BAC Information

Click to search

BAC

Clone NameB6Ng01-269L23
Chromosome1 (Build37)
Map Location 118,717,683 - 118,718,880
singlet/doubletsinglet
Overlap genenone
Upstream geneCntnap5a
Downstream geneB020011L13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269L23.bB6Ng01-269L23.g
ACCGA072261GA072262
length1,181940
definitionB6Ng01-269L23.b B6Ng01-269L23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaggaaaaaattcacaagtgttaaagcataactcaattctac
acataaatatacaaacattacaaagtggcatttgggtgaatgaagtgtgt
tacctgatggatatatcacataatatgagattaagcagggcttcagtgct
gtatgaacaaatgagagagtgtaacagagaaaacgatactgaatgtcatc
aaggtgaaggatatttttctcaaaatttatggcagttccctcaaaatcta
ctcagagaaaagttcaatgatgtagatcaacataagaatgagtttatgga
agcaatgaaacatggaagatatgatatgagaggtaactgtaaaaactcca
aaacaataaatgatattaatatagattatgttaggaacccttttttaata
tatttccaaagaagtcaatatggagagatattataccaaggtagtgtctt
attacatgattctacttgtaaaataaatccaagtgaaaatcagataagca
gatacattccagaatatcattataggaaacatagaaaaatggctatctct
aatcactgtttccagtcttctttgcaacagcaaaccatagagaaacttta
taaaaatgaaaagaagaatgtcattttaagtgaatatttaattcatagct
ggtatactagaacatgtgttaatggagattccaagagatatatgtgtgat
atatacagggatgcctcaaatgaatcattaaactttcagagagaccagaa
agcatataaatgtagtacatatggaaaatcctttatcctgtactcaaatc
ttcaatcttactacagaactcgcacccaagagataccttacaaacataat
gaatgtggaaaattctttactggttcctcaagtcttaaagtttgccataa
aatctttactggagaaagacttcataagtctaataagtgtggaaaatctt
ttacacagtccacaaaacttcaagttaatcaaagaatctgtataggaaag
aagccttacaaatgtaatgaatgtgggaaatattttaccagatcttcaaa
ccttctaggtcacacaggatcataaagagagaggctacaaatgtaataaa
tgtggcaaatatttaccaattcctcaatctaaggtcctactatcgataga
agaaaactaccaaatgtaatgaatgtgcaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaagggctg
ttcttaatatttaatacatgctaaatagcagttatttatatgtttttctg
aacttaagcttccttggatcattattttctttgtcacatccatgtataga
agaatgagagagaatatgtctgatgctatagacagtcttacttcatcagc
ttcagtgtacttttatacatgacaaatgctaattaacatagtgtgactat
acagtgtatgatcttagtccacatggctaatgaatgcagggctttggaaa
gcactcttcattgctactggatcagcaaataattaacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_118717683_118718880
seq2: B6Ng01-269L23.b_48_1228

seq1  GAATTCTCTAGGAAAAAATTCACAAGTGTTAAAGCATAACTCAATTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGGAAAAAATTCACAAGTGTTAAAGCATAACTCAATTCTAC  50

seq1  ACATAAATATACAAACATTACAAAGTGGCATTTGGGTGAATGAAGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATATACAAACATTACAAAGTGGCATTTGGGTGAATGAAGTGTGT  100

seq1  TACCTGATGGATATATCACATAATATGAGATTAAGCAGGGCTTCAGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGATGGATATATCACATAATATGAGATTAAGCAGGGCTTCAGTGCT  150

seq1  GTATGAACAAATGAGAGAGTGTAACAGAGAAAACGATACTGAATGTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAACAAATGAGAGAGTGTAACAGAGAAAACGATACTGAATGTCATC  200

seq1  AAGGTGAAGGATATTTTTCTCAAAATTTATGGCAGTTCCCTCAAAATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAAGGATATTTTTCTCAAAATTTATGGCAGTTCCCTCAAAATCTA  250

seq1  CTCAGAGAAAAGTTCAATGATGTAGATCAACATAAGAATGAGTTTATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGAAAAGTTCAATGATGTAGATCAACATAAGAATGAGTTTATGGA  300

