BAC Information

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BAC

Clone NameB6Ng01-270C03
Chromosome1 (Build37)
Map Location 186,122,937 - 186,124,136
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666649, 1700056E22Rik, Dusp10
Downstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1, Iars2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270C03.bB6Ng01-270C03.g
ACCGA072554GA072555
length9541,183
definitionB6Ng01-270C03.b B6Ng01-270C03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggagttatttgatt
ttctggggtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacgtgtcttttgccttacagaagctttgcagttttat
gaggtcccatttgtcaattctcgatcttacaacacaagccattgctgttc
tattcaggaatttttcccctgtgccaatatcttcgaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataggagtggatcaatttaca
ttcttctacatgataaccaccaattgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ccacttgtctgtcactataccagtaccatgccatttttatcacaattgct
ctgtagtacagttttaggtcaggcatgatgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgcagattgccctttctaattcttgcagattgctctttctttctttc
tttcttcctttctttctttctttctttctttctttctttctttctttctt
tctttctttttttttttttttttggtttttcgagacagggtttctctgta
tagccctggctgtcctggaactcactttgtagaccaggctggcctcgaac
tcagaaatccacctgcctctgcctcccagtgctgggattaaaggcgtgca
ccac

gaattctggaggaaggcaatgtgccttcaaatagattatcatgaatctgg
ggctagggatttggggctcagggatagaacatttgcctagtaagtcctgg
gattaatccctagctttaaagaagaagatagaaacagtaaaagaagtaag
ctttttttatttttctgttgggtatcacaggttgcatgtgatattagctt
gttgtgagtagtaataattccatgtttttgtgttactagcatccatatta
gtttccattcattgtttacctaatggctgctgaactgaattactctatgg
cagccctaagtatattatagattttctcactaaaccattccacgccctca
tagcatcatcatcagctatacacaactgcagtaacaattgcaggaccctt
cgagcattcttgcaaggctatgaataacatctttctttcaaccttcaatt
atacacttacctcactgaaactattattatcttacaaaattttgggttaa
atatttgctgcattctgaaagaagctccctcccccaactccggttcactc
gggtacatcttcacatttgaaaaaccctaatcaaccatgaacaatctcaa
ggcagtatgcacacagtacagaacgatacctagtgaaagagcctggactc
tccagtttgtcatctagactcagatctaacatctgaggggcccggaccat
gaggacacacgtcatctctatgtgcacctgaaagaagaggacaaggaagc
atgtgaagaacaaaggagcaagccagggtagcctccacaccggtgccttg
catccagttagctccccccgaagcttattacttctttcttcacctttccc
atcagaagggccttcccgtctttaccactcagtgtttcagccacaaggat
acccaggatatgttcctcagtttctggtctctaaaaaccatacagatagc
ctttcgggacttcattgttgggcctgtttgtctatgctgctaagctttgg
tttctcagagaacctacctgagatcagccagggcgatgtagcagtgtcat
gcagacacagtggtgctttgatggagtcagagaccagctgaggcctctgc
ctgctattcaacacctgccttcagtgtcctactcgaaccttacacacatg
cacctaagcttttaatgctcagagagtccgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186122937_186124136
seq2: B6Ng01-270C03.g_63_1245

seq1  GAATTCTGGAGGAAGGCAATGTGCCTTCAAATAGATTATCATGAATCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGGAAGGCAATGTGCCTTCAAATAGATTATCATGAATCTGG  50

seq1  GGCTAGGGATTTGGGGCTCAGGGATAGAACATTTGCCTAGTAAGTCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGGATTTGGGGCTCAGGGATAGAACATTTGCCTAGTAAGTCCTGG  100

seq1  GATTAATCCCTAGCTTTAAAGAAGAAGATAGAAACAGTAAAAGAAGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATCCCTAGCTTTAAAGAAGAAGATAGAAACAGTAAAAGAAGTAAG  150

seq1  CTTTTTTTATTTTTCTGTTGGGTATCACAGGTTGCATGTGATATTAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTATTTTTCTGTTGGGTATCACAGGTTGCATGTGATATTAGCTT  200

seq1  GTTGTGAGTAGTAATAATTCCATGTTTTTGTGTTACTAGCATCCATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAGTAGTAATAATTCCATGTTTTTGTGTTACTAGCATCCATATTA  250

seq1  GTTTCCATTCATTGTTTACCTAATGGCTGCTGAACTGAATTACTCTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATTCATTGTTTACCTAATGGCTGCTGAACTGAATTACTCTATGG  300

