BAC Information

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BAC

Clone NameB6Ng01-268F12
Chromosome1 (Build37)
Map Location 187,098,830 - 187,272,991
singlet/doubletdoublet
Overlap geneIars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138
Upstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1
Downstream geneSlc30a10, 5033404E19Rik, LOC677785, Lyplal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268F12.bB6Ng01-268F12.g
ACCGA071225GA071226
length7161,128
definitionB6Ng01-268F12.b B6Ng01-268F12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(187,272,276 - 187,272,991)(187,098,830 - 187,099,966)
sequence
gaattcacctgcggttatggacactgtgactttggactgcaggtctcacc
ccttctccaggtaacaagggcagcccagagagtcactacgacactgactg
ctgcttgtcaactcagatctagaatcagtcgcttgggaaatatgggaaat
cctgatggattaactgcagtgggaagctaggcagcactattccatgatct
gggttcctgggccgttcgaaaagtagaaagggtgttgagcagggtgtgga
attctcagcgattcctgagggctcagagacatcgattcctgagagctcag
agacatcgattcctgagggctcagagacatcgattcctgagggctcagag
acatcgattcctgagggctcagagacagcgattcctgagggctcagagac
aagctgccctgcctcctgctccatgacttcttcactgggacacactgcgt
cctcgaagtctcagctcaaaccagcccttcctttcctgaatggcgtttgt
caggtgttcctcacagcaaagagaagaacaatgaataggggaactcttgt
actcaaggcctgcctgtggaggtgtgggaatgatttgtgactggggcaag
aagaggagagcattagaggccaaaccaggaagttcggaaacacctcccat
tcagagttcaacactacatactgtatcatgtgaagtctgatgggggcagg
ggggggcaaggggggg

gaattcatctcaggtaatgaggtcatgttttcagactcagctccactgtc
ctctgtgaactctcaggtagttttcctgaaggtagagcttccacctccca
tttggcctgtaaacatagtcatgcttgagtcagtgcctactgaatcaagg
acatctttgttagcccggagtgtaattcttatgtgttctggtggtttctt
ttgtaaccactgaagattattgtgttttccacaaacagagctcttaggtt
ctttactaggaagctctaggcagcacagctacttgcacacaaactgagag
ctgggtttaccaacctctgttgcctgcctgccttccttccgttcttccgt
ctgcctgtcctgttatctttcaggctcccctgctcctttctttctatctg
acagagcctcactgcctagccttgaactttaaaattcaaggtctcctttc
ctctcatggcctgggagttcagcagtgagctgctcgaccatgcctgcagg
gacttttcttattacttcaaaatatagtttattggggagaagggtttttt
attagacatatttatttatttcactttactttcatgagtattttgcctgt
gtgcctctatgtgcaccatgtgtaagcctgttgaagccctagatgattgt
gagctatggtgtgggtacagggaattgaacctaggtctctgcaagagcaa
cagtgctctaactgctgggtgtctctccagcccaagaattatttatggaa
agttgttattcatgagttcagtgtgactttttttgtgatatagtatttga
gtgcttccacaaaaaaattgctcttattgttggtagccaaccaacagtta
attcctggcatgtgtatttatagctgcatttctggctgcttttatttcct
gtaccattctcatgccttttagtttaaattgctaaatattacatttcctg
tctgtttcagttgggaaatctcaaagatagttgtgcgaaaggtgagtgga
gtctccctgtcaaacctacacacctgtctacatagtgtctgcttactgta
ggatgcacttgtcttactggcttgagtgatcctctctggaagacaagaac
gaaaggaagggcctgccttaggacatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_187272276_187272991
seq2: B6Ng01-268F12.b_46_761 (reverse)

seq1  CCCCCCCTTGCCCCCCCCTGCCCCCATCAGACTTCACATGATACAGTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCTTGCCCCCCCCTGCCCCCATCAGACTTCACATGATACAGTATG  50

seq1  TAGTGTTGAACTCTGAATGGGAGGTGTTTCCGAACTTCCTGGTTTGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTGAACTCTGAATGGGAGGTGTTTCCGAACTTCCTGGTTTGGCCT  100

seq1  CTAATGCTCTCCTCTTCTTGCCCCAGTCACAAATCATTCCCACACCTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGCTCTCCTCTTCTTGCCCCAGTCACAAATCATTCCCACACCTCCA  150

