BAC Information

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BAC

Clone NameB6Ng01-269D02
Chromosome1 (Build37)
Map Location 32,934,437 - 32,935,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041238, Khdrbs2, EG408191
Downstream geneEG633498, LOC213711, LOC100040828, EG666108, Prim2, 1700001G17Rik, Rab23, Bag2, Zfp451, OTTMUSG00000022109, B230209C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269D02.bB6Ng01-269D02.g
ACCGA071855GA071856
length1,0611,147
definitionB6Ng01-269D02.b B6Ng01-269D02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaagacgtttaggatgaaagacttaagtgtctaacttactaa
agtagagggtttatgaacaccaaatccatcaataagagcaaatacaagtg
agaagttcacaggaaagaactgtagcacaaactatgtaaaggcattaagg
attactgaatgaaaaagtgtaagcaagcttccagacatggtgggaaaata
gggactaaatataacttcataggcgaaaactctgaaaacaagggaggttg
ggggcatagtttatacagcaatggtttctaagttccatctagtgtttggc
tgtgggtgtctgcatctgctcctaccagttgcaacatgaagcctctctga
tgacaattctgtgaaggatccaggtctctgagctttccagtctctgattc
ctggacctccaggcagtgtcaggcacaagctccatctcatggtatggacc
tcaagctggaaccatcattagttggccctgtcttcaagttctgtgtcacc
ttttaccccagcacatcatgcagacaggacaaattgtaggcaaaaggttt
tgtgcctgggttagtgttaggatccctccactggaagccttacctggtta
ctgaagatggctggttcaggttctaaagcccccattactgagaatttatg
ccagagtccccttaggttccaaggagattccactgcactaagtttctacc
tcacccccaagcccttcccaatttcagccatctctccaagttttctcccc
tctatccttctctgctacctgacccctcctgttcccatccccacccataa
ccaattcacccttgaaaactattcatttccccttcctagggagctccttg
tattctcccttgagtactccttgttacttagcttctctgggtctgtggat
agtagcatgattatcctgtacttaggaagcttataagtaagtacacttat
aaactttacttacccactcataagtgagtacataccatgttgtctttctg
ggtctcggttacttcattcaaggattgttttccagttcatacatttgcca
gcaactcatga

gaattcaaggccaatacctaaacatgataaaagcaatctacagcaatcca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggtgttatcatgtagagaatgcgaatcgatccatactatctcc
ttgtactaagtcaaatctaagtgatcagactcacataaacagagacactg
aactatagagagaagtggggaaaggctgagattggcacaggtaaaaatct
gaacgacgcaatgcttggccgtagaatcggagaatgaacaaattggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32934437_32935206
seq2: B6Ng01-269D02.b_46_815

seq1  GAATTCAGTAAGACGTTTAGGATGAAAGACTTAAGTGTCTAACTTACTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAGACGTTTAGGATGAAAGACTTAAGTGTCTAACTTACTAA  50

seq1  AGTAGAGGGTTTATGAACACCAAATCCATCAATAAGAGCAAATACAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGGGTTTATGAACACCAAATCCATCAATAAGAGCAAATACAAGTG  100

seq1  AGAAGTTCACAGGAAAGAACTGTAGCACAAACTATGTAAAGGCATTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTCACAGGAAAGAACTGTAGCACAAACTATGTAAAGGCATTAAGG  150

seq1  ATTACTGAATGAAAAAGTGTAAGCAAGCTTCCAGACATGGTGGGAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGAATGAAAAAGTGTAAGCAAGCTTCCAGACATGGTGGGAAAATA  200

seq1  GGGACTAAATATAACTTCATAGGCGAAAACTCTGAAAACAAGGGAGGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTAAATATAACTTCATAGGCGAAAACTCTGAAAACAAGGGAGGTTG  250

seq1  GGGGCATAGTTTATACAGCAATGGTTTCTAAGTTCCATCTAGTGTTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATAGTTTATACAGCAATGGTTTCTAAGTTCCATCTAGTGTTTGGC  300

seq1  TGTGGGTGTCTGCATCTGCTCCTACCAGTTGCAACATGAAGCCTCTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGTCTGCATCTGCTCCTACCAGTTGCAACATGAAGCCTCTCTGA  350

seq1  TGACAATTCTGTGAAGGATCCAGGTCTCTGAGCTTTCCAGTCTCTGATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATTCTGTGAAGGATCCAGGTCTCTGAGCTTTCCAGTCTCTGATTC  400

seq1  CTGGACCTCCAGGCAGTGTCAGGCACAAGCTCCATCTCATGGTATGGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCTCCAGGCAGTGTCAGGCACAAGCTCCATCTCATGGTATGGACC  450

seq1  TCAAGCTGGAACCATCATTAGTTGGCCCTGTCTTCAAGTTCTGTGTCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCTGGAACCATCATTAGTTGGCCCTGTCTTCAAGTTCTGTGTCACC  500

seq1  TTTTACCCCAGCACATCATGCAGACAGGACAAATTGTAGGCAAAAGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCCCAGCACATCATGCAGACAGGACAAATTGTAGGCAAAAGGTTT  550

seq1  TGTGCCTGGGTTAGTGTTAGGATCCCTCCACTGGAAGCCTTACCTGGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGGGTTAGTGTTAGGATCCCTCCACTGGAAGCCTTACCTGGTTA  600

seq1  CTGAAGATGGCTGGTTCAGGTTCTAAAGCCCCCATTACTGAGAATTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATGGCTGGTTCAGGTTCTAAAGCCCCCATTACTGAGAATTTATG  650

seq1  CCAGAGTCCCCTTAGGTTCCAAGGAGATTCCACTGCACTAAGTTTCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTCCCCTTAGGTTCCAAGGAGATTCCACTGCACTAAGTTTCTACC  700

seq1  TCACCCCCAAGCCCTTCCCAATTTCAGCCATCTCTCCAAGTTTTCTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCCAAGCCCTTCCCAATTTCAGCCATCTCTCCAAGTTTTCTCCCC  750

seq1  TCTATCCTTCTCTGCTACCT  770
      ||||||||||||||||||||
seq2  TCTATCCTTCTCTGCTACCT  770


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