BAC Information

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BAC

Clone NameB6Ng01-261L06
Chromosome1 (Build37)
Map Location 128,800,954 - 128,998,312
singlet/doubletdoublet
Overlap geneLOC383559
Upstream geneLypd1, E030049G20Rik
Downstream geneMgat5, LOC667090, Tmem163, Acmsd, Ccnt2, Ysk4, Rab3gap1, Zranb3, LOC666778, LOC100042670, EG666784
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261L06.bB6Ng01-261L06.g
ACCGA066305GA066306
length1,144560
definitionB6Ng01-261L06.b B6Ng01-261L06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,997,168 - 128,998,312)(128,800,954 - 128,801,511)
sequence
gaattccagtcatgcttggtctacataatgagttccaggacacccagggc
taaatagagacaccggtcttaaacaaaaacaaaaacaaacaaacaaacaa
acaaacacacacaaaaaataaagctgaccatcagcacttctttctcttga
tgtgtgcaacaaagccttgcctcagtcagatggacacaggaaggaaaaca
cagaaacacaacaacacagcaacatacttcaaaatccctgcccacttctt
gtaatcagacacacacatttccacataatcaggattctttgtcacatgat
ttctaaaatttttcacttatttatttatatgtcataagtactgtttctat
accattaaatactttctttcaatataattttacagctatgtaatgggaac
aaaaattatttgatttctctagagtatggtaacactctagaatggttttg
ttgttagattaaagaaacccatcaatggactttgttttcttcaagtattt
tattgtttacttatgtgggtatgtgcatgtaagtgtggtgcccatagaga
ccagaagagggcatcagactacctggggttacaggcagtgtaaagcactc
tttatggttgctggaattgaacttggtcttcagcaagagaagcaagggat
gctaagagctgagtcatctctctagtccttcaatgtggttttggtttgct
aagaaagagggtcagacgtttgagatagggagaaggtagatatggtgaga
attccttctttctgggccatgatcaagggcaggtaggcctagggctcacc
acagtgcctgtaagagttgtcagcagggccagtgtcagaggcatagctgc
atgttgtcacccgaggcacctggaggagctccattaaactggatccttta
gctaggcctcagagtagaatttagtatgaaccagagtttggattttttta
aaagacattttaaaatgtaagtttagcacagcgttagaagaaaagaggct
aaagaaaaagacatgaagaatggatgtgtgcttcagagacgagtcatggc
cacttgtttacttataggcaggtacagggattgcgatttcttaggttatt
taatcatctatcaatcttgtccattcatcatccatctgctattc

gaattccaactctgagttctttttccatgagttacttaagcctccacaca
gcaagctctgaatgtgttagcagtggctttttgcgactattggttctagg
aatataaataagaaaccagctaacaatggtaatgctttgttttgaccaaa
gaaaagttcttgataaatggcagggaattacgcgccttggactctttaag
ttgtcttatttttttatttaaagggggagaaataaaccaaagcaatgcag
ctaagtgatcatatgacatgttgagatcattcaagtagagggacagaaag
aaaatcagacctaattgtctcatttccaaagtcctttctaggtgacaaat
tcaactggcagaaggcccttgagggtcactggtgaatccaggtcacacat
gacattgggcactcaaaggcagacatagccaccatgcccttgaaaccaag
agagcacaggaagacacagagggagagagagagagagagagagagagaga
gagagagagagagagagagagagagagagagagagagaactgagccgggg
ccataaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_128997168_128998312
seq2: B6Ng01-261L06.b_47_1190 (reverse)

seq1  GGATAGACAGATGGATGGATGGATGGAC-AGATGGATAGATGATTAAATA  49
      | |||| ||||||||| |||| |||||| |||| ||||||||||||||||
seq2  GAATAG-CAGATGGAT-GATGAATGGACAAGATTGATAGATGATTAAATA  48

seq1  ACATAAGAAATCAGCAAACCCCTGTACCTGCCTAT-AGTAAACAAGGTGG  98
      || ||||||||| || || |||||||||||||||| ||||||||||   |
seq2  ACCTAAGAAATC-GC-AATCCCTGTACCTGCCTATAAGTAAACAAG--TG  94

seq1  GCCATGACTCGTCTCTGAAGCACACATCCATTCTTCATGTC-TTTTCTAT  147
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  GCCATGACTCGTCTCTGAAGCACACATCCATTCTTCATGTCTTTTTCTTT  144

seq1  AGCCTC-TTTCTTCTAACGCTGGTGCTTAACTTACATTTTAAAATGTCTT  196
      |||||| |||||||||||||| ||||| ||||||||||||||||||||||
seq2  AGCCTCTTTTCTTCTAACGCT-GTGCTAAACTTACATTTTAAAATGTCTT  193

seq1  TTAAAAAATTCC-AACTCTGGTTCATACTAAATTCTACTCTGAGGCCTAG  245
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAATCCAAACTCTGGTTCATACTAAATTCTACTCTGAGGCCTAG  243

seq1  CTAAA-GATCCAGTTTAATGGAGCTCCTCCAGGTGCCTCGGGTGACAACA  294
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGGATCCAGTTTAATGGAGCTCCTCCAGGTGCCTCGGGTGACAACA  293

seq1  TGCAGCTATGCCTCTGACACTGGCCCTGCTGACAACTCTTACAGGCACTG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTATGCCTCTGACACTGGCCCTGCTGACAACTCTTACAGGCACTG  343

seq1  TGGTGAGCCCTAGGCCTACCTGCCCTTGATCATGGCCCAGAAAGAAGGAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCCCTAGGCCTACCTGCCCTTGATCATGGCCCAGAAAGAAGGAA  393

