BAC Information

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BAC

Clone NameB6Ng01-269G21
Chromosome1 (Build37)
Map Location 150,257,209 - 150,371,642
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269G21.bB6Ng01-269G21.g
ACCGA072031GA072032
length9961,141
definitionB6Ng01-269G21.b B6Ng01-269G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,371,051 - 150,371,642)(150,257,209 - 150,258,374)
sequence
gaattcctctcaagaaacattaaattcatgatggatatgatccagcagat
gttctactttgccctagtagaaatcgccacaatggagattcttaaagtgt
ccattcacaagcttacgcatgtttcaagtttaccagaaagagagggtaac
aaagaaaatttgtttgtaacaaagaaaattttcctttataaggagtgaag
actatgcatatttgtaaatgtaagaacaaatatttataatgtagttaagg
attatgacaattttcaggttgtaggttctcctgctagattcatgactgca
ttagccctggctagtttagactaggtttccagtaccagttatgatttatt
tcatgttgagtgtgcgttaatgcaaattagagaactgttgtttattctca
aggtatgcatatcattaatttaccccgagggttgtgatgccatgcttatt
attgtaatttataggcatcccatcaaggtagggctgttgggtgtttttat
ccattggaagcctgtttggaagtttctggtaccatgaaagctagtcgtca
tcagaggaggcatccatgatagttcctttcaggggcctctgggccctttt
tctgaaatgcatggtgtcttcagcaagagggactgaaacttttactctag
taggccatcaaggctaataccaactacctccaatgatttagatgtctctt
ccacatccctgacacttcaagttgactaacaattcaaatgaagtttctga
tattttgtgctatagaacttttttttttaaagatgtttttgggttcttga
attatgcattgtgcaattatatcttctagttagggcagaaagtacatcca
tgaaatcttattgtaatgtaactgtttaaacatgaactgaacaaacataa
cagtagacatgataaggtagactgggaaaatctcagagacatcaactcta
tgcaaagacgatgggtactaagtaatgcagagaatgggagagtagt

gaattctttaactctataaaggataccaggtaattttacctgattcctta
tatctcttcagagccaatgcttgatattaatataggatattttttatttg
ttttcttagaagagataacagatttattaagaaaaggggaagataaaaaa
ctctcaagagtgggggagtttcgaagtgaggatactcagtattagatatc
ttgcaaaaataaactagatgctgtagtaccaaagatgtcaaatgcatatg
agcataggattaaacggaaagggttggttagtttactcatattttcattt
aaattcctaacaaagtaagaaacgacttcttttttatttttttcatgaaa
gtaaaagtataattacattacttccatcttttcattttctatctctaata
cctcctttgtatactcttttgactctgaagaaataggtctctttttgaat
agttgttattcttacagatgagcatacacacacaaatacacacagacaca
tacctaattaaaccctgttgtcaatcataaaattatatacatatatatat
aaagtaacattaaatagactgaagagtttgaagatttctatgaaatcttc
gtgctcaagtatcctaagtaaggaaagaaaggagtattaattagtaaata
agatgaaatataaatgttaaaaatgttatagcaatattttgggaatagca
aagtgagtgatgtttgaagggcaaaaaggataatgatgttgaagtctgga
aaacaaaagcatcccgaatttcacaactttacttatgactttcaagtttt
acatacatttgtcattagtcaacaatatcaccctatgtaattatggggtt
ctgcggaggtcagaagcggcaattccatgtcatggaattactgtgtatta
gactatgccaaacaacaacgataaataaataaattgtaactttagatctt
gtttaattttgtgatgtaattacacatttactcttaattacattggattc
tgtgacctattgttaatttgagttcattgacacgatttaaatcctagtat
tttcagtggaaggtggattaaccaactgtatcctttatcattagcagtat
aggatcatgtttccccctcatcatatttttttgttttggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150371051_150371642
seq2: B6Ng01-269G21.b_46_637 (reverse)

