MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-268P01
Chromosome	1 (Build37)
Map Location	33,480,641 - 33,589,038
singlet/doublet	doublet
Overlap gene	Prim2
Upstream gene	Khdrbs2, EG408191, EG633498, LOC213711, LOC100040828, EG666108
Downstream gene	1700001G17Rik, Rab23, Bag2, Zfp451, OTTMUSG00000022109, B230209C24Rik, Dst, LOC100040913, LOC383629, LOC100040938, Ccdc115, Imp4, Ptpn18, Tesp1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Khdrbs2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170771 MGI:2159649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG408191 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:408191 MGI:3644687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 14 Proteins

name	EG633498 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633498 MGI:3643085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 4 Proteins pseudo : _no_value

name	LOC213711 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213711
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100040828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	EG666108 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666108 MGI:3643452
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Prim2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19076 MGI:97758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700001G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67503 MGI:1914753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 3 ESTs

name	Rab23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19335 MGI:99833
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bag2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213539 MGI:1891254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp451 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98403 MGI:2137896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000022109 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433287 MGI:3705563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 151 ESTs, 11 Proteins

name	B230209C24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320705 MGI:2444572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dst (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13518 MGI:104627
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100040913 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs

name	LOC383629 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383629
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC100040938 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040938
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Ccdc115 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69668 MGI:1916918
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Imp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27993 MGI:106572
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ptpn18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19253 MGI:108410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tesp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21755 MGI:1270856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Khdrbs2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20143979 GeneID:170771 MGI:2159649
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : KH domain containing, RNA binding, signal transduction associated 2 transcript_id : NM_133235.2

name	EG408191 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363244 GeneID:408191 MGI:3644687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 14 Proteins product : predicted gene, EG408191 transcript_id : XM_887934.2

name	LOC100040828 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233781 GeneID:100040828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001475345.1

name	Prim2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679460 GeneID:19076 MGI:97758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA primase, p58 subunit transcript_id : NM_008922.1

name	Rab23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377153 GeneID:19335 MGI:99833
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB23, member RAS oncogene family transcript_id : NM_008999.3

name	Bag2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92110031 GeneID:213539 MGI:1891254
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bcl2-associated athanogene 2 transcript_id : NM_145392.2

name	Zfp451 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370012 GeneID:98403 MGI:2137896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 451 transcript_id : NM_133817.2

name	OTTMUSG00000022109 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363253 GeneID:433287 MGI:3705563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 99 ESTs, 2 Proteins product : predicted gene, OTTMUSG00000022109, transcript variant 4 transcript_id : XM_897987.2

name	OTTMUSG00000022109 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363252 GeneID:433287 MGI:3705563
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 101 ESTs, 2 Proteins product : predicted gene, OTTMUSG00000022109, transcript variant 3 transcript_id : XM_897976.2

name	B230209C24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254313 GeneID:320705 MGI:2444572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230209C24 gene transcript_id : NM_177235.3

name	Dst (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154075 GeneID:13518 MGI:104627
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dystonin transcript_id : NM_134448.2

name	Dst (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154081 GeneID:13518 MGI:104627
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dystonin transcript_id : NM_133833.2

name	LOC100040913 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233785 GeneID:100040913
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs product : hypothetical protein LOC100040913 transcript_id : XM_001475478.1

name	LOC100040938 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233787 GeneID:100040938
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100040938 transcript_id : XM_001475521.1

name	Ccdc115 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037168 GeneID:69668 MGI:1916918
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 115 transcript_id : NM_027159.1

name	Imp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340630 GeneID:27993 MGI:106572
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) transcript_id : NM_178601.2

name	Ptpn18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113199760 GeneID:19253 MGI:108410
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, non-receptor type 18 transcript_id : NM_011206.2

name	Tesp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130424 GeneID:21755 MGI:1270856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testicular serine protease 1 transcript_id : NM_009355.2

