BAC Information

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BAC

Clone NameB6Ng01-263E09
Chromosome1 (Build37)
Map Location 110,145,805 - 110,147,037
singlet/doubletsinglet
Overlap genenone
Upstream geneSerpinb3c, LOC666414, Serpinb11, Serpinb7, Serpinb2, Serpinb10, Serpinb8
Downstream geneLOC435640, EG626474
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263E09.bB6Ng01-263E09.g
ACCGA067484GA067485
length1,2111,209
definitionB6Ng01-263E09.b B6Ng01-263E09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaattaataaacttgaagtattagaaattataggagtgtgaaa
gaaatatgctttgtagaatatatccttttgtagcacaaaaggggagaaaa
tagtattaaataattatttgattaagaggtaaatagtaaatatttgtcaa
tcttttacaacaccaaattacatgtagtgatgaggtaaattttactctag
ttcaacactgagtgcaatttcctccatatgttataccaacatttatatta
acagctttgagtataaaagtgacctttctcaaattgccacaaatgacttc
tacagcaaatgttatcattttaatggtgaccttaaatatttacctaattg
ccagaaatgactctgaaatcatctcctctcatatttcaatgtaggagaat
cactagattatgaacaaccccctccaaaaatataactcaaaaggagaaac
atccagtaattaaaaggaatagatgctagttgtattttctgattgactgt
aggagatgtgtctttgttaaaaaaaaaaaaaaactcaaaataatgaatca
cagaagacaagatcagtgaaaacacctgagtgtaacatttcttgcatttc
tcaacaaacaaggaccaaactcatgagtgcttagtaccaataaacatgtt
ttccactcagaccttgtttccaagcatcattctcagataaaaggacatat
gggttcttggtgaaagacattatggtaggatttggattaaaaaaaacaca
gaagagtaacacaatacatatttcagttttcaaaactaagaaatttctag
aaagaaaacaaaaaataaacatacaaagtgactgtgatatgtcaaaggta
tataggagctgagtggagaagctgtaaccatattatcaaaaataataaga
tagcatatgattaaattatagagcaaatgtgcatatgcagtgagtatgcc
ccacaccaatttgttttcagtcatggtattcccatacatttgttaggaac
acagtgcaagtgacatatcggcactacatttgaatgaatgagaatttatg
agaagaatgagttgtctttattgaaacacagaacttttcttaagcacata
aagaaacatcgaattctgaatattccaatattgctgagttacatttatga
ggtaagcaaaagcccttacaatgctgctcgagtaggatatgtatgaagga
ctccactcgct
gaattctcacctgaggaataccgaatggcagagaagcacctcaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacccagagat
tccacctcacaacagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
agattgcaggcttttacaaccactctggaaatcagtctggtggttcctca
gaaaatcggacatagtactactggaggatccagcagtacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacataatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcaaacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caatacacccatggaaggagttacagagacaaagttttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaacgctgacaccattgcatacactagcaagatttttatcga
aagcacccagatgttagctgttctcttgtgagactattccgggccctagc
aaacacagaaggtggatgcgcacagtcagctaatgatggatcacagggct
cccaatggaggagctagagaaagtaccaagagctaaagggatctgcatcc
ctatagtggatcacatatgaactacagttacccggagcttctgactctag
ctgcatattgtatcaaagatggcctagtccagcatcactggaaagagagg
ccattggacaccgcaactgttaatgcccagtacagggaatgcagggccca
taatggagaataggcagtacgcaaggattgtactgggctagcgaatgtgg
ggcgcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110145805_110147037
seq2: B6Ng01-263E09.b_47_1257

seq1  GAATTCCAAATTAATAAACTTGAAGTATTAGAAATTATAGGAGTGTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATTAATAAACTTGAAGTATTAGAAATTATAGGAGTGTGAAA  50

seq1  GAAATATGCTTTGTAGAATATATCCTTTTGTAGCACAAAAGGGGAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGCTTTGTAGAATATATCCTTTTGTAGCACAAAAGGGGAGAAAA  100

seq1  TAGTATTAAATAATTATTTGATTAAGAGGTAAATAGTAAATATTTGTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTAAATAATTATTTGATTAAGAGGTAAATAGTAAATATTTGTCAA  150

seq1  TCTTTTACAACACCAAATTACATGTAGTGATGAGGTAAATTTTACTCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTACAACACCAAATTACATGTAGTGATGAGGTAAATTTTACTCTAG  200

seq1  TTCAACACTGAGTGCAATTTCCTCCATATGTTATACCAACATTTATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACACTGAGTGCAATTTCCTCCATATGTTATACCAACATTTATATTA  250