seq1  CCAGAGGCCCCTGAAAGGAACTATCATGGATGCCTCCTCTGATGACGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGGCCCCTGAAAGGAACTATCATGGATGCCTCCTCTGATGACGACT  50

seq1  AGCTTTCATGGTACCAGAAACTTCCAAACAGGCTTCCAATGGATAAAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCATGGTACCAGAAACTTCCAAACAGGCTTCCAATGGATAAAAAC  100

seq1  ACCCAACAGCCCTACCTTGATGGGATGCCTATAAATTACAATAATAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACAGCCCTACCTTGATGGGATGCCTATAAATTACAATAATAAGCA  150

seq1  TGGCATCACAACCCTCGGGGTAAATTAATGATATGCATACCTTGAGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATCACAACCCTCGGGGTAAATTAATGATATGCATACCTTGAGAATA  200

seq1  AACAACAGTTCTCTAATTTGCATTAACGCACACTCAACATGAAATAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAGTTCTCTAATTTGCATTAACGCACACTCAACATGAAATAAATC  250

seq1  ATAACTGGTACTGGAAACCTAGTCTAAACTAGCCAGGGCTAATGCAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGGTACTGGAAACCTAGTCTAAACTAGCCAGGGCTAATGCAGTCA  300

seq1  TGAATCTAGCAGGAGAACCTACAACCTGAAAATTGTCATAATCCTTAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTAGCAGGAGAACCTACAACCTGAAAATTGTCATAATCCTTAACT  350

seq1  ACATTATAAATATTTGTTCTTACATTTACAAATATGCATAGTCTTCACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATAAATATTTGTTCTTACATTTACAAATATGCATAGTCTTCACTC  400

seq1  CTTATAAAGGAAAATTTTCTTTGTTACAAACAAATTTTCTTTGTTACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAGGAAAATTTTCTTTGTTACAAACAAATTTTCTTTGTTACCCT  450

seq1  CTCTTTCTGGTAAACTTGAAACATGCGTAAGCTTGTGAATGGACACTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTGGTAAACTTGAAACATGCGTAAGCTTGTGAATGGACACTTTA  500

seq1  AGAATCTCCATTGTGGCGATTTCTACTAGGGCAAAGTAGAACATCTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCCATTGTGGCGATTTCTACTAGGGCAAAGTAGAACATCTGCTG  550

seq1  GATCATATCCATCATGAATTTAATGTTTCTTGAGAGGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATATCCATCATGAATTTAATGTTTCTTGAGAGGAATTC  592


seq1: chr1_150257209_150258374
seq2: B6Ng01-269G21.g_65_1205

seq1  GAATTCTTTAACTCTATAAAGGATACCAGGTAATTTTACCTGATTCCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAACTCTATAAAGGATACCAGGTAATTTTACCTGATTCCTTA  50

seq1  TATCTCTTCAGAGCCAATGCTTGATATTAATATAGGATATTTTTTATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTCAGAGCCAATGCTTGATATTAATATAGGATATTTTTTATTTG  100

seq1  TTTTCTTAGAAGAGATAACAGATTTATTAAGAAAAGGGGAAGATAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAGAAGAGATAACAGATTTATTAAGAAAAGGGGAAGATAAAAAA  150

seq1  CTCTCAAGAGTGGGGGAGTTTCGAAGTGAGGATACTCAGTATTAGATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGAGTGGGGGAGTTTCGAAGTGAGGATACTCAGTATTAGATATC  200

seq1  TTGCAAAAATAAACTAGATGCTGTAGTACCAAAGATGTCAAATGCATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAAATAAACTAGATGCTGTAGTACCAAAGATGTCAAATGCATATG  250

seq1  AGCATAGGATTAAACGGAAAGGGTTGGTTAGTTTACTCATATTTTCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGGATTAAACGGAAAGGGTTGGTTAGTTTACTCATATTTTCATTT  300

seq1  AAATTCCTAACAAAGTAAGAAACGACTTCTTTTTTATTTTTTTCATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTAACAAAGTAAGAAACGACTTCTTTTTTATTTTTTTCATGAAA  350