seq1  CAGGCAGGCCTTGAGTACAAGAGTTCCCCTATTCATTGTTCTTCTCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGCCTTGAGTACAAGAGTTCCCCTATTCATTGTTCTTCTCTTTG  200

seq1  CTGTGAGGAACACCTGACAAACGCCATTCAGGAAAGGAAGGGCTGGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGGAACACCTGACAAACGCCATTCAGGAAAGGAAGGGCTGGTTTG  250

seq1  AGCTGAGACTTCGAGGACGCAGTGTGTCCCAGTGAAGAAGTCATGGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGACTTCGAGGACGCAGTGTGTCCCAGTGAAGAAGTCATGGAGCA  300

seq1  GGAGGCAGGGCAGCTTGTCTCTGAGCCCTCAGGAATCGCTGTCTCTGAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGGGCAGCTTGTCTCTGAGCCCTCAGGAATCGCTGTCTCTGAGC  350

seq1  CCTCAGGAATCGATGTCTCTGAGCCCTCAGGAATCGATGTCTCTGAGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGAATCGATGTCTCTGAGCCCTCAGGAATCGATGTCTCTGAGCCC  400

seq1  TCAGGAATCGATGTCTCTGAGCTCTCAGGAATCGATGTCTCTGAGCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATCGATGTCTCTGAGCTCTCAGGAATCGATGTCTCTGAGCCCTC  450

seq1  AGGAATCGCTGAGAATTCCACACCCTGCTCAACACCCTTTCTACTTTTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCGCTGAGAATTCCACACCCTGCTCAACACCCTTTCTACTTTTCG  500

seq1  AACGGCCCAGGAACCCAGATCATGGAATAGTGCTGCCTAGCTTCCCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCCCAGGAACCCAGATCATGGAATAGTGCTGCCTAGCTTCCCACTG  550

seq1  CAGTTAATCCATCAGGATTTCCCATATTTCCCAAGCGACTGATTCTAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATCCATCAGGATTTCCCATATTTCCCAAGCGACTGATTCTAGAT  600

seq1  CTGAGTTGACAAGCAGCAGTCAGTGTCGTAGTGACTCTCTGGGCTGCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTGACAAGCAGCAGTCAGTGTCGTAGTGACTCTCTGGGCTGCCCT  650

seq1  TGTTACCTGGAGAAGGGGTGAGACCTGCAGTCCAAAGTCACAGTGTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCTGGAGAAGGGGTGAGACCTGCAGTCCAAAGTCACAGTGTCCAT  700

seq1  AACCGCAGGTGAATTC  716
      ||||||||||||||||
seq2  AACCGCAGGTGAATTC  716


seq1: chr1_187098830_187099966
seq2: B6Ng01-268F12.g_66_1193

seq1  GAATTCATCTCAGGTAATGAGGTCATGTTTTCAGACTCAGCTCCACTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCAGGTAATGAGGTCATGTTTTCAGACTCAGCTCCACTGTC  50

seq1  CTCTGTGAACTCTCAGGTAGTTTTCCTGAAGGTAGAGCTTCCACCTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGAACTCTCAGGTAGTTTTCCTGAAGGTAGAGCTTCCACCTCCCA  100

seq1  TTTGGCCTGTAAACATAGTCATGCTTGAGTCAGTGCCTACTGAATCAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTGTAAACATAGTCATGCTTGAGTCAGTGCCTACTGAATCAAGG  150

seq1  ACATCTTTGTTAGCCCGGAGTGTAATTCTTATGTGTTCTGGTGGTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTGTTAGCCCGGAGTGTAATTCTTATGTGTTCTGGTGGTTTCTT  200

seq1  TTGTAACCACTGAAGATTATTGTGTTTTCCACAAACAGAGCTCTTAGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACCACTGAAGATTATTGTGTTTTCCACAAACAGAGCTCTTAGGTT  250

seq1  CTTTACTAGGAAGCTCTAGGCAGCACAGCTACTTGCACACAAACTGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTAGGAAGCTCTAGGCAGCACAGCTACTTGCACACAAACTGAGAG  300

