BAC Information

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BAC

Clone NameB6Ng01-263P06
Chromosome1 (Build37)
Map Location 159,949,750 - 160,108,433
singlet/doubletdoublet
Overlap genenone
Upstream gene1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
Downstream gene6430517E21Rik, Astn1, Pappa2, 4930562F17Rik, EG240853
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263P06.bB6Ng01-263P06.g
ACCGA067986GA067987
length8621,159
definitionB6Ng01-263P06.b B6Ng01-263P06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(160,107,575 - 160,108,433)(159,949,750 - 159,950,898)
sequence
gaattcataagagggagaattccttttcaataacatgcagagtcaaaggt
agagggatagaatgacggaggcaggagtcccacccaagaggaaggaggtt
ctgaaaaggaggtgtagcctgagggttgaaccttaaagagtgaagtctgg
gttttatgagcaatggccttgtcgtggaagaaagattcaaaagtcctggg
tatctgtgagaaacagcagatgagtctgtggtaagggggctaaatgcatc
taacacgtcagactgaacacgaaagagcagatggttaagaggactccagt
atacttgaacactgggaaccttgtttgtcactatcaggtgttcttaggtc
ttagtggaggatggtggatggctcgaagttggcatgctggaattttagtg
tacggtggtaagaggggtcgagagtctgtctataaagccttttcagtaac
aatgaagtgaaagacaaaaggtagttagtggagagacaatcaatgagatg
ggataagtgttttaaaaacaaaacaaaacaaaacgaagtgaaaaaaaaaa
acaggcatgactttacagttttaaatctaaagggctcaagaacactcttt
cagtggcaaccttaataaagaacagaggaaatggccagtttcttggagga
aggtatatgttagtttggtagatttctatttatttattcttttgtttgtt
tgtttgtttgtttgtttattaggtatttatttcatttacatttccaatgc
tatcccaaagtcacccacaggctcccccaccaactcccccatccaccctc
tccaacttcttgggcctggtgttccccctgtactgaatgcagataaagtt
tgcaagaaccaa
gaattccacatttacgcagagggagttaaactgtcaggggattttggaat
ctgtttcctagaaacttaggatgaagtaagttggccagtttgctcaaggc
gcaggctagcatggcaaagataagtttgagcctgggatgttttatcttcc
agggctttgctgcttgtaccacagcacattttttttctttttttcctttc
tttcttttctttttttttttttgcctttgaataattaatttttgaaaact
ttgaagaatattgccattatatcattgagtggtgcttttaagtttctatt
ttttgctgttcttaaaaagacagcctaaaaagttccacactgctgagaca
gttaaggtgagctttaaaaagggggatgaaatctcagaaattctcccagt
ccctgggagcttggagttcagtaacttgacataattaggtgttcacttaa
cactcagtaattaaatggcttttcaccaattttgttaagagagagaaaag
ctagtgtgagaggtgcagtagacaccccaggcgctttcacaggacctgtt
ggcagagctgctccggtggctcctgctgaggtactaactatcttctctca
cctgcacagagagtgccaatcatgccagctcccttctccttgtcctgggt
gaaagagctgagaaatggtctcagcgagtctgagaatgaagtgctgagcc
tctgctgggtctgtgatgaagttgcttccctggcagtacctagcatggga
gaaagccaagagctccatggaatagaattaataatttttactattatttt
tagttgggaaggagatttctaggtctgtcattctaaaggtgggtaggtgg
cattagtaatgccttgttacatgccttcagaccatattcccttgccttaa
agtcaaggtcaaggagaagttttgggtcttgggatcactactgttagaga
ataccaaatgagggctgtaagtgatataggccccacacaatccacaggct
taggaagagtgagaatgttcatcctaattccatggaaggacaatgttgaa
gtgcttaggaaattcaagctagttgttctctcacctccccgcccataacc
gacctagcacatgactaaccaacagaacatcaggagcttgattggttcac
tgtaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_160107575_160108433
seq2: B6Ng01-263P06.b_50_911 (reverse)

seq1  TTGG-TCTTGCAAACTTTATCTGC-CTCAGTACA-GGGGAACACCAGGGC  47
      |||| |||||||||||||||||||  |||||||| ||||||||||||| |
seq2  TTGGTTCTTGCAAACTTTATCTGCATTCAGTACAGGGGGAACACCAGGCC  50

seq1  CAAGAAGTGGGAGTGGGTGGGTGGGGGAGTGGGTGGGGGAGCCTGTGGGT  97
      |||||||| |||| |||||| ||||||||| |||||||||||||||||||
seq2  CAAGAAGTTGGAGAGGGTGGATGGGGGAGTTGGTGGGGGAGCCTGTGGGT  100

