BAC Information

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BAC

Clone NameB6Ng01-262F08
Chromosome1 (Build37)
Map Location 50,414,062 - 50,415,212
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627430, LOC100041981, EG666962, EG666970
Downstream geneLOC100041993, Tmeff2, Sdpr, LOC383504
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262F08.bB6Ng01-262F08.g
ACCGA066779GA066780
length1,1631,168
definitionB6Ng01-262F08.b B6Ng01-262F08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgttcttaaagcaagaagcaacagaaaaatgtaagatctttcc
ttgacaattacaagtttttctcaaaggttttctactgagactcttctcca
ttttctcaaacctgaggctttttaatctaccactgcctgtttcagtagtg
ctactattgtgatgactatgaccaaagaaacatgggagggaaaagtttta
tttggtttacatttccacatggtagtttgtccccaaaggaaatcaggaca
gaaactcaagcagactagatcttgaagtcaggagctgatgcagagaccat
ggaggagaggctatgctgtttactggattgcttctcctagaacccaaggc
tacaagcccagggagacattagccataaaggattccttgacttaaccaat
gacaaattaaggcatgccctacaaacttacctacatgatctttgtatctt
ataactgcactctttttttctactcaattactaattatgtcactcattac
tagattcatgtaatgcttgtttattcctgctgagttatattacttggaag
atattaaggtttctacatcttgtagtacacatgattttgtgatatatata
tatatatatcaaggcactgtgacatatatcacccttgatcacctctacca
catttaaaaatattttattaatatgtgcattgtaaataatgatatatttt
aatttcttattagttattttatttatttacattttaaatgttatccccct
tcctggtttccccccacaaactccctatcccacacccctgcttctatggt
ggtgctcttctaccaacccacccactcccacctcactgccctagcattcc
cctatattttatatgtgcattttcatttagtgtatttttacttttaatca
tagttaacctttatgcttatctgttactgctcacagcactgtttgtcctc
tttattaccatggatattccccttttgctttagcatttatgcacatatac
attattttaagaatcttttccatacatattgagattttattcccctcctc
agtctgcattatttttgctaaatatgactattcttctatttggaatcaac
ctttatatggaaacatcccatatcgctccttctctttttatgcaaatata
atactaattcatt
gaattctcacctgaggaataccgaatggctgagaagcaccttaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacattagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggagaggatgtggagaaagaggaacactcctccatggttggtg
ggattgcaagcttgtacaaccactctagaaatcagtctgggggtttctca
gaaaatttgacatagtactaccggaagatcccacaatacctctcctgggc
atatatccagaagtttttccaaccggtaaggaggacatatgcttcactgt
gttcatagcagccttatttataaaacccagaagctggaaagaacccagat
gcccctcaacagatgaatggatacagaaaatgtggtacatttacacaatg
gagtactattcagctattaaaaagaatgaatttatgaaatttctaggcaa
atggatggacctggagtgcatcagcctgagtgaggtagcccaataacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttggaaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgccccttcctagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggttctgagagg
aaagaatggaccatctagagactgccatacccggatgatctatcccataa
tcagcctccatatgctaacaccattgcacacactagcaaaattttgctaa
aagaaccctgatatagcttcctcttgtgagactaggccagggccctagca
aacacagaagtggatgctcacagtcagctattggatggatcacaggcccc
caatcgaggagctagagaaagtaccccagagctaagggtctgcaacccta
tagtgacacatatgactaccagtaccccccgagctcatgtctctagctgc
gtatgtatcaaaagatgcctagtcgtcatcagtgaaagagagcaatgatc
gtgcaacttttatgcctcagtcagaccgaccaggcagaaggttgatggtt
ggtatagatgcaaaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_50414062_50415212
seq2: B6Ng01-262F08.b_41_1203 (reverse)

seq1  AATGAATTAGTATTATATTTGGCCATAA----AGAA-GAGCGATATTGGA  45
      |||||||||||||||||||||  |||||    |||| ||||||||| |||
seq2  AATGAATTAGTATTATATTTG--CATAAAAAGAGAAGGAGCGATATGGGA  48

seq1  TTGTTTCATATAAA-GTTGATT-CAAATAGA--GATAGTCATATTTAGC-  90
      |  || |||||||| ||||||| ||||||||   ||||||||||||||| 
seq2  TGTTTCCATATAAAGGTTGATTCCAAATAGAAGAATAGTCATATTTAGCA  98

seq1  AAAATAATGCAGACTGAG--AGGGAATAAAATCTC-ATATGTAT-GAATA  136
      ||||||||||||||||||   |||||||||||||| |||||||| ||| |
seq2  AAAATAATGCAGACTGAGGAGGGGAATAAAATCTCAATATGTATGGAAAA  148

