BAC Information

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BAC

Clone NameB6Ng01-264O07
Chromosome1 (Build37)
Map Location 147,556,376 - 147,693,961
singlet/doubletdoublet
Overlap genenone
Upstream geneRgs18, LOC667877, LOC625057, LOC383570
Downstream geneLOC383571, B830045N13Rik, LOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264O07.bB6Ng01-264O07.g
ACCGA068682GA068683
length2111,182
definitionB6Ng01-264O07.b B6Ng01-264O07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,693,745 - 147,693,961)(147,556,376 - 147,557,271)
sequence
atttgtctgagaacattctgtggatctagagtctgaaagagttttttttt
ttcattgtatttccattgaattcttttgaggacttgatcaagaacaatga
ccatgattgaacattcactaatatctactctagattgacaattctattat
agtgattgcatatatatatatatatatatatatatatatatatatgtgtg
tgtgtgtgtgt
gaattccattttgtagacgtgccacgttttctttagctattcttcaattg
agggacatgtaggtctttttttttttttttcagtttctggctattaagaa
taaagctattgtgaacatagtagagtacatgttcaaattgatttccaatg
tagttgtataagtttgtactcccaccagcaatggagaagtgttcgccttg
ctccatatcctctccagaatatgctattttcttcagtttttgtcttagcc
attcagaccaatgtaagatggaatctcaaagttgcgttgatttgcatttc
cctgattactaaggactttgaacatttctttaagtgcttctcggccattt
gagattcatctgttgagaattgtgtttagttctgcactccacttttaatt
aggttatttgggttttggtagttaacttcttgagttctttatgaattttg
gatattagccaactgttagatgtaaggttggtcaaagtccttttggaatt
tgtaagctgctgttttgtcctattgacagtgccctttgccttatagagga
ttttcaatttcatagaaaaagaaagtagcttcaacaacttgtgccagtct
aattggatgcctacatgtagaagaatgtaaatagatccacatttgtcacc
ctacacaaaactgaagtacaagtggatcaagaacctctctataaaccttg
atacactaaatctcatagaagagaaagtgggaaatagccttgaatgcatt
gttacagttgttacaggagacaatttcatgaaccaatgcctcaggctcta
ttttgattttcttaacttagggaaatgtagtatgttcactttctgactcg
tgagatcttttataaacactgatttctttgtattttgtcttttttaaaat
tctttactaatcttagatactcatagatattactgttttctatagcattc
ataattattagtgagtgaaagaaatcccagcacatgatataaactatttt
tctatatgacacagtatgctttattatggattttttttttgtattgtctt
gcagcaaattatttcaatatatctcatgaactcatatttattagtcattt
atggtcttttgtagattcattccgttccagatgattcgtattagcatagt
gaatctcactattcaatttgtggttaacctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147693745_147693961
seq2: B6Ng01-264O07.b_44_260 (reverse)

seq1  ACACACACACACACACATATATATATATATATATATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACATATATATATATATATATATATATATATATATAT  50

seq1  ATGCAATCACTATAATAGAATTGTCAATCTAGAGTAGATATTAGTGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATCACTATAATAGAATTGTCAATCTAGAGTAGATATTAGTGAATG  100

seq1  TTCAATCATGGTCATTGTTCTTGATCAAGTCCTCAAAAGAATTCAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCATGGTCATTGTTCTTGATCAAGTCCTCAAAAGAATTCAATGGA  150

seq1  AATACAATGAAAAAAAAAAACTCTTTCAGACTCTAGATCCACAGAATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATGAAAAAAAAAAACTCTTTCAGACTCTAGATCCACAGAATGTT  200

seq1  CTCAGACAAATGAATTC  217
      |||||||||||||||||
seq2  CTCAGACAAATGAATTC  217

seq1: chr1_147556376_147557271
seq2: B6Ng01-264O07.g_370_1249

seq1  TGATTACTAAGGACTTTGAACATTTCTTTAAGTGCTTCTCGGCCATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACTAAGGACTTTGAACATTTCTTTAAGTGCTTCTCGGCCATTTGA  50