seq1  GACTTTGGGATAGCATTGGAAATGTAAATGAAATAAATACCTAATAAACA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGGGATAGCATTGGAAATGTAAATGAAATAAATACCTAATAAACA  150

seq1  AACAAACAAACAAACAAACAAAAGAATAAATAAATAGAAATCTACCAAAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAACAAAAGAATAAATAAATAGAAATCTACCAAAC  200

seq1  TAACATATACCTTCCTCCAAGAAACTGGCCATTTCCTCTGTTCTTTATTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATATACCTTCCTCCAAGAAACTGGCCATTTCCTCTGTTCTTTATTA  250

seq1  AGGTTGCCACTGAAAGAGTGTTCTTGAGCCCTTTAGATTTAAAACTGTAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGCCACTGAAAGAGTGTTCTTGAGCCCTTTAGATTTAAAACTGTAA  300

seq1  AGTCATGCCTGTTTTTTTTTTTCACTTCGTTTTGTTTTGTTTTGTTTTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGCCTGTTTTTTTTTTTCACTTCGTTTTGTTTTGTTTTGTTTTTA  350

seq1  AAACACTTATCCCATCTCATTGATTGTCTCTCCACTAACTACCTTTTGTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTATCCCATCTCATTGATTGTCTCTCCACTAACTACCTTTTGTC  400

seq1  TTTCACTTCATTGTTACTGAAAAGGCTTTATAGACAGACTCTCGACCCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTCATTGTTACTGAAAAGGCTTTATAGACAGACTCTCGACCCCT  450

seq1  CTTACCACCGTACACTAAAATTCCAGCATGCCAACTTCGAGCCATCCACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCACCGTACACTAAAATTCCAGCATGCCAACTTCGAGCCATCCACC  500

seq1  ATCCTCCACTAAGACCTAAGAACACCTGATAGTGACAAACAAGGTTCCCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCACTAAGACCTAAGAACACCTGATAGTGACAAACAAGGTTCCCA  550

seq1  GTGTTCAAGTATACTGGAGTCCTCTTAACCATCTGCTCTTTCGTGTTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAAGTATACTGGAGTCCTCTTAACCATCTGCTCTTTCGTGTTCAG  600

seq1  TCTGACGTGTTAGATGCATTTAGCCCCCTTACCACAGACTCATCTGCTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACGTGTTAGATGCATTTAGCCCCCTTACCACAGACTCATCTGCTGT  650

seq1  TTCTCACAGATACCCAGGACTTTTGAATCTTTCTTCCACGACAAGGCCAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAGATACCCAGGACTTTTGAATCTTTCTTCCACGACAAGGCCAT  700

seq1  TGCTCATAAAACCCAGACTTCACTCTTTAAGGTTCAACCCTCAGGCTACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATAAAACCCAGACTTCACTCTTTAAGGTTCAACCCTCAGGCTACA  750

seq1  CCTCCTTTTCAGAACCTCCTTCCTCTTGGGTGGGACTCCTGCCTCCGTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTTCAGAACCTCCTTCCTCTTGGGTGGGACTCCTGCCTCCGTCA  800

seq1  TTCTATCCCTCTACCTTTGACTCTGCATGTTATTGAAAAGGAATTCTCCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCCTCTACCTTTGACTCTGCATGTTATTGAAAAGGAATTCTCCC  850

seq1  TCTTATGAATTC  859
      ||||||||||||
seq2  TCTTATGAATTC  862

seq1: chr1_159949750_159950898
seq2: B6Ng01-263P06.g_66_1224

seq1  GAATTCCACATTTACGCAGAGGGAGTTAAACTGTCAGGGGATTTTGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATTTACGCAGAGGGAGTTAAACTGTCAGGGGATTTTGGAAT  50

seq1  CTGTTTCCTAGAAACTTAGGATGAAGTAAGTTGGCCAGTTTGCTCAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCTAGAAACTTAGGATGAAGTAAGTTGGCCAGTTTGCTCAAGGC  100

seq1  GCAGGCTAGCATGGCAAAGATAAGTTTGAGCCTGGGATGTTTTATCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTAGCATGGCAAAGATAAGTTTGAGCCTGGGATGTTTTATCTTCC  150

seq1  AGGGCTTTGCTGCTTGTACCACAGCACATTTTTTTTCTTTTTTTCCTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTTGCTGCTTGTACCACAGCACATTTTTTTTCTTTTTTTCCTTTC  200

seq1  TTTCTTTTCTTTTTTTTTTTTTGCCTTTGAATAATTAATTTTTGAAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTTTTTTTTTTTTTGCCTTTGAATAATTAATTTTTGAAAACT  250

seq1  TTGAAGAATATTGCCATTATATCATTGAGTGGTGCTTTTAAGTTTCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAATATTGCCATTATATCATTGAGTGGTGCTTTTAAGTTTCTATT  300