name	Khdrbs2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18875400 CCDS:CCDS14861.1 GeneID:170771 MGI:2159649
definition	GO_component : GO:0005634 - nucleus [Evidence TAS] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008143 - poly(A) binding [Evidence IDA]; GO:0008266 - poly(U) binding [Evidence IDA]; GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0042169 - SH2 domain binding [Evidence IDA]; GO:0017124 - SH3 domain binding [Evidence IDA]; GO:0005070 - SH3/SH2 adaptor activity [Evidence TAS] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Sam68-like mammalian protein 1 product : KH domain-containing, RNA-binding, signal transduction-associated protein 2 protein_id : NP_573498.1

name	EG408191 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878788 GeneID:408191 MGI:3644687
definition	codon_start : 1 product : sentrin 14 protein_id : XP_893027.1

name	LOC100040828 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233782 GeneID:100040828
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475395.1

name	Prim2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679461 CCDS:CCDS14862.1 GeneID:19076 MGI:97758
definition	GO_component : GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence IEA]; GO:0003899 - DNA-directed RNA polymerase activity [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA]; GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA] codon_start : 1 product : DNA primase, p58 subunit protein_id : NP_032948.1

name	Rab23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543565 GeneID:19335 MGI:99833
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0009953 - dorsal/ventral pattern formation [Evidence IGI] [Evidence IMP]; GO:0042733 - embryonic digit morphogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence IMP]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : open brain 2 product : RAB23, member RAS oncogene family protein_id : NP_033025.2

name	Bag2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703784 CCDS:CCDS14864.1 GeneID:213539 MGI:1891254
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0030188 - chaperone regulator activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006457 - protein folding [Evidence IEA]; GO:0019538 - protein metabolism [Evidence ISS] codon_start : 1 product : Bcl2-associated athanogene 2 protein_id : NP_663367.1

name	Zfp451 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789329 CCDS:CCDS14865.1 GeneID:98403 MGI:2137896
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 451 protein_id : NP_598578.1

name	OTTMUSG00000022109 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878798 GeneID:433287 MGI:3705563
definition	codon_start : 1 product : similar to RNA binding motif protein 10 isoform 4 protein_id : XP_903080.1

name	OTTMUSG00000022109 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878796 GeneID:433287 MGI:3705563
definition	codon_start : 1 product : similar to RNA binding motif protein 10 isoform 3 protein_id : XP_903069.1

name	B230209C24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254314 GeneID:320705 MGI:2444572
definition	codon_start : 1 product : hypothetical protein LOC320705 protein_id : NP_796209.2

name	Dst (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154076 GeneID:13518 MGI:104627
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030056 - hemidesmosome [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IEA]; GO:0045104 - intermediate filament cytoskeleton organization and biogenesis [Evidence ISS]; GO:0008090 - retrograde axon cargo transport [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant b; bullous pemphigoid antigen 1; dystonia musculorum product : dystonin isoform b protein_id : NP_604443.2

name	Dst (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154082 GeneID:13518 MGI:104627
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030056 - hemidesmosome [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence ISS] [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IEA]; GO:0045104 - intermediate filament cytoskeleton organization and biogenesis [Evidence ISS]; GO:0008090 - retrograde axon cargo transport [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant a; bullous pemphigoid antigen 1; dystonia musculorum product : dystonin isoform a protein_id : NP_598594.2

name	LOC100040913 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233786 GeneID:100040913
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475528.1

name	LOC100040938 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233788 GeneID:100040938
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475571.1

name	Ccdc115 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037169 CCDS:CCDS14866.1 GeneID:69668 MGI:1916918
definition	GO_component : GO:0005764 - lysosome [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : coiled-coil domain containing 115 protein_id : NP_081435.1

name	Imp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519917 GeneID:27993 MGI:106572
definition	GO_component : GO:0005730 - nucleolus [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003723 - RNA binding [Evidence ISS]; GO:0030519 - snoRNP binding [Evidence ISS] GO_process : GO:0007046 - ribosome biogenesis [Evidence IEA]; GO:0006364 - rRNA processing [Evidence TAS] codon_start : 1 exception : mismatches in translation product : U3 snoRNP protein 4 homolog protein_id : NP_848716.1