seq1  TTCTCACCATATCTACCTTCTCCCTATCTCAAACGTCTGACCCTCTTTCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCATATCTACCTTCTCCCTATCTCAAACGTCTGACCCTCTTTCT  443

seq1  TAGCAAACCAAAACCACATTGAAGGACTAGAGAGATGACTCAGCTCTTAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACCAAAACCACATTGAAGGACTAGAGAGATGACTCAGCTCTTAG  493

seq1  CATCCCTTGCTTCTCTTGCTGAAGACCAAGTTCAATTCCAGCAACCATAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTTGCTTCTCTTGCTGAAGACCAAGTTCAATTCCAGCAACCATAA  543

seq1  AGAGTGCTTTACACTGCCTGTAACCCCAGGTAGTCTGATGCCCTCTTCTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCTTTACACTGCCTGTAACCCCAGGTAGTCTGATGCCCTCTTCTG  593

seq1  GTCTCTATGGGCACCACACTTACATGCACATACCCACATAAGTAAACAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTATGGGCACCACACTTACATGCACATACCCACATAAGTAAACAAT  643

seq1  AAAATACTTGAAGAAAACAAAGTCCATTGATGGGTTTCTTTAATCTAACA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTTGAAGAAAACAAAGTCCATTGATGGGTTTCTTTAATCTAACA  693

seq1  ACAAAACCATTCTAGAGTGTTACCATACTCTAGAGAAATCAAATAATTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCATTCTAGAGTGTTACCATACTCTAGAGAAATCAAATAATTTT  743

seq1  TGTTCCCATTACATAGCTGTAAAATTATATTGAAAGAAAGTATTTAATGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCATTACATAGCTGTAAAATTATATTGAAAGAAAGTATTTAATGG  793

seq1  TATAGAAACAGTACTTATGACATATAAATAAATAAGTGAAAAATTTTAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAACAGTACTTATGACATATAAATAAATAAGTGAAAAATTTTAGA  843

seq1  AATCATGTGACAAAGAATCCTGATTATGTGGAAATGTGTGTGTCTGATTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGTGACAAAGAATCCTGATTATGTGGAAATGTGTGTGTCTGATTA  893

seq1  CAAGAAGTGGGCAGGGATTTTGAAGTATGTTGCTGTGTTGTTGTGTTTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGTGGGCAGGGATTTTGAAGTATGTTGCTGTGTTGTTGTGTTTCT  943

seq1  GTGTTTTCCTTCCTGTGTCCATCTGACTGAGGCAAGGCTTTGTTGCACAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCCTTCCTGTGTCCATCTGACTGAGGCAAGGCTTTGTTGCACAC  993

seq1  ATCAAGAGAAAGAAGTGCTGATGGTCAGCTTTATTTTTTGTGTGTGTTTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAGAAAGAAGTGCTGATGGTCAGCTTTATTTTTTGTGTGTGTTTG  1043

seq1  TTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTAAGACCGGTGTCTCTATTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTAAGACCGGTGTCTCTATTT  1093

seq1  AGCCCTGGGTGTCCTGGAACTCATTATGTAGACCAAGCATGACTGGAATT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGGTGTCCTGGAACTCATTATGTAGACCAAGCATGACTGGAATT  1143

seq1  C  1145
      |
seq2  C  1144


seq1: chr1_128800954_128801511
seq2: B6Ng01-261L06.g_71_630

seq1  GAATTCCAACTCTGAGTTCTTTTTCCATGAGTTACTTAAGCCTCCACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTCTGAGTTCTTTTTCCATGAGTTACTTAAGCCTCCACACA  50

seq1  GCAAGCTCTGAATGTGTTAGCAGTGGCTTTTTGCGACTATTGGTTCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTCTGAATGTGTTAGCAGTGGCTTTTTGCGACTATTGGTTCTAGG  100

seq1  AATATAAATAAGAAACCAGCTAACAATGGTAATGCTTTGTTTTGACCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAATAAGAAACCAGCTAACAATGGTAATGCTTTGTTTTGACCAAA  150

seq1  GAAAAGTTCTTGATAAATGGCAGGGAATTACGCGCCTTGGACTCTTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTCTTGATAAATGGCAGGGAATTACGCGCCTTGGACTCTTTAAG  200

seq1  TTGTCTTATTTTTTTATTTAAAGGGGGAGAAATAAACCAAAGCAATGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTATTTTTTTATTTAAAGGGGGAGAAATAAACCAAAGCAATGCAG  250

seq1  CTAAGTGATCATATGACATGTTGAGATCATTCAAGTAGAGGGACAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGATCATATGACATGTTGAGATCATTCAAGTAGAGGGACAGAAAG  300

seq1  AAAATCAGACCTAATTGTCTCATTTCCAAAGTCCTTTCTAGGTGACAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAGACCTAATTGTCTCATTTCCAAAGTCCTTTCTAGGTGACAAAT  350

seq1  TCAACTGGCAGAAGGCCCTTGAGGGTCACTGGTGAATCCAGGTCACACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGGCAGAAGGCCCTTGAGGGTCACTGGTGAATCCAGGTCACACAT  400

seq1  GACATTGGGCACTCAAAGGCAGACATAGCCACCATGCCCTTGAAACCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGGGCACTCAAAGGCAGACATAGCCACCATGCCCTTGAAACCAAG  450

seq1  AGAGCACAGGAAGACACAGAGG--GAGAGAGAGAGAGAGAGAGAGAGAGA  498
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  AGAGCACAGGAAGACACAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGAGA  500

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTGAGCAGGGG  548
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACTGAGCCGGGG  550

seq1  CCAGAAAGGA  558
      ||| ||||||
seq2  CCATAAAGGA  560


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