BAC Information

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BAC

Clone NameB6Ng01-268F04
Chromosome11 (Build37)1 (Build37)
Map Location 63,467,856 - 63,468,021132,707,517 - 132,708,524
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneBC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
Downstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268F04.bB6Ng01-268F04.g
ACCGA071211GA071212
length9471,001
definitionB6Ng01-268F04.b B6Ng01-268F04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(63,467,856 - 63,468,021)(132,707,517 - 132,708,524)
sequence
gaattccaagccagccaggggtatgttgatgcataagtccaactttagtt
ccaagggaataagcaatagtttattctggagtcacatatgagtgactaca
gcctgggatccaggttataccaaaaacagtgttgcagagcagtacagttt
catgaagtttgtccagtaacaaaagaaagccataaattaaggcatgcatt
ttaaaatgtattggtggaaacataaggcaggcaggtgacagaaaattgtg
gagaatttgctatgggcctcagatgctttctgatgacatcttagttttgg
ggacactagtggtctgttagtgtattctaaaagtctctcccgatactcac
ggtgcttggtgagtgactaccgaggggttaaagatagcttgggatgactc
ggctctggatctgcaatgctacagttcccagtcacagaaggtctgattag
tcaagcagcttcgtagaatctttatcccagcctaggctttttctcctggc
aactttcagttcacagttgtcaaaaagcaaagcaaatgaaaaaacaaaac
aaaacaaaagcccaactgctttgacctctggatctgttgtaaaagtgatc
tacattgatgtctttgctgagcacttacaagaaaaactagaagtgtgtgt
ctatgaggaactgagctcatggagcagaggagggtaatgagttaatgacc
aagccaggagtaggacacgccccttccaggttatatctctgtttcctgac
tctttgtcctcttaagcttaagaaacagctgatatggagtaaggaaagaa
gttagtgaatttggatctttatcatatgaccttgtttcccctcttttcct
tttctctctccctttcttttttcttttaaaaatgtgtgtggatgcatgca
tgcgcgcgcgcgcgcgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgc
gaattcaccccacccccacccctgggatgtatggagctgcactgatgcaa
attcagttcagacctgtggaatatgtccacactaagtagcacttctcttt
tatgtgccacgatgaccagcgccctctgtctggagtggcctccgccttct
tacaggcatctagatggagcttagtggaatgaatgcagattctagacaga
cttgcaggagaactcctaacacatatgtattagccaaatactgggtaaga
gtccttgtgttgagaccttgaattcagcttccactcagacctttgggcaa
agcctcctccctcagtggctgtgctctcttcagttctacaggccaccttc
ccagctgcattttctgacaagtggagtcggtaattaactctccaacagtg
actctcctgtacttgctgtctctgcctgcaggtacaaatgcattgagagg
cccgcgactggtgactgggaacactgggggagctgtcaccatccattgcc
attacgccccctcctcagtcaacaggcatcaaagaaaatactggtgccgc
ctggggtctccattgtggatctgtcacactgtcgtgtccaccaaccaata
cactcaccctgactaccgtgggcgcgcggctctcactgacattccacaga
gcggtttgtttgtggtgaggctgctccgactgtccctgggtgacgtggga
ctttaccgctgtggcataggagaccgaaacgacatgctattcttcagcgt
gaatctgactgtgtctgcaggtatgtgcagatggatggctaaagggccaa
tttttgtaaagccaatgtccaaaagaaatgattacaaaagaaggatcaaa
agcccaagaaagttttaacccttagcaacaaatggggtgagtgagggagg
taggagaagactccagaggaaactttgatttagaatagaagtcatcttca
agaaggcagatagcaggggaagcgccctacaaatacacacagggtcttct
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63467856_63468021
seq2: B6Ng01-268F04.b_584_991

seq1  --------------------------------------------------  0
                                                        
seq2  AAAAACAAAACAAAACAAAAGCCCAACTGCTTTGACCTCTGGATCTGTTG  50

seq1  --------------------------------------------------  0
                                                        
seq2  TAAAAGTGATCTACATTGATGTCTTTGCTGAGCACTTACAAGAAAAACTA  100

seq1  --------------------------------------------------  0
                                                        
seq2  GAAGTGTGTGTCTATGAGGAACTGAGCTCATGGAGCAGAGGAGGGTAATG  150

seq1  --------------------------------------------------  0
                                                        
seq2  AGTTAATGACCAAGCCAGGAGTAGGACACGCCCCTTCCAGGTTATATCTC  200

seq1  -------------------------------AAAAACA------------  7
                                     | |||||            
seq2  TGTTTCCTGACTCTTTGTCCTCTTAAGCTTAAGAAACAGCTGATATGGAG  250

seq1  AAACAAAACAGGTTATAGGAATTTATGATCATGAAGCCATATCTTCTTGG  57
       ||  ||| | ||||   ||||||  |||| | |   |||||   |||| 
seq2  TAAGGAAAGAAGTTA-GTGAATTT-GGATCTTTA--TCATATGACCTTG-  295

seq1  GACTGCCACCACACCTGCTCCTCACACTCATTGTATTTCTTTCTGCCACA  107
         |  | || |   | ||  || | |||  | | ||| |||||   | |
seq2  ---TTTCCCCTCTTTTCCTTTTCTCTCTCCCTTTCTTT-TTTCTTTTAAA  341