name	Ptpn18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113199761 CCDS:CCDS14867.1 GeneID:19253 MGI:108410
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004726 - non-membrane spanning protein tyrosine phosphatase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA] codon_start : 1 product : protein tyrosine phosphatase, non-receptor type 18 protein_id : NP_035336.2

name	Tesp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678293 CCDS:CCDS14868.1 GeneID:21755 MGI:1270856
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] codon_start : 1 product : testicular serine protease 1 protein_id : NP_033381.1

name	LOC213711 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:213711
definition	number : 1 pseudo : _no_value

name	EG666108 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666108
definition	number : 1 pseudo : _no_value

name	EG666108 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666108
definition	number : 2 pseudo : _no_value

name	LOC383629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383629
definition	number : 1 pseudo : _no_value

name	LOC383629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383629
definition	number : 2 pseudo : _no_value

name	LOC383629 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383629
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128677
definition	standard_name : D1Mit319

name	(CDS detail)
type	STS
link
xref	UniSTS:128929
definition	standard_name : D1Mit70

name	(CDS detail)
type	STS
link
xref	UniSTS:123188
definition	standard_name : 13.MMHAP88FRE7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128774
definition	standard_name : D1Mit411

name	(CDS detail)
type	STS
link
xref	UniSTS:178370
definition	standard_name : AI323589

name	(CDS detail)
type	STS
link
xref	UniSTS:216706
definition	standard_name : RH133423

name	(CDS detail)
type	STS
link
xref	UniSTS:128627
definition	standard_name : D1Mit277

name	(CDS detail)
type	STS
link
xref	UniSTS:234097
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178372
definition	standard_name : AW545388

name	(CDS detail)
type	STS
link
xref	UniSTS:234100
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178371
definition	standard_name : AI596398

name	(CDS detail)
type	STS
link
xref	UniSTS:128676
definition	standard_name : D1Mit318

name	(CDS detail)
type	STS
link
xref	UniSTS:234098
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234099
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:123887
definition	standard_name : 30.MHAa96c6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:258462
definition	standard_name : px-8a1

name	(CDS detail)
type	STS
link
xref	UniSTS:234101
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:247835
definition	standard_name : BF405229

name	(CDS detail)
type	STS
link
xref	UniSTS:178373
definition	standard_name : AW554249

name	(CDS detail)
type	STS
link
xref	UniSTS:142284
definition	standard_name : RH125719

name	(CDS detail)
type	STS
link
xref	UniSTS:161723
definition	standard_name : RH124901

name	(CDS detail)
type	STS
link
xref	UniSTS:167274
definition	standard_name : C86466

name	(CDS detail)
type	STS
link
xref	UniSTS:178368
definition	standard_name : AI427118

name	(CDS detail)
type	STS
link
xref	UniSTS:144301
definition	standard_name : Ptpn18

name	(CDS detail)
type	STS
link
xref	UniSTS:163245
definition	standard_name : U52523

name	EG633498 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233800 GeneID:633498 MGI:3643085
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 ESTs, 4 Proteins product : predicted gene, EG633498 pseudo : _no_value transcript_id : XR_001827.2

name	1700001G17Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149233801 GeneID:67503 MGI:1914753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 3 ESTs product : RIKEN cDNA 1700001G17 gene transcript_id : XR_035301.1

