BAC Information

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BAC

Clone NameB6Ng01-264J10
Chromosome1 (Build37)
Map Location 191,555,354 - 191,698,828
singlet/doubletdoublet
Overlap genePtpn14, LOC100042438
Upstream geneUsh2a, Kctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf
Downstream geneSmyd2, Prox1, LOC100039394, EG666975, Rps6kc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264J10.bB6Ng01-264J10.g
ACCGA068456GA068457
length1,061361
definitionB6Ng01-264J10.b B6Ng01-264J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(191,697,773 - 191,698,828)(191,555,354 - 191,555,720)
sequence
gaattcctctgtggacattttagagaggtttaaggccatggtcctttgcc
agatttgacttttataggagctttgtggacaggtagggtaaaattaaaaa
tgaacttcagagagctggtctggaaagcaagtgagcaaggaaggaaagct
ggaggcactctgggtggacaaagtgacctcgaatgcagacagtgacgaca
cacggggcaccacctcatccccgcacaaggatgctcatggccgctgcaca
gcccggcgtttgtataaacatgacttgcacaggcactcacaggcaagaga
gtctgcgagtgctgagcatgggagtagcacgaatgggcagaactctctgc
tcacaagcatgcagtatcaggcgaggagtccccagagcaaagatcacacg
tcacaacccgatacagggggcaggcaaggagcccaggagaagtagccctc
aaggctggagcacagtcttcctggggcgttgcgtcacagtttccaattct
gacattgtggcagggttcaaaaaaaattatatgcccaaaaaatttggggt
aagaaatccaggggtgatctaaccactccctactgtccttggacaagctc
tgagcacttttagtgaatgatggtcctgctggcaagagtgtagcccaaga
gtcactttctatgcaacagttaaccatatttaggctggcatttgctccaa
cccctgccagacaaccaaatgccctttaatttatctctaaaatgaggagg
ctgaacccagctccaaacggcaagaaccgatctccaaacagcagcacact
atccatccatgagattgaagggtgccagacccccagtgcccagtcatgaa
caggctaacaggaacacgtcagcgagagcctgagaaaggtgatgttccat
actaaacggcaaaggttacgaaaggactggacacacccggtgaaaacact
cacttccccgaaggttataatggaaatgcaaaagctgaagaacaggagga
tgattgtggaacagctgctggacactgtcccagcttcccctaagaataac
tgaacatctgg
caactcttccacttgagttttcttttacatttatttactttgtgtgtgtg
tgtgtgtgtatgtgtgtgtgtgtgtgggcacacatttgcgtctctctttc
cactttgtgggccccaggaatcgaactcagatggtggagcgcatccttac
cggctgagccatctctccttcacagctctgctacttttgagaagtgttct
gttgggctgactttgtagcttttctgaccgtttgtttcttcatctgtgag
gtggagccaggcatatacggcttgccagagcatctatgagacttcagtgg
gatgccttataatgtactgtcttgtcaggagggtgcttgtgtgttggcgg
cctcttatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_191697773_191698828
seq2: B6Ng01-264J10.b_43_1103 (reverse)

seq1  CCAGATG-TCAGTTATTC-TAGGGG-AGCTGGGACAGTGTCCAGCAGCTT  47
      ||||||| |||||||||| |||||| ||||||||||||||||||||||| 
seq2  CCAGATGTTCAGTTATTCTTAGGGGAAGCTGGGACAGTGTCCAGCAGCTG  50

seq1  GTCCACATTCATCCTCCTGTTC-TCAGCTTTTGCATTTCCATTATAACCT  96
       |||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  TTCCACAATCATCCTCCTGTTCTTCAGCTTTTGCATTTCCATTATAACCT  100

seq1  TCGGGGAAGTGAGTGTTTTCACCGGGTGTGTCCAGTCC-TTCGTAACCTT  145
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TCGGGGAAGTGAGTGTTTTCACCGGGTGTGTCCAGTCCTTTCGTAACCTT  150

seq1  TGCCGTTTAGTATGGAACATCACCTTTCTCAGGCTCTCGCTGACGTGTTC  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGTTTAGTATGGAACATCACCTTTCTCAGGCTCTCGCTGACGTGTTC  200

seq1  CTGTTAGCCTGTTCATGACTGGGCACTGGGGGTCTGGCACCCTTCAATCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGCCTGTTCATGACTGGGCACTGGGGGTCTGGCACCCTTCAATCT  250

seq1  CATGGATGGATAGTGTGCTGCTGTTTGGAGATCGGTTCTTGCCGTTTGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATGGATAGTGTGCTGCTGTTTGGAGATCGGTTCTTGCCGTTTGGA  300

seq1  GCTGGGTTCAGCCTCCTCATTTTAGAGATAAATTAAAGGGCATTTGGTTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTTCAGCCTCCTCATTTTAGAGATAAATTAAAGGGCATTTGGTTG  350