seq1  GTAAAAGTATAATTACATTACTTCCATCTTTTCATTTTCTATCTCTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTATAATTACATTACTTCCATCTTTTCATTTTCTATCTCTAATA  400

seq1  CCTCCTTTGTATACTCTTTTGACTCTGAAGAAATAGGTCTCTTTTTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTTGTATACTCTTTTGACTCTGAAGAAATAGGTCTCTTTTTGAAT  450

seq1  AGTTGTTATTCTTACAGATGAGCATACACACACAAATACACACAGACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTATTCTTACAGATGAGCATACACACACAAATACACACAGACACA  500

seq1  TACCTAATTAAACCCTGTTGTCAATCATAAAATTATATACATATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAATTAAACCCTGTTGTCAATCATAAAATTATATACATATATATAT  550

seq1  AAAGTAACATTAAATAGACTGAAGAGTTTGAAGATTTCTATGAAATCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACATTAAATAGACTGAAGAGTTTGAAGATTTCTATGAAATCTTC  600

seq1  GTGCTCAAGTATCCTAAGTAAGGAAAGAAAGGAGTATTAATTAGTAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCAAGTATCCTAAGTAAGGAAAGAAAGGAGTATTAATTAGTAAATA  650

seq1  AGATGAAATATAAATGTTAAAAATGTTATAGCAATATTTTGGGAATAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAAATATAAATGTTAAAAATGTTATAGCAATATTTTGGGAATAGCA  700

seq1  AAGTGAGTGATGTTTGAAGGGCAAAAAGGATAATGATGTTGAAGTCTGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGTGATGTTTGAAGGGCAAAAAGGATAATGATGTTGAAGTCTGGA  750

seq1  AAACAAAAGCATCCCGAATTTCACAACTTTACTTATGACTTTCAAGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAGCATCCCGAATTTCACAACTTTACTTATGACTTTCAAGTTTT  800

seq1  ACATACATTTGTCATTAGTCAACAATATCACCCTATGTAATTATGGGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATTTGTCATTAGTCAACAATATCACCCTATGTAATTATGGGGTT  850

seq1  CTGCGGAGGTCAGAAGCGGCAATTCCATGTCATGGAATTACTGTGTATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGGAGGTCAGAAGCGGCAATTCCATGTCATGGAATTACTGTGTATTA  900

seq1  GACTATGCCAAACAACAACGATAAATAAATAAAATTGTAACTTTAGATCT  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GACTATGCCAAACAACAACGATAAATAAAT-AAATTGTAACTTTAGATCT  949

seq1  TGTTTAATTTTGTGATGTAAATTACACATTTACTCTTAATTACATTGGAT  1000
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGTTTAATTTTGTGATGT-AATTACACATTTACTCTTAATTACATTGGAT  998

seq1  TCTGTGGACCTAATTGTTAATTGAAGTTCATTGAACACGATTTAAAATCC  1050
      ||||| ||||| ||||||||||  ||||||||| ||||||||||||   |
seq2  TCTGT-GACCT-ATTGTTAATTTGAGTTCATTG-ACACGATTTAAA--TC  1043

seq1  CTAGTA-TTTCAGT-GAAGTTGAATTTACCAACTGTTAATCCTTAATCAT  1098
      |||||| ||||||| |||| || ||| |||||||||  |||||| |||||
seq2  CTAGTATTTTCAGTGGAAGGTGGATTAACCAACTGT--ATCCTTTATCAT  1091

seq1  TAAGGCAGTATAAGGAATCATGTTTTCCCCTCTTTCTTTTTTTTTTTTGT  1148
      ||  ||||||||  | ||||||||| |||||| |  | |||         
seq2  TA--GCAGTATA--GGATCATGTTTCCCCCTCATCATATTT---------  1128

seq1  TTTTGTTTTGTTTTGGTT  1166
           |||||||||||||
seq2  -----TTTTGTTTTGGTT  1141


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