clone name	MSMg01-506J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334D13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-438E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504H21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-070H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171O21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-296D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-161O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194B02
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-268P01.b	B6Ng01-268P01.g
ACC	GA071670	GA071671
length	992	1,115
definition	B6Ng01-268P01.b	B6Ng01-268P01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(33,588,040 - 33,589,038)	(33,480,641 - 33,481,460)
sequence	gaattcctgctggtaagaactataactggagaatggttgtgtgtccttta ggtcaggtgtcatgttctgtggtcatgtagttccttcttttcggcctgac ccagacagaggcagtttcctgctattgcaggatttgatgctgttattgtc ctcccactgcccgtagccagggttatatcccacacctactaggtgccatg tgatctgcagagtgaagtgcaacatatgcctacagatgtctctgatatct tttgttttccttctgaatgaaattcttatattttataaatcagtttgccc taaaattttgctggttccacacgtaagtaaaagaggttgcttcttagctc tagtggatacttgattctgtgcaatcatgacagattcgcttccttccatc tcagtatggtaattgtcacctagaatttagattaactaccgatgtctctt tgagtccttgaaacttgaacaaactgtacatttgtttagggctttcattc tccatggagttcattcaagactggttgctaggcaactaggcctggatgtt gcttttttattgttattaaaccaaatggcttctcattttattactgtgtc agaggcatctgtaggtagggtggcagctggtgtgcatagcttggcacctc ctgttctacagagtaaccctaggggatgtgcctttcaagcatgttggatt gtctcttggctgtcaagtatgatgtttttcttttgatctttcctttttta aggccaaagtggcaaagaactgggctaaagacgtagctcagtgggtagag tgcttttttatagtgagcatgaaaaccttgaggtcgatctctctagcatg acatcagcagggtttggcaacatatgctctttggtgagatagaggcatga ttgattacaactttcaaggtcattctcaactgtgtagagaagctataagg caggtcctagggatggcattgggactttgagggagaagggag	gaattcctaaatttgtacaagtaattttgagtcctcattggcataaaagc tgcagttagagttctgtaaaccttcaggtgtcacaagctaattgcactag gatggaaagcagatttgaaacaaatttacaatcagggaaaacattccttc taggctaggtgtgaaaccgttgcctgataactaaagttgtaaactgggac tggactgtgggtgtaaagatagaaaacgaaatgttggctagatttttcta gacaaaacttcaatactaatgaaacacaggcagatgatttacctcttgac taaactgtgttaacttataacataagaattattgttttaaactcttaatg aacttatagaactactgacagataatagatgcttattagtcttaatgaaa acttgtaaacattcctgctgaaacttcttattcaatttatgatgaacttt tggaatgtaaagacatttggaaaaccatgtgatttattctctgaaaattc tttaagtactaagaagagagctcctggctgacttgccagactaaagagct ctagcaatttatcctttatttaattctccacttctaaaaagcacttgtta attcgtcagactttagtgcttgtttaagcacagaataataagagttaagt tttccagtgcttattctagcatgtagaattaaaaaggaaaagttaagttt cctacaagcccagagatcattagtctgttagctttcatccaacactgtgt cccacttcaacatgttcccctaagggacaggcccccagcaactgtccaat gttctcttgcctccgttttctttgtttaccaacactgagattatatccac atcaataaggtcctttccagtcctaaaacccttacaggaatagtggttat catctgctgacctgagctttgccttaacataactggccttacagtcagtg agacgtttagcccatttgtatctcctcactaagtgttagcagaagctcat aagagcctttgtttcttctcttggcatattattcagaagcttattccact ggtaagtattgaaagatgctccacttatgtttcaatggctagcttattat aatagcagaagctgg
quality values	Open. 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Hide. 62 47 33 47 62 62 62 62 62 62 62 56 38 32 18 27 33 38 36 28 38 56 62 62 47 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 54 56 59 59 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 42 62 62 62 62 46 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 42 62 62 62 51 58 58 58 58 54 58 54 58 54 54 58 54 54 54 58 58 58 58 58 54 42 58 58 58 54 45 42 58 58 54 54 54 58 58 52 58 58 58 58 58 54 58 54 58 58 54 54 58 54 58 58 58 58 58 58 58 54 52 58 41 54 54 42 58 58 54 58 46 49 54 58 58 58 42 54 54 58 58 58 54 54 54 49 58 51 58 58 41 52 53 46 58 51 50 51 52 52 50 58 28 58 58 50 51 50 51 58 50 58 51 54 29 58 39 42 42 38 51 42 53 41 34 58 40 50 50 47 50 50 58 49 54 35 50 53 40 58 50 51 58 58 51 51 47 37 54 51 58 51 50 49 42 46 52 52 53 33 46 58 50 53 58 52 51 46 58 58 32 58 37 54 51 54 58 27 51 32 41 58 53 39 41 47 40 44 25 39 33 39 41 50 52 42 50 31 49 39 52 58 51 32 41 58 39 41 39 50 50 50 53 52 42 38 49 39 51 28 31 38 26 32 33 54 53 41 24 35 51 35 33 41 42 32 39 35 49 39 52 40 44 49 29 29 39 45 54 41 32 46 37 29 45 53 33 31 45 53 51 38 37 14 25 10 54 37 30 12 24 33 39 16 44 51 52 51 26 24 42 23 33 53 39 52 31 37 20 19 52 30 39 28 32 53 40 45 33 27 22 24 32 34 53 40 39 40 53 53 45 32 13 46 8 33 39 53 33 17 16 31 7 7 24 17 33 16 31 35 31 28 23 35 33 31 32 31 33 33 29 39 35 43 36 43 31 30 21 20 9 51 23 32 33 37 51 38 30 27 34 33 29 30 51 32 32 40 40 27 30 46 46 25 19 22 22 26 25 31 17 34 31 31 24 25 36 17 15 21 29 11 14 24 38 34 32 31 21 31 28 31 17 25 15 32 38 21 31 27 48 33 24 21 30 31 34 33 31 36 31 36 26 24 32 26 32 32 11 25 25 33 31 27 46 30 31 26 11 5 5 14 31 18 14 13 21 24 44 10 44 22 26 29 33 18 18 44 9 11 20 11 14 25 20 10 6 7 11 27 19 21 18 36 13 19 11 6 6 11 13 16 13 11 27 4 4 5 18 27 17 28 14 29 13 30 9 18 18 19 48 9 7 4 31 10 11 6 7 10 8 12 5 9 13 43 7 17 9 7 6 9 16 9 10 33 6 5 21 27 7 16 7 6 6 15 38 12 12 27 11 18 15 21 5 20 13 7 6 27 13 7 18 9 21 8 9 28 10 8 6 13 22 23 5 9 11 13 24 20 27 13 29 24 26 6 5 6 5 10 11 9 16 10 32 12 4 4 6 17 4 7 4 2 3 4 9 14 4 8 14 8 5 15 13 9 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_33588040_33589038
seq2: B6Ng01-268P01.b_49_1040 (reverse)

