BAC Information

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BAC

Clone NameB6Ng01-270K04
Chromosome1 (Build37)1 (Build37)
Map Location 176,260,060 - 176,260,808175,068,193 - 175,069,314
singlet/doubletsingletsinglet
Overlap gene1810030J14Rik
Upstream geneDarc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419
Downstream geneOlfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2, Rgs7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270K04.bB6Ng01-270K04.g
ACCGA072925GA072926
length1,0961,124
definitionB6Ng01-270K04.b B6Ng01-270K04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(176,260,060 - 176,260,808)(175,068,193 - 175,069,314)
sequence
gaattcttgaaaataattttccattctgtagcttgtagatttctctgaat
gatgtcctttgcctgacagaagcttttcagttccattaggtcccatttac
taattgttgatcttgcctgttgttaccagtgctatcagttcaggaagtct
tctcctgtgccaatgagttcaaagcttttctccattttccttcctatcag
gttcagtgtatctggttttatgttgaggtctttgatccatttagagttga
gttttgttccaagtgataagactgtatctatttggataattttacatagt
cacagccagattaccaccacaatttgttaaagatgctaccattttccagt
atgtatttctggcttcttaataaaaaatccaggtgtatattggtttgttg
acttatgtctgagtcctcaattttattcccttgaccaacatgtgtccttt
gtcccaacaccatactatttttattactatagctctctacaatttgagat
tggaaatggtaatggcagtattatacagaagtattttagctatcctgggt
gatttgtattttcatatgaaactaaaaatcattctttcaagttctgtgaa
gaattgtgttggaattttaatggggactgtattgagtctgtagattggtt
ttgataggatgaatatttttactatattaatcctaccagttcatgaacac
ggaagatctttccatcttctgatatcttccgtttctttcagtgctttcaa
gtctttaacagacaagtttttcatttgcttagtttacccaagaattttta
cattatttgaggtgattaatacatcgttttaaaaaccatttattgttcag
ttaatattaaccttttattactttgtcttcttttgtgaaaacaagggtat
tgtcccagtgagtcctatataagagctacacagcagaggtttctccacag
agatgagggttgctgatctcccactactggatgtccaagagagcacatgg
agaagcttattgtgggcatcctgtttctctctgttctttcagagtgtagc
acaaacagttaggtcctgagccaagctggaagtttccacatcagaa
gaattcacaattgtattactaaaagggcaataaatattggaaggaaaatg
tagggtacaggatgtgtctttcaatgttttactgagtcatatattttgtg
ctgggatattgaaaacaaatctcagtcaactagatgaaatatggaaggaa
atttaatgtagaggaagaaaagatgagtgaaagaattaaggaatcaatgg
gaactcattccaaaatgtgaaacagcccaaaatgtgtcaggagatcatga
gaaagagatcataatattggaggtcataaaattgaggatgcacaaggctt
tgcacaactccagggatattttgagttagaaaagcttctgtgaagtgatg
attcaatcatatataaatttgcaatagatatataaaaaaatgcaacaaag
attggcagtttaggactcagaaagagaatgaggagatgatggttgttttt
gcagtaagagtgctttggatctggagctctggcggaagacaaagtcataa
cactgaattgttgagacgccagtagctaatctagcatggcagtcttaacc
cacatggtccagagccctggttttacccagcagggacccaagagtcagtt
ctcggaaagtgattatctgggggaaagcatggcttttcatggaaatctga
aaggattgcagttgtgagcctcttgaggcagcttgaaagaagagtgtcta
actcattatatggagaatcacaattgtctctttcaattctcaggatagag
ctcttaaacaaggaggtggtcctttcttctttgaataattcttgaaatac
atgtaagtatgaaatacagtgcacttactatgtcataagacattagtggc
agagttgtttacactggattaatctcagaggcttttcttattctgcatct
cactcataactgatagtgtcatgggtatctcaggaaatagtttaaagtga
taactgtccaatacattgccaaactttatctcatttgatgcatttagaag
tgggaaaatacctggaatctgactgaagatcactggatcatcgtaagtgg
ttattgtaataaaggtaaaggctaagactccatttctatttttttttaac
attgagaccataggtgtatttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176260060_176260808
seq2: B6Ng01-270K04.b_398_1138