seq1  AA-ACATTTTAATCCTTTCA-------GTGTGTGTGTGTGTGTGTGTGTG  149
      ||    | |  || | | ||       | | | | | | |||||||||||
seq2  AATGTGTGTGGATGCATGCATGCGCGCGCGCGCGCGCGCGTGTGTGTGTG  391

seq1  TGTGTGTGTGTGTGTGC  166
      |||||||||||||||||
seq2  TGTGTGTGTGTGTGTGC  408

seq1: chr1_132707517_132708524
seq2: B6Ng01-268F04.g_65_1065

seq1  GAATTCACCCCACCCCCACCCCTGGGATGTATGGAGCTGCACTGATGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCCACCCCCACCCCTGGGATGTATGGAGCTGCACTGATGCAA  50

seq1  ATTCAGTTCAGACCTGTGGAATATGTCCACACTAAGTAGCACTTCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTTCAGACCTGTGGAATATGTCCACACTAAGTAGCACTTCTCTTT  100

seq1  TATGTGCCACGATGACCAGCGCCCTCTGTCTGGAGTGGCCTCCGCCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCCACGATGACCAGCGCCCTCTGTCTGGAGTGGCCTCCGCCTTCT  150

seq1  TACAGGCATCTAGATGGAGCTTAGTGGAATGAATGCAGATTCTAGACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCATCTAGATGGAGCTTAGTGGAATGAATGCAGATTCTAGACAGA  200

seq1  CTTGCAGGAGAACTCCTAACACATATGTATTAGCCAAATACTGGGTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGAGAACTCCTAACACATATGTATTAGCCAAATACTGGGTAAGA  250

seq1  GTCCTTGTGTTGAGACCTTGAATTCAGCTTCCACTCAGACCTTTGGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGTGTTGAGACCTTGAATTCAGCTTCCACTCAGACCTTTGGGCAA  300

seq1  AGCCTCCTCCCTCAGTGGCTGTGCTCTCTTCAGTTCTACAGGCCACCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCTCCCTCAGTGGCTGTGCTCTCTTCAGTTCTACAGGCCACCTTC  350

seq1  CCAGCTGCATTTTCTGACAAGTGGAGTCGGTAATTAACTCTCCAACAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCATTTTCTGACAAGTGGAGTCGGTAATTAACTCTCCAACAGTG  400

seq1  ACTCTCCTGTACTTGCTGTCTCTGCCTGCAGGTACAAATGCATTGAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCTGTACTTGCTGTCTCTGCCTGCAGGTACAAATGCATTGAGAGG  450

seq1  CCCGCGACTGGTGACTGGGAACACTGGGGGAGCTGTCACCATCCATTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCGACTGGTGACTGGGAACACTGGGGGAGCTGTCACCATCCATTGCC  500

seq1  ATTACGCCCCCTCCTCAGTCAACAGGCATCAAAGAAAATACTGGTGCCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACGCCCCCTCCTCAGTCAACAGGCATCAAAGAAAATACTGGTGCCGC  550

seq1  CTGGGGTCTCCATTGTGGATCTGTCACACTGTCGTGTCCACCAACCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTCTCCATTGTGGATCTGTCACACTGTCGTGTCCACCAACCAATA  600

seq1  CACTCACCCTGACTACCGTGGGCGCGCGGCTCTCACTGACATTCCACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACCCTGACTACCGTGGGCGCGCGGCTCTCACTGACATTCCACAGA  650

seq1  GCGGTTTGTTTGTGGTGAGGCTGCTCCGACTGTCCCTGGGTGACGTGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTTTGTTTGTGGTGAGGCTGCTCCGACTGTCCCTGGGTGACGTGGGA  700

seq1  CTTTACCGCTGTGGCATAGGAGACCGAAACGACATGCTATTCTTCAGCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCGCTGTGGCATAGGAGACCGAAACGACATGCTATTCTTCAGCGT  750

seq1  GAATCTGACTGTGTCTGCAGGTATGTGCAGATGGATGGCTAAAGGGCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGACTGTGTCTGCAGGTATGTGCAGATGGATGGCTAAAGGGCCAA  800

seq1  TTTTTGTAAAGCCAATGTCCAAAAGAAATGATTACAAAAGAAGGATCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTAAAGCCAATGTCCAAAAGAAATGATTACAAAAGAAGGATCAAA  850

seq1  AGCCCAAGAAAGTTTTAACCCTTAGGCAACAAAAGGGGGTGAGTGAGGGA  900
      |||||||||||||||||||||||| ||||| ||| |||||||||||||||
seq2  AGCCCAAGAAAGTTTTAACCCTTA-GCAAC-AAATGGGGTGAGTGAGGGA  898

seq1  GGTAGGAGAAAGACTCCAGGAGGAAAACTTTTGATTTAG-ATAGAAGTCA  949
      |||||||| ||||||||| |||||||   |||||||||| ||||||||||
seq2  GGTAGGAG-AAGACTCCA-GAGGAAA--CTTTGATTTAGAATAGAAGTCA  944

seq1  TCTTCAAGAAGGCAGATAGCAGGGGAAAGCGCCCAACAAAATACACACAG  999
      ||||||||||||||||||||||||| |||||||| || ||||||||||||
seq2  TCTTCAAGAAGGCAGATAGCAGGGG-AAGCGCCCTAC-AAATACACACAG  992

seq1  GGTCTCCTG  1008
      ||||| |||
seq2  GGTCTTCTG  1001