seq1  TTTTGCTGTTCTTAAAAAGACAGCCTAAAAAGTTCCACACTGCTGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGTTCTTAAAAAGACAGCCTAAAAAGTTCCACACTGCTGAGACA  350

seq1  GTTAAGGTGAGCTTTAAAAAGGGGGATGAAATCTCAGAAATTCTCCCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGTGAGCTTTAAAAAGGGGGATGAAATCTCAGAAATTCTCCCAGT  400

seq1  CCCTGGGAGCTTGGAGTTCAGTAACTTGACATAATTAGGTGTTCACTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGAGCTTGGAGTTCAGTAACTTGACATAATTAGGTGTTCACTTAA  450

seq1  CACTCAGTAATTAAATGGCTTTTCACCAATTTTGTTAAGAGAGAGAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGTAATTAAATGGCTTTTCACCAATTTTGTTAAGAGAGAGAAAAG  500

seq1  CTAGTGTGAGAGGTGCAGTAGACACCCCAGGCGCTTTCACAGGACCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGTGAGAGGTGCAGTAGACACCCCAGGCGCTTTCACAGGACCTGTT  550

seq1  GGCAGAGCTGCTCCGGTGGCTCCTGCTGAGGTACTAACTATCTTCTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGCTGCTCCGGTGGCTCCTGCTGAGGTACTAACTATCTTCTCTCA  600

seq1  CCTGCACAGAGAGTGCCAATCATGCCAGCTCCCTTCTCCTTGTCCTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACAGAGAGTGCCAATCATGCCAGCTCCCTTCTCCTTGTCCTGGGT  650

seq1  GAAAGAGCTGAGAAATGGTCTCAGCGAGTCTGAGAATGAAGTGCTGAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCTGAGAAATGGTCTCAGCGAGTCTGAGAATGAAGTGCTGAGCC  700

seq1  TCTGCTGGGTCTGTGATGAAGTTGCTTCCCTGGCAGTACCTAGCATGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGGTCTGTGATGAAGTTGCTTCCCTGGCAGTACCTAGCATGGGA  750

seq1  GAAAGCCAAGAGCTCCATGGAATAGAATTAATAA-TTTTACTATTATTTT  799
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAAAGCCAAGAGCTCCATGGAATAGAATTAATAATTTTTACTATTATTTT  800

seq1  TAGTTGGGAAGGAGATTTCTAGGTCTGTCATTCT-AAGGTGGGTAGGTGG  848
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAGTTGGGAAGGAGATTTCTAGGTCTGTCATTCTAAAGGTGGGTAGGTGG  850

seq1  CATTAGTAATGCCTTG-TACATGCCTTCAGACCATATTCCC-TGCCTTAA  896
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  CATTAGTAATGCCTTGTTACATGCCTTCAGACCATATTCCCTTGCCTTAA  900

seq1  AGTCAAGGGTCAGGAGAAGTTTT-GGTCTTGGGATCACTACTGTAAGAGA  945
      ||||||||   |||||||||||| |||||||||||||||||||| |||||
seq2  AGTCAAGGTCAAGGAGAAGTTTTGGGTCTTGGGATCACTACTGTTAGAGA  950

seq1  ATACCAAATGAGGGCTGTAAGTGATATA-GCCCCACACAAT-CACAGGC-  992
      |||||||||||||||||||||||||||| |||||||||||| ||||||| 
seq2  ATACCAAATGAGGGCTGTAAGTGATATAGGCCCCACACAATCCACAGGCT  1000

seq1  TAGGAAGAGTGAG-ATGTTCATCCTAAATTTCATG--AGGACAAATGTGA  1039
      ||||||||||||| ||||||||||| |||| ||||  |||||||   |||
seq2  TAGGAAGAGTGAGAATGTTCATCCT-AATTCCATGGAAGGACAATGTTGA  1049

seq1  A-TGC-TAGGAAATTCAAGCTAGTTGT--TCTCACCTCCCCGCCCA-AAC  1084
      | ||| |||||||||||||||||||||  ||||||||||||||||| |||
seq2  AGTGCTTAGGAAATTCAAGCTAGTTGTTCTCTCACCTCCCCGCCCATAAC  1099

seq1  CAACCCAGCAACCAGACAACCAAACAGACCATAAAGAAGATTTTGAATTT  1134
      | ||| ||| ||  ||| | | |||||| |||    | ||  ||||  ||
seq2  CGACCTAGC-ACATGACTAACCAACAGAACAT---CAGGAGCTTGA--TT  1143

seq1  GGTT-ACTGTAAATTG  1149
      |||| |||||||||||
seq2  GGTTCACTGTAAATTG  1159