seq1  TCTGGCAGGGGTTGGAGCAAATGCCAGCCTAAATATGGTTAACTGTTGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGGGGTTGGAGCAAATGCCAGCCTAAATATGGTTAACTGTTGCA  400

seq1  TAGAAAGTGACTCTTGGGCTACACTCTTGCCAGCAGGACCATCATTCACT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGTGACTCTTGGGCTACACTCTTGCCAGCAGGACCATCATTCACT  450

seq1  AAAAGTGCTCAGAGCTTGTCCAAGGACAGTAGGGAGTGGTTAGATCACCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCTCAGAGCTTGTCCAAGGACAGTAGGGAGTGGTTAGATCACCC  500

seq1  CTGGATTTCTTACCCCAAATTTTTTGGGCATATAATTTTTTTTGAACCCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTTCTTACCCCAAATTTTTTGGGCATATAATTTTTTTTGAACCCT  550

seq1  GCCACAATGTCAGAATTGGAAACTGTGACGCAACGCCCCAGGAAGACTGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAATGTCAGAATTGGAAACTGTGACGCAACGCCCCAGGAAGACTGT  600

seq1  GCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCTGTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGCCTTGAGGGCTACTTCTCCTGGGCTCCTTGCCTGCCCCCTGTA  650

seq1  TCGGGTTGTGACGTGTGATCTTTGCTCTGGGGACTCCTCGCCTGATACTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTTGTGACGTGTGATCTTTGCTCTGGGGACTCCTCGCCTGATACTG  700

seq1  CATGCTTGTGAGCAGAGAGTTCTGCCCATTCGTGCTACTCCCATGCTCAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTGTGAGCAGAGAGTTCTGCCCATTCGTGCTACTCCCATGCTCAG  750

seq1  CACTCGCAGACTCTCTTGCCTGTGAGTGCCTGTGCAAGTCATGTTTATAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGCAGACTCTCTTGCCTGTGAGTGCCTGTGCAAGTCATGTTTATAC  800

seq1  AAACGCCGGGCTGTGCAGCGGCCATGAGCATCCTTGTGCGGGGATGAGGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGCCGGGCTGTGCAGCGGCCATGAGCATCCTTGTGCGGGGATGAGGT  850

seq1  GGTGCCCCGTGTGTCGTCACTGTCTGCATTCGAGGTCACTTTGTCCACCC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCCCGTGTGTCGTCACTGTCTGCATTCGAGGTCACTTTGTCCACCC  900

seq1  AGAGTGCCTCCAGCTTTCCTTCCTTGCTCACTTGCTTTCCAGACCAGCTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCTCCAGCTTTCCTTCCTTGCTCACTTGCTTTCCAGACCAGCTC  950

seq1  TCTGAAGTTCATTTTTAATTTTACCCTACCTGTCCACAAAGCTCCTATAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTTCATTTTTAATTTTACCCTACCTGTCCACAAAGCTCCTATAA  1000

seq1  AAGTCAAATCTGGCAAAGGACCATGGCCTTAAACCTCTCTAAAATGTCCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAATCTGGCAAAGGACCATGGCCTTAAACCTCTCTAAAATGTCCA  1050

seq1  CAGAGGAATTC  1056
      |||||||||||
seq2  CAGAGGAATTC  1061

seq1: chr1_191555354_191555720
seq2: B6Ng01-264J10.g_68_434

seq1  GAATTCCAACTCTTCCACTTGAGTTTTCTTTTACATTTATTTACTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTCTTCCACTTGAGTTTTCTTTTACATTTATTTACTTTGTG  50

seq1  TGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGGGCACACATTTGCGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGGGCACACATTTGCGTCTC  100

seq1  TCTTTCCACTTTGTGGGCCCCAGGAATCGAACTCAGATGGTGGAGCGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCACTTTGTGGGCCCCAGGAATCGAACTCAGATGGTGGAGCGCAT  150

seq1  CCTTACCGGCTGAGCCATCTCTCCTTCACAGCTCTGCTACTTTTGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACCGGCTGAGCCATCTCTCCTTCACAGCTCTGCTACTTTTGAGAAG  200

seq1  TGTTCTGTTGGGCTGACTTTGTAGCTTTTCTGACCGTTTGTTTCTTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTGGGCTGACTTTGTAGCTTTTCTGACCGTTTGTTTCTTCATC  250

seq1  TGTGAGGTGGAGCCAGGCAGATACGGCTTGCCAGAGCATCTATGAGACTT  300
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTGAGGTGGAGCCAGGCATATACGGCTTGCCAGAGCATCTATGAGACTT  300

seq1  CAGTGGGATGCCGTATAATGTACTGCCTTGTCAGGAGGGTGCTTGTGTGT  350
      |||||||||||| |||||||||||| ||||||||||||||||||||||||
seq2  CAGTGGGATGCCTTATAATGTACTGTCTTGTCAGGAGGGTGCTTGTGTGT  350

seq1  TGGCGGCCTCGTATGTG  367
      |||||||||| ||||||
seq2  TGGCGGCCTCTTATGTG  367