seq1  CTCCCTCTCTCTCCCTCTCCCTCTCCCTCTCCCTC-AAGTCCC-ATG-CA  47
                      ||||||     |||||||| ||||||| ||| ||
seq2  ----------------CTCCCT-----TCTCCCTCAAAGTCCCAATGCCA  29

seq1  T-CCTA-GACCTGCC-TATAGC-TCTCTACACAGTGGAGAATGACCTTG-  92
      | |||| |||||||| |||||| |||||||||||| ||||||||||||| 
seq2  TCCCTAGGACCTGCCTTATAGCTTCTCTACACAGTTGAGAATGACCTTGA  79

seq1  AAGTTGTAATC-ATCATGCCTCTATCT--CCCAAGAGCATATGTTGCCAA  139
      ||||||||||| |||||||||||||||  || ||||||||||||||||||
seq2  AAGTTGTAATCAATCATGCCTCTATCTCACCAAAGAGCATATGTTGCCAA  129

seq1  ACCCTGCTGATGTCATGCTAGAGAGATCGACCTCAAGG-TTTCATGCTCA  188
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACCCTGCTGATGTCATGCTAGAGAGATCGACCTCAAGGTTTTCATGCTCA  179

seq1  CTAT-AAAAAGCACTCTACCCACTGAGCTACGTCCTTAGCCCAGTTCTTT  237
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTATAAAAAAGCACTCTACCCACTGAGCTACGTCTTTAGCCCAGTTCTTT  229

