BAC Information

Click to search

BAC

Clone NameB6Ng01-266B13
Chromosome1 (Build37)
Map Location 149,374,718 - 149,375,871
singlet/doubletsinglet
Overlap genenone
Upstream geneB830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266B13.bB6Ng01-266B13.g
ACCGA069579GA069580
length1,1511,175
definitionB6Ng01-266B13.b B6Ng01-266B13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccactgttttttgcatagtgtctgctccagtttgttatctgcc
taaaggtgaatgaaggttgttttttttttgtttgtttgtttgcttgtttt
gttttgttttgttttttctctcatctcctcctggtatacaattgacctga
ttgaataaacagagaaagtggaagggctctagttgcctagttggggaatg
gggatgtagattactacaggaaacagaggggggaggataaaatcacaata
agcatgtctgaaaaatttacaaataatcatactattaactatctatctaa
aaagacaccatagacataagtctgtgtataaagatacatatacagtttaa
gagaaagtttgtcatctttactgtcaatgttcgctcctagagctgaacaa
gaaaaatgcagcagacttcttgatgtgtatgcggtaagagcatgagtctc
caatcctacaaaaagaactacagaaaactaagaaatgctgatagttggag
aaatagtcctcactaggaatgaactcatcagttgattatctaatacctaa
tagccagttttgaagccatatatacaaataacatagagactgagcagttt
gatctatatatatatttatttttgcatccatatatgtgcttgtaacatcg
atgaaaaggttatgactttgagaggaggtatacatactcacttgaatgag
taaataatgaatgaagtaatattttcatgtaaaaatattatagagaagta
agtgaaataagattaaaatacagattattggtagaacacttgcttagcat
gcctgagattgaatgttatccaagagtgaaaaaaaaaaaagggagaaaag
atggtaagaatttccagaatgatataatagaaatgtttcagacagtgcta
ctttaaaatataaaaactagaaaacagaagattcaattcaatctaaaata
aaacaggtagtaataaaatgtattactatagagttaaatgtgaaactttg
gaacataaaataaactttcacacatgtaataaatggaaatattataatag
atttaattgaaatatcattaacactgatacctataaaacacatattataa
taagtagatgcacaccgaattgccagccatcgtttatctagacgagactg
g

gaattctcacctgaggtaataccgattggcagagaagcacctgaaaaaat
gttcaacatccttaatcaccagggaaatgcaaatcaaaacaaccatgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcagacttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactacccaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaacg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcaatcaatatgtactcactgataggtggatattagccccaaacc
taggatacccaagatataagatagaatttgctaaacaaatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgaagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagtagccaggagctaaagggatctgcaccctata
gtggacacattatgactaaccagtaccccggagctctgactctcgctgca
tatgtatcaaaagatggctagttcgcatcactgaaaagaagcccatgact
tgccaaactttatatgccaagtcaaggaacgcagccgaaagggaatggtg
tgctagggtaagtcatctctacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149374718_149375871
seq2: B6Ng01-266B13.b_48_1198

seq1  GAATTCTCCACTGTTTTTTGCATAGTGTCTGCTCCAGTTTGTTATCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACTGTTTTTTGCATAGTGTCTGCTCCAGTTTGTTATCTGCC  50

seq1  TAAAGGTGAATGAAGGTTGTTTTTTTTTTGTTTGTTTGTTTGCTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGAATGAAGGTTGTTTTTTTTTTGTTTGTTTGTTTGCTTGTTTT  100

seq1  GTTTTGTTTTGTTTTTTCTCTCATCTCCTCCTGGTATACAATTGACCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTTTCTCTCATCTCCTCCTGGTATACAATTGACCTGA  150

seq1  TTGAATAAACAGAGAAAGTGGAAGGGCTCTAGTTGCCTAGTTGGGGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAACAGAGAAAGTGGAAGGGCTCTAGTTGCCTAGTTGGGGAATG  200

seq1  GGGATGTAGATTACTACAGGAAACAGAGGGGGGAGGATAAAATCACAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTAGATTACTACAGGAAACAGAGGGGGGAGGATAAAATCACAATA  250

seq1  AGCATGTCTGAAAAATTTACAAATAATCATACTATTAACTATCTATCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTCTGAAAAATTTACAAATAATCATACTATTAACTATCTATCTAA  300