seq1  CTGGGTTTACCAACCTCTGTTGCCTGCCTGCCTTCCTTCCGTTCTTCCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTACCAACCTCTGTTGCCTGCCTGCCTTCCTTCCGTTCTTCCGT  350

seq1  CTGCCTGTCCTGTTATCTTTCAGGCTCCCCTGCTCCTTTCTTTCTATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTCCTGTTATCTTTCAGGCTCCCCTGCTCCTTTCTTTCTATCTG  400

seq1  ACAGAGCCTCACTGCCTAGCCTTGAACTTTAAAATTCAAGGTCTCCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCTCACTGCCTAGCCTTGAACTTTAAAATTCAAGGTCTCCTTTC  450

seq1  CTCTCATGGCCTGGGAGTTCAGCAGTGAGCTGCTCGACCATGCCTGCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATGGCCTGGGAGTTCAGCAGTGAGCTGCTCGACCATGCCTGCAGG  500

seq1  GACTTTTCTTATTACTTCAAAATATAGTTTATTGGGGAGAAGGGTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTCTTATTACTTCAAAATATAGTTTATTGGGGAGAAGGGTTTTTT  550

seq1  ATTAGACATATTTATTTATTTCACTTTACTTTCATGAGTATTTTGCCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACATATTTATTTATTTCACTTTACTTTCATGAGTATTTTGCCTGT  600

seq1  GTGCCTCTATGTGCACCATGTGTAAGCCTGTTGAAGCCCTAGATGATTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTATGTGCACCATGTGTAAGCCTGTTGAAGCCCTAGATGATTGT  650

seq1  GAGCTATGGTGTGGGTACAGGGAATTGAACCTAGGTCTCTGCAAGAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATGGTGTGGGTACAGGGAATTGAACCTAGGTCTCTGCAAGAGCAA  700

seq1  CAGTGCTCTAACTGCTGGGTGTCTCTCCAGCCCAAGAATTATTTATGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTCTAACTGCTGGGTGTCTCTCCAGCCCAAGAATTATTTATGGAA  750

seq1  AGTTGTTATTCATGAGTTCAGTGTGACTTTTTTTGTGATATAGTATTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTATTCATGAGTTCAGTGTGACTTTTTTTGTGATATAGTATTTGA  800

seq1  GTGCTTCCACAAAAAAATTGCTCTTATTGTTGGTAGCCAACCAACAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCCACAAAAAAATTGCTCTTATTGTTGGTAGCCAACCAACAGTTA  850

seq1  ATTCCTGGCATGTGTATTTATAGCTGCATTTCTGGCTGCTTTTTATTTCC  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTCCTGGCATGTGTATTTATAGCTGCATTTCTGGCTGC-TTTTATTTCC  899

seq1  TGTACCATTCTCATGCCTTTTAGTTTAAATTGCTAAATATTACATTTCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCATTCTCATGCCTTTTAGTTTAAATTGCTAAATATTACATTTCCT  949

seq1  GTCTGTTTCAGGTTGGGAAATCTCCAAAGGATAGGTTGTGCCGAAGGGTG  1000
      |||||||||| |||||||||||||  || |||| |||||| |||| ||||
seq2  GTCTGTTTCA-GTTGGGAAATCTC--AAAGATA-GTTGTG-CGAAAGGTG  994

seq1  AGT-GAGTCTCCCTGTCAAACCTACACA-CTGTCTACATAGTGTCTGTCT  1048
      ||| |||||||||||||||||||||||| |||||||||||||||||| ||
seq2  AGTGGAGTCTCCCTGTCAAACCTACACACCTGTCTACATAGTGTCTG-CT  1043

seq1  TACTGTAGGAGTGCACTTGTTCTTACT-GCTGAGGTGAT-CTCTCTGGAG  1096
      |||||||||| |||||||| ||||||| |||   ||||| ||||||||| 
seq2  TACTGTAGGA-TGCACTTG-TCTTACTGGCTTGAGTGATCCTCTCTGGA-  1090

seq1  AGAACAAGGAACAGAAAGAGAGTG-CTGCTTTAAGGACATAG  1137
      || |||| |||| |||||  || | |||| || |||||||||
seq2  AG-ACAA-GAAC-GAAAGGAAGGGCCTGCCTT-AGGACATAG  1128


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