seq1  GCCACTTTGGCCTTAAAAAAGGAAAGATC-AAAGAAAAACATCATACTTG  286
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCCACTTTGGCCTTAAAAAAGGAAAGATCAAAAGAAAAACATCATACTTG  279

seq1  ACAGCCAAGAGACAATCCAACATGCTTGAAAGGCACATCCCCTAGGGTTA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAAGAGACAATCCAACATGCTTGAAAGGCACATCCCCTAGGGTTA  329

seq1  CTCTGTAGAACAGGAGGTGCCAAGCTATGCACACCAGCTGCCACCCTACC  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGAACAGGAGGTGCCAAGCTATGCACACCAGCTGCCACCCTACC  379

seq1  TACAGATGCCTCTGACACAGTAATAAAATGAGAAGCCATTTGGTTTAATA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATGCCTCTGACACAGTAATAAAATGAGAAGCCATTTGGTTTAATA  429

seq1  ACAATAAAAAAGCAACATCCAGGCCTAGTTGCCTAGCAACCAGTCTTGAA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAAAAAGCAACATCCAGGCCTAGTTGCCTAGCAACCAGTCTTGAA  479

seq1  TGAACTCCATGGAGAATGAAAGCCCTAAACAAATGTACAGTTTGTTCAAG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCCATGGAGAATGAAAGCCCTAAACAAATGTACAGTTTGTTCAAG  529

seq1  TTTCAAGGACTCAAAGAGACATCGGTAGTTAATCTAAATTCTAGGTGACA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGACTCAAAGAGACATCGGTAGTTAATCTAAATTCTAGGTGACA  579

seq1  ATTACCATACTGAGATGGAAGGAAGCGAATCTGTCATGATTGCACAGAAT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCATACTGAGATGGAAGGAAGCGAATCTGTCATGATTGCACAGAAT  629

seq1  CAAGTATCCACTAGAGCTAAGAAGCAACCTCTTTTACTTACGTGTGGAAC  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTATCCACTAGAGCTAAGAAGCAACCTCTTTTACTTACGTGTGGAAC  679

seq1  CAGCAAAATTTTAGGGCAAACTGATTTATAAAATATAAGAATTTCATTCA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAATTTTAGGGCAAACTGATTTATAAAATATAAGAATTTCATTCA  729

seq1  GAAGGAAAACAAAAGATATCAGAGACATCTGTAGGCATATGTTGCACTTC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAAACAAAAGATATCAGAGACATCTGTAGGCATATGTTGCACTTC  779

seq1  ACTCTGCAGATCACATGGCACCTAGTAGGTGTGGGATATAACCCTGGCTA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCAGATCACATGGCACCTAGTAGGTGTGGGATATAACCCTGGCTA  829

seq1  CGGGCAGTGGGAGGACAATAACAGCATCAAATCCTGCAATAGCAGGAAAC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCAGTGGGAGGACAATAACAGCATCAAATCCTGCAATAGCAGGAAAC  879

seq1  TGCCTCTGTCTGGGTCAGGCCGAAAAGAAGGAACTACATGACCACAGAAC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGTCTGGGTCAGGCCGAAAAGAAGGAACTACATGACCACAGAAC  929

seq1  ATGACACCTGACCTAAAGGACACACAACCATTCTCCAGTTATAGTTCTTA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACCTGACCTAAAGGACACACAACCATTCTCCAGTTATAGTTCTTA  979

seq1  CCAGCAGGAATTC  999
      |||||||||||||
seq2  CCAGCAGGAATTC  992

seq1: chr1_33480641_33481460
seq2: B6Ng01-268P01.g_358_1181

seq1  CCTCTTGACTAAACTGTGTTAACTTATAACATAAGAATTATTGTTTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGACTAAACTGTGTTAACTTATAACATAAGAATTATTGTTTTAAA  50

