGGCTTAGAGATTGAGAGCACTGTCCGCTCTTCCA  300

seq1  GATGACCCTGGTTGGATGCCAGCACCCAGATGACAGATCACAGCCATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCCTGGTTGGATGCCAGCACCCAGATGACAGATCACAGCCATCTG  350

seq1  TAACTCTATTCTCAGGAGTTTCAACCCCCTCTTCTGGCTTTAATGGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTATTCTCAGGAGTTTCAACCCCCTCTTCTGGCTTTAATGGACTC  400

seq1  TGAATGCATGTGGTTCACAGACATATGCAATCAAAACCAGACATACACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCATGTGGTTCACAGACATATGCAATCAAAACCAGACATACACAT  450

seq1  AAATATTAAAATAAAAACAGAAGAAAGAGAACAAGGAGGAGCTTGTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAAAATAAAAACAGAAGAAAGAGAACAAGGAGGAGCTTGTGTGG  500

seq1  GCAGCCGTATTGAAGCGGCACCATGACAGTAGCTTCCCTCTGATTTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCGTATTGAAGCGGCACCATGACAGTAGCTTCCCTCTGATTTGTAG  550

seq1  GAAAGAGGGAGAATTAGACTTCTCTGGGGATGAGCCAAGTGGTCAGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGGAGAATTAGACTTCTCTGGGGATGAGCCAAGTGGTCAGCTCT  600

seq1  GAAGTCATATACATATAAGCAGCACTACATAGGCCTAACAGGTTGTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCATATACATATAAGCAGCACTACATAGGCCTAACAGGTTGTATTT  650

seq1  ATATAGGATTGTGTTTGTGTATATGTGTGTATATATACGTATA  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGGATTGTGTTTGTGTATATGTGTGTATATATACGTATA  693