seq1  AGCAATGAAACATGGAAGATATGATATGAGAGGTAACTGTAAAAACTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGAAACATGGAAGATATGATATGAGAGGTAACTGTAAAAACTCCA  350

seq1  AAACAATAAATGATATTAATATAGATTATGTTAGGAACCCTTTTTTAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATAAATGATATTAATATAGATTATGTTAGGAACCCTTTTTTAATA  400

seq1  TATTTCCAAAGAAGTCAATATGGAGAGATATTATACCAAGGTAGTGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCAAAGAAGTCAATATGGAGAGATATTATACCAAGGTAGTGTCTT  450

seq1  ATTACATGATTCTACTTGTAAAATAAATCCAAGTGAAAATCAGATAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGATTCTACTTGTAAAATAAATCCAAGTGAAAATCAGATAAGCA  500

seq1  GATACATTCCAGAATATCATTATAGGAAACATAGAAAAATGGCTATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATTCCAGAATATCATTATAGGAAACATAGAAAAATGGCTATCTCT  550

seq1  AATCACTGTTTCCAGTCTTCTTTGCAACAGCAAACCATAGAGAAACTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGTTTCCAGTCTTCTTTGCAACAGCAAACCATAGAGAAACTTTA  600

seq1  TAAAAATGAAAAGAAGAATGTCATTTTAAGTGAATATTTAATTCATAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGAAAAGAAGAATGTCATTTTAAGTGAATATTTAATTCATAGCT  650

seq1  GGTATACTAGAACATGTGTTAATGGAGATTCCAAGAGATATATGTGTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACTAGAACATGTGTTAATGGAGATTCCAAGAGATATATGTGTGAT  700

seq1  ATATACAGGGATGCCTCAAATGAATCATTAAACTTTCAGAGAGACCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGGGATGCCTCAAATGAATCATTAAACTTTCAGAGAGACCAGAA  750

seq1  AGCATATAAATGTAGTACATATGGAAAATCCTTTATCCTGTACTCAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATAAATGTAGTACATATGGAAAATCCTTTATCCTGTACTCAAATC  800

seq1  TTCAATCTTACTACAGAACTCGCACCCAAGAGATACCTTACAAACATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCTTACTACAGAACTCGCACCCAAGAGATACCTTACAAACATAAT  850

seq1  GAATGTGGAAAATTCTTTACTGGTTCCTCAAGTCTTAAAGTTTGCCATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGGAAAATTCTTTACTGGTTCCTCAAGTCTTAAAGTTTGCCATAA  900

seq1  AATCTTTACTGGAGAAAGACTTCATAAGTCTAATAAGTGTGGAAAATCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTACTGGAGAAAGACTTCATAAGTCTAATAAGTGTGGAAAATCTT  950

seq1  TTACACAGTCCACAAAACTTCAAGTTAATCAAAGAATCTGTATAGGAAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAGTCCACAAAACTTCAAGTTAATCAAAGAATCTGTATAGGAAAG  1000

seq1  AAGCCTTACAAATGTAATGAATGTGGGAAATATTTTACCAGATCTTCAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTACAAATGTAATGAATGTGGGAAATATTTTACCAGATCTTCAAA  1050

seq1  CCTTCTAGTTCACAACAGAATCCATAAAGGAGAGAAGCCTTACAAATGTA  1100
      |||||||| |||| |||| || |||||| |||||| ||  ||||||||||
seq2  CCTTCTAGGTCAC-ACAGGAT-CATAAA-GAGAGAGGC--TACAAATGTA  1095

seq1  ATAAATGTGGCAAATATTTTACACAATCCTCAAATCTTAAAGTTCACTAC  1150
      |||||||||||||||| |||||  | ||||| |||||  ||| || ||||
seq2  ATAAATGTGGCAAATA-TTTACCAATTCCTC-AATCT--AAGGTC-CTAC  1140

seq1  AGAAACCATACAGGAGAAAAACCTTACAAATGTAATGAATGTGGCAAA  1198
         | | ||  || ||||||  ||  |||||||||||||||| |||||
seq2  --TATCGAT--AGAAGAAAA--CTACCAAATGTAATGAATGT-GCAAA  1181