seq1  CTCTTAATGAACTTATAGAACTACTGACAGATAATAGATGCTTATTAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAATGAACTTATAGAACTACTGACAGATAATAGATGCTTATTAGTC  100

seq1  TTAATGAAAACTTGTAAACATTCCTGCTGAAACTTCTTATTCAATTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAAAACTTGTAAACATTCCTGCTGAAACTTCTTATTCAATTTATG  150

seq1  ATGAACTTTTGGAATGTAAAGACATTTGGAAAACCATGTGATTTATTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTTTGGAATGTAAAGACATTTGGAAAACCATGTGATTTATTCTC  200

seq1  TGAAAATTCTTTAAGTACTAAGAAGAGAGCTCCTGGCTGACTTGCCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTCTTTAAGTACTAAGAAGAGAGCTCCTGGCTGACTTGCCAGAC  250

seq1  TAAAGAGCTCTAGCAATTTATCCTTTATTTAATTCTCCACTTCTAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCTCTAGCAATTTATCCTTTATTTAATTCTCCACTTCTAAAAAG  300

seq1  CACTTGTTAATTCGTCAGACTTTAGTGCTTGTTTAAGCACAGAATAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTAATTCGTCAGACTTTAGTGCTTGTTTAAGCACAGAATAATAA  350

seq1  GAGTTAAGTTTTCCAGTGCTTATTCTAGCATGTAGAATTAAAAAGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAGTTTTCCAGTGCTTATTCTAGCATGTAGAATTAAAAAGGAAAA  400

seq1  GTTAAGTTTCCTACAAGCCCAGAGATCATTAGTCTGTTAGCTTTCATCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGTTTCCTACAAGCCCAGAGATCATTAGTCTGTTAGCTTTCATCCA  450

seq1  ACACTGTGTCCCACTTCAACATGTTCCCCTAAGGGACAGGCCCCCAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTGTCCCACTTCAACATGTTCCCCTAAGGGACAGGCCCCCAGCAA  500

seq1  CTGTCCAATGTTCTCTTGCCTCCGTTTTC-TTGTTTACC-ACACTGAGAT  548
      ||||||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  CTGTCCAATGTTCTCTTGCCTCCGTTTTCTTTGTTTACCAACACTGAGAT  550

seq1  TATATCCACATCAATAAGGTCCTTTCCAGTCCTAAAACCC-TACAGGAAT  597
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATATCCACATCAATAAGGTCCTTTCCAGTCCTAAAACCCTTACAGGAAT  600

seq1  AGTGGTTAATCATCTGCTGACCTGAGCTTTGCCTTAACATAACTGGCCTT  647
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTT-ATCATCTGCTGACCTGAGCTTTGCCTTAACATAACTGGCCTT  649

seq1  ACAAGTCAGTGAGACGTTAAGCCCA-TTGTATCT-CTCACTAAGTG-TAG  694
      || ||||||||||||||| |||||| |||||||| ||||||||||| |||
seq2  AC-AGTCAGTGAGACGTTTAGCCCATTTGTATCTCCTCACTAAGTGTTAG  698

seq1  CAGAAAGGCTCATAAGAGCCTTTGGTTTCTCTCCTGGGCATA-TATCCAG  743
      |||||  |||||||||||||||| ||||||   || |||||| ||| |||
seq2  CAGAA--GCTCATAAGAGCCTTT-GTTTCTTCTCTTGGCATATTATTCAG  745

seq1  AAGC-TATTCCAACTGGTAAG-ATGGAAAGATGCTCCAC-TATGTT--CA  788
      |||| |||||| ||||||||| || |||||||||||||| ||||||   |
seq2  AAGCTTATTCC-ACTGGTAAGTATTGAAAGATGCTCCACTTATGTTTCAA  794

seq1  TAGCAGCCTTATTTATAATAGCCAGAAGCTGG  820
      | ||   |||| ||||||||| ||||||||||
seq2  TGGCTAGCTTA-TTATAATAG-CAGAAGCTGG  824

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information