BAC Information

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BAC

Clone NameB6Ng01-264D08
Chromosome1 (Build37)
Map Location 45,001,821 - 45,002,459
singlet/doubletsinglet
Overlap genenone
Upstream geneTpp2, A530098C11Rik, EG666713, 1700029F09Rik, Kdelc1, Bivm, Ercc5, 4832428D23Rik, LOC435619, Txn-ps1, Gulp1, LOC100041738, LOC100041752
Downstream geneLOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264D08.bB6Ng01-264D08.g
ACCGA068170GA068171
length400946
definitionB6Ng01-264D08.b B6Ng01-264D08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaatctggctttacaatttatataatttaagctgaacaatgttggcctgc
tgaagaatgaatttagttatgtgctacttgaagaaaataataattctgtc
tatccaacaattccttccaaaattgcaacaaaacaacataaaattctcaa
cattagagaactattttaattttcaaattgtttgttgaatcctattgtga
ttcaggtagaattatctaacatgcaaaaattcatattcacttctgtactt
tgaaatacttctgctttattttttaaatttacataattgttgttgttgtt
ggtggtggtgtgtgtatatgtgtgtgtatgtatgtgtgtttaatatggat
gtgctatggtatatatgtgaaagttacagtacatatttcagatatttact

gaattcagtaagaatgttacctgttcagtaacatttgaattcacttctag
tagagacagtgaaactaattacacattacaatttacttgaagagagctag
aaaagctcagggctagtctccatagtaattacttaggacaatagccaagt
cacatccaaacacaggaatacacaatggtcttagaaataggtgtattgta
gtattatttatgaaagggttagtagaacccctggtgcagtattttcccta
ggctcagaggaatagcataattagttatttttataggacccctggtggtg
ggtttaacaatagacttgcattatatcagagcactcacctggctcctgtg
tttaggtgatcttaattaagggttgttcctattttcagttgtaaacatgg
cctggctcccgtcattttttatgtatgcattttctttgttttgtgtaaga
accagtgtatcttggcaaatgtattcacctagccatcttgattttcattt
gtattataaggcttctgctcaatttgagaaattccatccagatataagac
tcccttgtgttcgtatttgtttatcattcatttctcactaaatacttgct
cacctgtaaccagaaccccgtttcctgcagattggagacccaactgaggc
ttgtcttcagcagcttacatttcaaatgttatcccccattgctggtttcc
cttcctccaaacctctatcctatcctttctccccctgattctatgagggt
gctcctctacccacctacccactccctcctctctactctagcaagggttc
ccctcccaaggattccaggtgaggaaatactctactacatatgcagctgt
agcatggctccctccatgtgtggtttagtcctttccatggtggttcagtt
cttaggatctctgggcggggctggtggtgggttatatggggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_45001821_45002459
seq2: B6Ng01-264D08.b_44_449

seq1  GAATTCAAATCTGGCTTTACAATTTATATAATTTAAGCTGAACAATGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCTGGCTTTACAATTTATATAATTTAAGCTGAACAATGTTG  50

seq1  GCCTGCTGAAGAATGAATTTAGTTATGTGCTACTTGAAGAAAATAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTGAAGAATGAATTTAGTTATGTGCTACTTGAAGAAAATAATAAT  100

seq1  TCTGTCTATCCAACAATTCCTTCCAAAATTGCAACAAAACAACATAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTATCCAACAATTCCTTCCAAAATTGCAACAAAACAACATAAAAT  150

seq1  TCTCAACATTAGAGAACTATTTTAATTTTCAAATTGTTTGTTGAATCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAACATTAGAGAACTATTTTAATTTTCAAATTGTTTGTTGAATCCTA  200

seq1  TTGTGATTCAGGTAGAATTATCTAACATGCAAAAATTCATATTCACTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTCAGGTAGAATTATCTAACATGCAAAAATTCATATTCACTTCT  250

seq1  GTACTTTGAAATACTTCTGCTTTATTTTTTAAATTTACATAATTGTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGAAATACTTCTGCTTTATTTTTTAAATTTACATAATTGTTGTT  300

seq1  GTTGTTGGTGGTGGTGTGTGTATATGTGTGTGTATGTATGTGTGTTCAAT  350
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTTGTTGGTGGTGGTGTGTGTATATGTGTGTGTATGTATGTGTGTTTAAT  350

seq1  ATGGATGTGCTATGGCATAAATGTGAAAGTTACAGTACATATTTCAGATA  400
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  ATGGATGTGCTATGGTATATATGTGAAAGTTACAGTACATATTTCAGATA  400

seq1  TATACTCCTTCATTATAATACGTGGGTTCTGGGAATCAAAACCAGGTGGT  450
      | ||||                                            
seq2  TTTACT--------------------------------------------  406

seq1  CAGACTTGGTAGCAATAAGCTTTACATACGGAGTTAACATTCTGACTCTA  500
                                                        
seq2  --------------------------------------------------  406

seq1  CTTTTGAGATCTAAATGATTATTTATTTTCTCATCACAGCTATGATAACT  550
                                                        
seq2  --------------------------------------------------  406

seq1  TGTGATATGCTTGTTTTATTTGTGTTATAAAATCATACCTATGCCTGGAG  600
                                                        
seq2  --------------------------------------------------  406

seq1  GACCTCAATCTGACACTTATTAGATCTGTACTATTTACT  639
                                             
seq2  ---------------------------------------  406