seq1  AAAGACACCATAGACATAAGTCTGTGTATAAAGATACATATACAGTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACACCATAGACATAAGTCTGTGTATAAAGATACATATACAGTTTAA  350

seq1  GAGAAAGTTTGTCATCTTTACTGTCAATGTTCGCTCCTAGAGCTGAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTTTGTCATCTTTACTGTCAATGTTCGCTCCTAGAGCTGAACAA  400

seq1  GAAAAATGCAGCAGACTTCTTGATGTGTATGCGGTAAGAGCATGAGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATGCAGCAGACTTCTTGATGTGTATGCGGTAAGAGCATGAGTCTC  450

seq1  CAATCCTACAAAAAGAACTACAGAAAACTAAGAAATGCTGATAGTTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTACAAAAAGAACTACAGAAAACTAAGAAATGCTGATAGTTGGAG  500

seq1  AAATAGTCCTCACTAGGAATGAACTCATCAGTTGATTATCTAATACCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTCCTCACTAGGAATGAACTCATCAGTTGATTATCTAATACCTAA  550

seq1  TAGCCAGTTTTGAAGCCATATATACAAATAACATAGAGACTGAGCAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGTTTTGAAGCCATATATACAAATAACATAGAGACTGAGCAGTTT  600

seq1  GATCTATATATATATTTATTTTTGCATCCATATATGTGCTTGTAACATCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATATATATATTTATTTTTGCATCCATATATGTGCTTGTAACATCG  650

seq1  ATGAAAAGGTTATGACTTTGAGAGGAGGTATACATACTCACTTGAATGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGGTTATGACTTTGAGAGGAGGTATACATACTCACTTGAATGAG  700

seq1  TAAATAATGAATGAAGTAATATTTTCATGTAAAAATATTATAGAGAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATGAATGAAGTAATATTTTCATGTAAAAATATTATAGAGAAGTA  750

seq1  AGTGAAATAAGATTAAAATACAGATTATTGGTAGAACACTTGCTTAGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAATAAGATTAAAATACAGATTATTGGTAGAACACTTGCTTAGCAT  800

seq1  GCCTGAGATTGAATGTTATCCAAGAGTGAAAAAAAAAAA--GGAGAAAAG  848
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  GCCTGAGATTGAATGTTATCCAAGAGTGAAAAAAAAAAAAGGGAGAAAAG  850

seq1  ATGGTAAGAATTTCCAGAATGATATAATAGAAATG-TTCAGACAGTGCTA  897
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGGTAAGAATTTCCAGAATGATATAATAGAAATGTTTCAGACAGTGCTA  900

seq1  CTTTTAAAATATAAAAACTAGAAAACAGAAGATTCAATTCAAATCTAAAA  947
      | |||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  C-TTTAAAATATAAAAACTAGAAAACAGAAGATTCAATTC-AATCT-AAA  947

seq1  ATAAAACAGGTAGTAAATAAAATGTATTACTATAGAGTTAAAATGTGAAA  997
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  ATAAAACAGGTAGT-AATAAAATGTATTACTATAGAGTT-AAATGTGAAA  995

seq1  CTTTGGAACATAAAATAAAACTTCACAACATGTAATAAATGGAAATATTA  1047
      |||||||||||||||||||  ||||| |||||||||||||||||||||| 
seq2  CTTTGGAACATAAAATAAACTTTCAC-ACATGTAATAAATGGAAATATT-  1043

seq1  ATAATAGATTT-ATTGAAATATCATTTAAACACTGATA-CTATAAAACAC  1095
      ||||||||||| ||||||||||||||  |||||||||| |||||||||||
seq2  ATAATAGATTTAATTGAAATATCATT--AACACTGATACCTATAAAACAC  1091

seq1  ATATTAT-ATAAATAGATGCACAC--AAATGCAGGCATTCTTTTATCTAA  1142
      ||||||| |||| |||||||||||  || |||  ||  || |||||||| 
seq2  ATATTATAATAAGTAGATGCACACCGAATTGCCAGCCATCGTTTATCTA-  1140

seq1  GAACGAGACTGG  1154
        ||||||||||
seq2  -GACGAGACTGG  1151


| Home | SequenceCutter | Blast | Download |