seq1  GATTCTTAAAATAATGTATATGTGCATAAATGCTAAAGCAAAAGGGGAAT  186
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTAAAATAATGTATATGTGCATAAATGCTAAAGCAAAAGGGGAAT  198

seq1  ATCCATGGTAATAAAGAGGACAAACAGTGCTGTGAGCAGTAACAGATAAG  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGGTAATAAAGAGGACAAACAGTGCTGTGAGCAGTAACAGATAAG  248

seq1  CATAAAGGTTAACTATGATTAAAAGTAAAAATACACTAAATGAAAATGCA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGGTTAACTATGATTAAAAGTAAAAATACACTAAATGAAAATGCA  298

seq1  CATATAAAATATAGGGGAATGCTAGGGCAGTGAGGTGGGAGTGGGTGGGT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAAATATAGGGGAATGCTAGGGCAGTGAGGTGGGAGTGGGTGGGT  348

seq1  TGGTAGAAGAGCACCACCATAGAAGCAGGGGTGTGGGATAGGGAGTTTGT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAAGAGCACCACCATAGAAGCAGGGGTGTGGGATAGGGAGTTTGT  398

seq1  GGGGGGAAACCAGGAAGGGGGATAACATTTAAAATGTAAATAAATAAAAT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAAACCAGGAAGGGGGATAACATTTAAAATGTAAATAAATAAAAT  448

seq1  AACTAATAAGAAATTAAAATATATCATTATTTACAATGCACATATTAATA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATAAGAAATTAAAATATATCATTATTTACAATGCACATATTAATA  498

seq1  AAATATTTTTAAATGTGGTAGAGGTGATCAAGGGTGATATATGTCACAGT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTTAAATGTGGTAGAGGTGATCAAGGGTGATATATGTCACAGT  548

seq1  GCCTTGATATATATATATATATATCACAAAATCATGTGTACTACAAGATG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGATATATATATATATATATCACAAAATCATGTGTACTACAAGATG  598

seq1  TAGAAACCTTAATATCTTCCAAGTAATATAACTCAGCAGGAATAAACAAG  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACCTTAATATCTTCCAAGTAATATAACTCAGCAGGAATAAACAAG  648

seq1  CATTACATGAATCTAGTAATGAGTGACATAATTAGTAATTGAGTAGAAAA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACATGAATCTAGTAATGAGTGACATAATTAGTAATTGAGTAGAAAA  698

seq1  AAAGAGTGCAGTTATAAGATACAAAGATCATGTAGGTAAGTTTGTAGGGC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGCAGTTATAAGATACAAAGATCATGTAGGTAAGTTTGTAGGGC  748

seq1  ATGCCTTAATTTGTCATTGGTTAAGTCAAGGAATCCTTTATGGCTAATGT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTAATTTGTCATTGGTTAAGTCAAGGAATCCTTTATGGCTAATGT  798

seq1  CTCCCTGGGCTTGTAGCCTTGGGTTCTAGGAGAAGCAATCCAGTAAACAG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGGGCTTGTAGCCTTGGGTTCTAGGAGAAGCAATCCAGTAAACAG  848

seq1  CATAGCCTCTCCTCCATGGTCTCTGCATCAGCTCCTGACTTCAAGATCTA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCTCTCCTCCATGGTCTCTGCATCAGCTCCTGACTTCAAGATCTA  898

seq1  GTCTGCTTGAGTTTCTGTCCTGATTTCCTTTGGGGACAAACTACCATGTG  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCTTGAGTTTCTGTCCTGATTTCCTTTGGGGACAAACTACCATGTG  948

seq1  GAAATGTAAACCAAATAAAACTTTTCCCTCCCATGTTTCTTTGGTCATAG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAAACCAAATAAAACTTTTCCCTCCCATGTTTCTTTGGTCATAG  998

seq1  TCATCACAATAGTAGCACTACTGAAACAGGCAGTGGTAGATTAAAAAGCC  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACAATAGTAGCACTACTGAAACAGGCAGTGGTAGATTAAAAAGCC  1048

seq1  TCAGGTTTGAGAAAATGGAGAAGAGTCTCAGTAGAAAACCTTTGAGAAAA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTGAGAAAATGGAGAAGAGTCTCAGTAGAAAACCTTTGAGAAAA  1098

seq1  ACTTGTAATTGTCAAGGAAAGATCTTACATTTTTCTGTTGCTTCTTGCTT  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAATTGTCAAGGAAAGATCTTACATTTTTCTGTTGCTTCTTGCTT  1148

seq1  TAAGAACAAGAATTC  1151
      |||||||||||||||
seq2  TAAGAACAAGAATTC  1163