seq1  TTTCTGGCTTCTTAATAAAAAAT-CAGGTGTATATTGATGTGTTGACTTA  49
      ||||||||||||||||||||||| ||||||||||||| | ||||||||||
seq2  TTTCTGGCTTCTTAATAAAAAATCCAGGTGTATATTGGTTTGTTGACTTA  50

seq1  TGTCTGAGTCATCAATTCTATTCCCTTGATCAACATGTGTCCTTTTTCCC  99
      |||||||||| |||||| ||||||||||| ||||||||||||||| ||||
seq2  TGTCTGAGTCCTCAATTTTATTCCCTTGACCAACATGTGTCCTTTGTCCC  100

seq1  AACACCATGCTGTTTTTATTTCTATAGCTCTCTATAATTTGAGACTGGGA  149
      |||||||| || |||||||| ||||||||||||| ||||||||| ||| |
seq2  AACACCATACTATTTTTATTACTATAGCTCTCTACAATTTGAGATTGGAA  150

seq1  ATGGTAATACCTCCAGCGGTATTATACAGAAGTATTTTAGCAATCCTGGG  199
      ||||||||       || ||||||||||||||||||||||| ||||||||
seq2  ATGGTAAT------GGCAGTATTATACAGAAGTATTTTAGCTATCCTGGG  194

seq1  TGATTTGTTTTTTCATATGAAGCTAAAAATCGTTCTTTCAAGTTCTGTGA  249
      |||||||| |||||||||||| ||||||||| ||||||||||||||||||
seq2  TGATTTGTATTTTCATATGAAACTAAAAATCATTCTTTCAAGTTCTGTGA  244

seq1  AGAATTGTGTTGGAATTTTA-----------ATTGAGTCTATAGACTGAT  288
      ||||||||||||||||||||           ||||||||| |||| || |
seq2  AGAATTGTGTTGGAATTTTAATGGGGACTGTATTGAGTCTGTAGATTGGT  294

seq1  TTTGATAGGATGAACATTTTTACTATACTAA-CCTACCAGTCCATGAGGA  337
      |||||||||||||| |||||||||||| ||| ||||||||| |||||  |
seq2  TTTGATAGGATGAATATTTTTACTATATTAATCCTACCAGTTCATGAACA  344

seq1  CAGAAGATCTTTCCATCTTTTGCTATCTTCTGTTCCTTTCAGTGCTTTGA  387
      | ||||||||||||||||| || ||||||| ||| ||||||||||||| |
seq2  CGGAAGATCTTTCCATCTTCTGATATCTTCCGTTTCTTTCAGTGCTTTCA  394

seq1  AGTCTTTATAATGCAAGTCTTCCATCTGTGTGGTTAGAGTTTATCTAAGA  437
      ||||||||  |  ||||| || ||| ||  |      |||||| | ||||
seq2  AGTCTTTAACAGACAAGTTTTTCATTTGCTT------AGTTTACCCAAGA  438

seq1  ATTTTTACATGATTTGAGGTGATTACCACATTAGTTTTAAAACCATGTAT  487
      |||||||||| ||||||||||||||  ||||   ||| |||||||| |||
seq2  ATTTTTACATTATTTGAGGTGATTAATACATCGTTTTAAAAACCATTTAT  488

seq1  TGTTCAGTTAATATTAACTTTTTATAACTTTGT-TTCTTTTGTGAAAACA  536
      |||||||||||||||||| |||||| ||||||| ||||||||||||||||
seq2  TGTTCAGTTAATATTAACCTTTTATTACTTTGTCTTCTTTTGTGAAAACA  538

seq1  AGGGTGTTGTCCCAATGAATGCAATATAAGAGCTACACAGCAAGAGGTTT  586
      ||||| |||||||| ||| | | |||||||||||||||||| ||||||||
seq2  AGGGTATTGTCCCAGTGAGTCCTATATAAGAGCTACACAGC-AGAGGTTT  587