seq1  CAGCCCTAAGTATATTATAGATTTTCTCACTAAACCATTCCACGCCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTAAGTATATTATAGATTTTCTCACTAAACCATTCCACGCCCTCA  350

seq1  TAGCATCATCATCAGCTATACACAACTGCAGTAACAATTGCAGGACCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCATCATCAGCTATACACAACTGCAGTAACAATTGCAGGACCCTT  400

seq1  CGAGCATTCTTGCAAGGCTATGAATAACATCTTTCTTTCAACCTTCAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCATTCTTGCAAGGCTATGAATAACATCTTTCTTTCAACCTTCAATT  450

seq1  ATACACTTACCTCACTGAAACTATTATTATCTTACAAAATTTTGGGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTTACCTCACTGAAACTATTATTATCTTACAAAATTTTGGGTTAA  500

seq1  ATATTTGCTGCATTCTGAAAGAAGCTCCCTCCCCCAACTCCGGTTCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGCTGCATTCTGAAAGAAGCTCCCTCCCCCAACTCCGGTTCACTC  550

seq1  GGGTACATCTTCACATTTGAAAAACCCTAATCAACCATGAACAATCTCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACATCTTCACATTTGAAAAACCCTAATCAACCATGAACAATCTCAA  600

seq1  GGCAGTATGCACACAGTACAGAACGATACCTAGTGAAAGAGCCTGGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTATGCACACAGTACAGAACGATACCTAGTGAAAGAGCCTGGACTC  650

seq1  TCCAGTTTGTCATCTAGACTCAGATCTAACATCTGAGGGGCCCGGACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTGTCATCTAGACTCAGATCTAACATCTGAGGGGCCCGGACCAT  700

seq1  GAGGACACACGTCATCTCTATGTGCACCTGAAAGAAGAGGACAAGGAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACACACGTCATCTCTATGTGCACCTGAAAGAAGAGGACAAGGAAGC  750

seq1  ATGTGAAGAACAAAGGAGCAAGCCAGGGTAGCCTCCACACCGGTGCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAGAACAAAGGAGCAAGCCAGGGTAGCCTCCACACCGGTGCCTTG  800

seq1  CATCCAGTTAGCTCCCCCCGAAGCTTATTACTTCTTTCTTCACCTTTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTTAGCTCCCCCCGAAGCTTATTACTTCTTTCTTCACCTTTCCC  850

seq1  ATCAGAAGGGCCTTCCCGTCTTTACCACTCAGTGTTTCAGCCACAAGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAGGGCCTTCCCGTCTTTACCACTCAGTGTTTCAGCCACAAGGAT  900

seq1  ACCCAGGATATGTTCCTCAGTTTTCTGGTCTCTAAAAACCATACAGATAG  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACCCAGGATATGTTCCTCAG-TTTCTGGTCTCTAAAAACCATACAGATAG  949

seq1  CCTTTCGGGACTTCATTGTTGGGCCTTGTTTGTCTATGCTTGGCTAAGCT  1000
      ||||||||||||||||||||||||| ||||||||||||||  ||||||| 
seq2  CCTTTCGGGACTTCATTGTTGGGCC-TGTTTGTCTATGCT--GCTAAGC-  995

seq1  TTTGGTTTCTCAGAGAAACCTACCTGAGATCAAGCCAGGGCGATGTAGCA  1050
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  TTTGGTTTCTCAGAG-AACCTACCTGAGATC-AGCCAGGGCGATGTAGCA  1043

seq1  GTGTCATGCCAAGACACAGT-GTGCTTGGTTGAAGTCAGAAGAACCCAGC  1099
      |||||||||  ||||||||| |||||| | || |||||| |||  |||||
seq2  GTGTCATGC--AGACACAGTGGTGCTTTGATGGAGTCAG-AGA--CCAGC  1088

seq1  TGAGGGCTCTGCTGCCTATTCAAACACTGGCTTCAGTTTGTCCACTTTAA  1149
      ||||| ||||||   ||||||||   ||| ||||||  |||||      |
seq2  TGAGGCCTCTGCCTGCTATTCAACACCTGCCTTCAG--TGTCC-----TA  1131

seq1  CTCAGACATTACAACACATGCACCTAGGCTTTTAAATGC---AAGAGTCC  1196
      |||  || |||| ||||||||||||| |||||| |||||    |||||||
seq2  CTCGAACCTTAC-ACACATGCACCTAAGCTTTT-AATGCTCAGAGAGTCC  1179

seq1  GTGG  1200
      ||||
seq2  GTGG  1183


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