BAC Information

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BAC

Clone NameB6Ng01-268J05
Chromosome1 (Build37)
Map Location 110,671,082 - 110,672,237
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435640, EG626474
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268J05.bB6Ng01-268J05.g
ACCGA071397GA071398
length5501,143
definitionB6Ng01-268J05.b B6Ng01-268J05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ttcagtcccacttgggagaaagaagaaagcaatcacaagtggggagggtg
ggaggggcttaggaggacacagggggctgaagtggggggcttatctggat
ttgggtgagggaaaagtactgaagccctgtgggtcagcacaaagaatgga
aacaggcaacctcaggaggtaggaggttgggggcaccttccaggatgctt
cagagacctggaaggtgagagacttccaggaatcaaaggaagggacatta
gatgaaatgctgacagtaggaagagggaacttatagagcccaccatccag
caggaagacaggacatcaattgagggatagggttgccattcccacagtca
catctctgacccataattgttcctgtttgaaagaattacaaagatggaaa
tggagaggagcctgaggaaaagaaggtctagcaacaggtccaaagtggaa
tacagctcaagggtatttcccaagggctagcactatttattgagactatg
gattgctcgcataaaggaaatatgtcatgtcttttggatgaaagacctaa


gaattcacagcagaggagactcaagtgtctgaggaggacttaaaaagttt
tcaaagtccttaatcaacagtgaaatgaaaatcaaagcaaccctgagatt
ctaccttacaccaatcagaatgactaagatcaaaacctcaggtgacaaca
catgttggtgaggatatggagaaagaggaaaactcctccattgctggttg
tattgcaaagggttacaatcacttcattctggaaatcaatctggaggttc
ctaagaaaattggaaattgacctatctgaagacccagcaataccagtctt
gggcatgtacccaaaagattacccaccatgctacaagggtacttttcccc
atatattcataatggccttgtttttatttgctgcttttatatggctatat
tgacagcaaaaatctttaaatttaaaaataccctttgtaagcatgctcat
agtcatgctcttagaaatatatgcataagtttaaagaccctttgaaaata
ttcccacatgcataaatactcattgagtatgtattcatcttagtgtctaa
tgcaataaacaggtttggacataattacacatctctgagagcagggattg
taaggaatttggatttagcttttagtgttattgtcccttttacttgaaaa
ccattttccatgaatttaaagatatattagatggacttagagctggcttt
aaagtatacaaatattttcctttgagtgtgcaaagaagttttatttattt
atttatttatttatttatacttacttacttacttacttacttacaaagga
ctttagaacagcaggtggtgacattttttttctccagatcaattatatat
ttatgtcagcaatgtagttcaagataatttaattatgtgcaacatgttgt
gtgaagcaacttagcactgaagaaaaaaatcctttactacataattttaa
aaatgaaatactttttagaatattttgaaaatgattaaatgataatgtat
tacaagatagctatagagtgagattattcttttcttatctttgcgtagca
taatatgagacacactgaatatatggccacttttttctagactgtctcaa
atcatcctttaaggttttatccacagtcttttcaatgttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_110671082_110672237
seq2: B6Ng01-268J05.g_65_1207 (reverse)

seq1  CAACAACAATGAAAACCACCTGTGGAATTAAAACCTTTAAAAGGATGATT  50
      |||||||| ||||||    |||||||  |||||||||  |||||||||||
seq2  CAACAACATTGAAAA--GACTGTGGA--TAAAACCTT--AAAGGATGATT  44

seq1  TTGAAGACAGTCTAGAAAAAGGTTGGCCATATA-TCAGTTGTGTCTCATA  99
      |   |||||||||||||||| | |||||||||| |||| |||||||||||
seq2  T--GAGACAGTCTAGAAAAAAG-TGGCCATATATTCAG-TGTGTCTCATA  90

seq1  TTATGCTACGCAAAAGATAAGAAAAGAAATAATTCTCACTCTATAGCTTA  149
      ||||||||||| |||||||||||||| ||||| |||||||||||||||  
seq2  TTATGCTACGC-AAAGATAAGAAAAG-AATAA-TCTCACTCTATAGCT--  135

seq1  TTCTTGTAATACATTATCATTTAATCATTTTCAAAATATTCTAAAAAGTA  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTAATACATTATCATTTAATCATTTTCAAAATATTCTAAAAAGTA  185