seq1  GATTCATCTGTTGAGAATTGTGTTTAGTTCTGCACTCCACTTTTAATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATCTGTTGAGAATTGTGTTTAGTTCTGCACTCCACTTTTAATTAG  100

seq1  GTTATTTGGGTTTTGGTAGTTAACTTCTTGAGTTCTTTATGAATTTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTGGGTTTTGGTAGTTAACTTCTTGAGTTCTTTATGAATTTTGGA  150

seq1  TATTAGCCAACTGTTAGATGTAAGGTTGGTCAAAGTCCTTTTGGAATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCAACTGTTAGATGTAAGGTTGGTCAAAGTCCTTTTGGAATTTG  200

seq1  TAAGCTGCTGTTTTGTCCTATTGACAGTGCCCTTTGCCTTATAGAGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGCTGTTTTGTCCTATTGACAGTGCCCTTTGCCTTATAGAGGATT  250

seq1  TTCAATTTCATAGAAAAAGAAAGTAGCTTCAACAACTTGTGCCAGTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTCATAGAAAAAGAAAGTAGCTTCAACAACTTGTGCCAGTCTAA  300

seq1  TTGGATGCCTACATGTAGAAGAATGTAAATAGATCCACATTTGTCACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGCCTACATGTAGAAGAATGTAAATAGATCCACATTTGTCACCCT  350

seq1  ACACAAAACTGAAGTACAAGTGGATCAAGAACCTCTCTATAAACCTTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAACTGAAGTACAAGTGGATCAAGAACCTCTCTATAAACCTTGAT  400

seq1  ACACTAAATCTCATAGAAGAGAAAGTGGGAAATAGCCTTGAATGCATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAAATCTCATAGAAGAGAAAGTGGGAAATAGCCTTGAATGCATTGT  450

seq1  TACAGTTGTTACAGGAGACAATTTCATGAACCAATGCCTCAGGCTCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGTTACAGGAGACAATTTCATGAACCAATGCCTCAGGCTCTATT  500

seq1  TTGATTTTCTTAACTTAGGGAAATGTAGTATGTTCACTTTCTGACTCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTCTTAACTTAGGGAAATGTAGTATGTTCACTTTCTGACTCGTG  550

seq1  AGATCTTTTATAAAACACTGATTTCTTTGTATTTTGTCTTTTTAAAAATT  600
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  AGATCTTTTAT-AAACACTGATTTCTTTGTATTTTGTCTTTTTTAAAATT  599

seq1  CTTTACTAATCTTAGATACTCATAGATATTACTGTTTTCTATAGCATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTAATCTTAGATACTCATAGATATTACTGTTTTCTATAGCATTCA  649

seq1  TAATTATTAGTGAGTTGAAAGAAATCCCAGCACATGATATAAACTA-TTT  699
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  TAATTATTAGTGAG-TGAAAGAAATCCCAGCACATGATATAAACTATTTT  698

seq1  TCTATAATGACAACAGTAATGCTTAATTATTGA--TTTTTTTTGTATTGT  747
      ||||| ||||| ||||| |||||| ||||| ||  |||||||||||||| 
seq2  TCTAT-ATGAC-ACAGT-ATGCTTTATTATGGATTTTTTTTTTGTATTG-  744

seq1  TCTTGCCAGCAAATTATTTCAATATATCTCATGACCTCATAATTTATTAG  797
      ||||| |||||||||||||||||||||||||||| ||||| |||||||||
seq2  TCTTG-CAGCAAATTATTTCAATATATCTCATGAACTCAT-ATTTATTAG  792

seq1  TCCAATTTATGTTTCCTTTTGTAGAATTCATTCTGTTCACAGTTTGATTT  847
      ||  ||||||| |  ||||||||| |||||||| |||| |||  ||||| 
seq2  TC--ATTTATGGT--CTTTTGTAG-ATTCATTCCGTTC-CAG-ATGATT-  834

seq1  CTATATTAGCATTTAGTG-ATCTACATATTTCATTTTGTGGTTAACCTAT  896
         ||||||||  ||||| |||| ||   |||| ||||||||||||||||
seq2  -CGTATTAGCA--TAGTGAATCT-CACTATTCAATTTGTGGTTAACCTAT  880