seq1  ACAGCTTTGAGTATAAAAGTGACCTTTCTCAAATTGCCACAAATGACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTGAGTATAAAAGTGACCTTTCTCAAATTGCCACAAATGACTTC  300

seq1  TACAGCAAATGTTATCATTTTAATGGTGACCTTAAATATTTACCTAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAATGTTATCATTTTAATGGTGACCTTAAATATTTACCTAATTG  350

seq1  CCAGAAATGACTCTGAAATCATCTCCTCTCATATTTCAATGTAGGAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGACTCTGAAATCATCTCCTCTCATATTTCAATGTAGGAGAAT  400

seq1  CACTAGATTATGAACAACCCCCTCCAAAAATATAACTCAAAAGGAGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGATTATGAACAACCCCCTCCAAAAATATAACTCAAAAGGAGAAAC  450

seq1  ATCCAGTAATTAAAAGGAATAGATGCTAGTTGTATTTTCTGATTGACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTAATTAAAAGGAATAGATGCTAGTTGTATTTTCTGATTGACTGT  500

seq1  AGGAGATGTGTCTTTGTTAAAAAAAAAAAAAAACTCAAAATAATGAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGTGTCTTTGTTAAAAAAAAAAAAAAACTCAAAATAATGAATCA  550

seq1  CAGAAGACAAGATCAGTGAAAACACCTGAGTGTAACATTTCTTGCATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGACAAGATCAGTGAAAACACCTGAGTGTAACATTTCTTGCATTTC  600

seq1  TCAACAAACAAGGACCAAACTCATGAGTGCTTAGTACCAATAAACATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAAACAAGGACCAAACTCATGAGTGCTTAGTACCAATAAACATGTT  650

seq1  TTCCACTCAGACCTTGTTTCCAAGCATCATTCTCAGATAAAAGGACATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTCAGACCTTGTTTCCAAGCATCATTCTCAGATAAAAGGACATAT  700

seq1  GGGTTCTTGGTGAAAGACATTATGGTAGGATTTGGATTAAAAAAAACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTTGGTGAAAGACATTATGGTAGGATTTGGATTAAAAAAAACACA  750

seq1  GAAGAGTAACACAATACATATTTCAGTTTTCAAAACTAAGAAATTTCTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTAACACAATACATATTTCAGTTTTCAAAACTAAGAAATTTCTAG  800

seq1  AAAGAAAACAAAAAATAAACATACAAAGTGACTGTGATATGTCAAAGGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACAAAAAATAAACATACAAAGTGACTGTGATATGTCAAAGGTA  850

seq1  TATAGGAGCTGAGTGGAGAAGCTGTAACCATATTATCAAAAATAATAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAGCTGAGTGGAGAAGCTGTAACCATATTATCAAAAATAATAAGA  900

seq1  TAGCATATGATTAAATTATAGAGCAAATGTGCATATGCAGTGAGTATGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATGATTAAATTATAGAGCAAATGTGCATATGCAGTGAGTATGCC  950

seq1  CCACACCAATTTGTTTTCAGTCATGGTATTCCCATACATTTGTTAGGAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCAATTTGTTTTCAGTCATGGTATTCCCATACATTTGTTAGGAAC  1000

seq1  AACAGTGCAGGTGACATATCGGCACTACATTTGAATGAATGAGAAATTTA  1050
       |||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  -ACAGTGCAAGTGACATATCGGCACTACATTTGAATGAATGAG-AATTTA  1048

seq1  ATTGAGAGAAATGAGTTGTCTTTAATTGAAAACACAGAACTTTTCTTTAA  1100
        |||||  |||||||||||||| |||| |||||||||||||||| ||||
seq2  --TGAGAAGAATGAGTTGTCTTT-ATTG-AAACACAGAACTTTTC-TTAA  1093

seq1  GCAACATAAAAGAAAACAATCAGATATTCTGAATATTCCCAAAATA-TGC  1149
      || |||| |||||||   ||| || ||||||||||||||   |||| |||
seq2  GC-ACAT-AAAGAAA--CATC-GA-ATTCTGAATATTCC---AATATTGC  1134

seq1  TGAG-TACATTTATGAGGGTAGCAAAAGAGCCTCTTACATATGCTGCTCA  1198
      |||| |||||||||||||  ||||||||   | |||||| ||||||||| 
seq2  TGAGTTACATTTATGAGGTAAGCAAAAG---CCCTTACA-ATGCTGCTC-  1179

seq1  GAGTAAAGTATTATGTATGAAAGACTCAACTCGCT  1233
      ||||  || | |||||||||| ||||| |||||||
seq2  GAGT--AGGA-TATGTATGAAGGACTCCACTCGCT  1211