seq1  TTTCATTTTTAAAATTATGTAGTAAAGGATTTTTTTCTTCAGTGCTAAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTTTAAAATTATGTAGTAAAGGATTTTTTTCTTCAGTGCTAAGT  235

seq1  TGCTTCACACAACATGTTGCACATAATTAAATTATCTTGAACTACATTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACACAACATGTTGCACATAATTAAATTATCTTGAACTACATTGC  285

seq1  TGACATAAATATATAATTGATCTGGAG-AAAAAAATGTCACCACCTGCTG  348
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGACATAAATATATAATTGATCTGGAGAAAAAAAATGTCACCACCTGCTG  335

seq1  TTCTAAAGTCCTTTGTAAGTAAGTAAGTAAGTAAGTAAGTATAAATAAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGTCCTTTGTAAGTAAGTAAGTAAGTAAGTAAGTATAAATAAAT  385

seq1  AAATAAATAAATAAATAAAACTTCTTTGCACACTCAAAGGAAAATATTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATAAATAAAACTTCTTTGCACACTCAAAGGAAAATATTTG  435

seq1  TATACTTTAAAGCCAGCTCTAAGTCCATCTAATATATCTTTAAATTCATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTAAAGCCAGCTCTAAGTCCATCTAATATATCTTTAAATTCATG  485

seq1  GAAAATGGTTTTCAAGTAAAAGGGACAATAACACTAAAAGCTAAATCCAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGGTTTTCAAGTAAAAGGGACAATAACACTAAAAGCTAAATCCAA  535

seq1  ATTCCTTACAATCCCTGCTCTCAGAGATGTGTAATTATGTCCAAACCTGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTACAATCCCTGCTCTCAGAGATGTGTAATTATGTCCAAACCTGT  585

seq1  TTATTGCATTAGACACTAAGATGAATACATACTCAATGAGTATTTATGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCATTAGACACTAAGATGAATACATACTCAATGAGTATTTATGCA  635

seq1  TGTGGGAATATTTTCAAAGGGTCTTTAAACTTATGCATATATTTCTAAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAATATTTTCAAAGGGTCTTTAAACTTATGCATATATTTCTAAGA  685

seq1  GCATGACTATGAGCATGCTTACAAAGGGTATTTTTAAATTTAAAGATTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACTATGAGCATGCTTACAAAGGGTATTTTTAAATTTAAAGATTTT  735

seq1  TGCTGTCAATATAGCCATATAAAAGCAGCAAATAAAAACAAGGCCATTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCAATATAGCCATATAAAAGCAGCAAATAAAAACAAGGCCATTAT  785

seq1  GAATATATGGGGAAAAGTACCCTTGTAGCATGGTGGGTAATCTTTTGGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATGGGGAAAAGTACCCTTGTAGCATGGTGGGTAATCTTTTGGGT  835

seq1  ACATGCCCAAGACTGGTATTGCTGGGTCTTCAGATAGGTCAATTTCCAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCCAAGACTGGTATTGCTGGGTCTTCAGATAGGTCAATTTCCAAT  885

seq1  TTTCTTAGGAACCTCCAGATTGATTTCCAGAATGAAGTGATTGTAACCCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAGGAACCTCCAGATTGATTTCCAGAATGAAGTGATTGTAACCCT  935

seq1  TTGCAATACAACCAGCAATGGAGGAGTTTTCCTCTTTCTCCATATCCTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAATACAACCAGCAATGGAGGAGTTTTCCTCTTTCTCCATATCCTCA  985

seq1  CCAACATGTGTTGTCACCTGAGGTTTTGATCTTAGTCATTCTGATTGGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATGTGTTGTCACCTGAGGTTTTGATCTTAGTCATTCTGATTGGTG  1035

seq1  TAAGGTAGAATCTCAGGGTTGCTTTGATTTTCATTTCACTGTTGATTAAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTAGAATCTCAGGGTTGCTTTGATTTTCATTTCACTGTTGATTAAG  1085

seq1  GACTTTGAAAACTTTTTAAGTCCTCCTCAGACACTTGAGTCTCCTCTGCT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGAAAACTTTTTAAGTCCTCCTCAGACACTTGAGTCTCCTCTGCT  1135

seq1  GTGAATTC  1156
      ||||||||
seq2  GTGAATTC  1143


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