seq1  CTCCACAGAGATGAGGGTTGCTGATCTCCCACTACTGGAATTGTCCAAGA  636
      |||||||||||||||||||||||||||||||||||||||  |||||||| 
seq2  CTCCACAGAGATGAGGGTTGCTGATCTCCCACTACTGGA--TGTCCAAG-  634

seq1  AGAGCACAATGGAGAAGCTTATTGTGGGCATCCTGTTTCTCTCTGTTCTT  686
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAC-ATGGAGAAGCTTATTGTGGGCATCCTGTTTCTCTCTGTTCTT  683

seq1  TCAGGAAGTGTAGCAGAAACAGGTAGGTCCTGAGCCAAGCTGGAAAGTTT  736
      ||||  ||||||||| |||||| ||||||||||||||||||||||   ||
seq2  TCAG--AGTGTAGCACAAACAGTTAGGTCCTGAGCCAAGCTGGAA--GTT  729

seq1  TCCACATCCAGAA  749
      ||||||| |||||
seq2  TCCACAT-CAGAA  741

seq1: chr1_175068193_175069314
seq2: B6Ng01-270K04.g_65_1188

seq1  GAATTCACAATTGTATTACTAAAAGGGCAATAAATATTGGAAGGAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATTGTATTACTAAAAGGGCAATAAATATTGGAAGGAAAATG  50

seq1  TAGGGTACAGGATGTGTCTTTCAATGTTTTACTGAGTCATATATTTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTACAGGATGTGTCTTTCAATGTTTTACTGAGTCATATATTTTGTG  100

seq1  CTGGGATATTGAAAACAAATCTCAGTCAACTAGATGAAATATGGAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATATTGAAAACAAATCTCAGTCAACTAGATGAAATATGGAAGGAA  150

seq1  ATTTAATGTAGAGGAAGAAAAGATGAGTGAAAGAATTAAGGAATCAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTAGAGGAAGAAAAGATGAGTGAAAGAATTAAGGAATCAATGG  200

seq1  GAACTCATTCCAAAATGTGAAACAGCCCAAAATGTGTCAGGAGATCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCATTCCAAAATGTGAAACAGCCCAAAATGTGTCAGGAGATCATGA  250

seq1  GAAAGAGATCATAATATTGGAGGTCATAAAATTGAGGATGCACAAGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGATCATAATATTGGAGGTCATAAAATTGAGGATGCACAAGGCTT  300

seq1  TGCACAACTCCAGGGATATTTTGAGTTAGAAAAGCTTCTGTGAAGTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACTCCAGGGATATTTTGAGTTAGAAAAGCTTCTGTGAAGTGATG  350

seq1  ATTCAATCATATATAAATTTGCAATAGATATATAAAAAAATGCAACAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATCATATATAAATTTGCAATAGATATATAAAAAAATGCAACAAAG  400

seq1  ATTGGCAGTTTAGGACTCAGAAAGAGAATGAGGAGATGATGGTTGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAGTTTAGGACTCAGAAAGAGAATGAGGAGATGATGGTTGTTTTT  450

seq1  GCAGTAAGAGTGCTTTGGATCTGGAGCTCTGGCGGAAGACAAAGTCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAGAGTGCTTTGGATCTGGAGCTCTGGCGGAAGACAAAGTCATAA  500

seq1  CACTGAATTGTTGAGACGCCAGTAGCTAATCTAGCATGGCAGTCTTAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATTGTTGAGACGCCAGTAGCTAATCTAGCATGGCAGTCTTAACC  550

seq1  CACATGGTCCAGAGCCCTGGTTTTACCCAGCAGGGACCCAAGAGTCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTCCAGAGCCCTGGTTTTACCCAGCAGGGACCCAAGAGTCAGTT  600

seq1  CTCGGAAAGTGATTATCTGGGGGAAAGCATGGCTTTTCATGGAAATCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAAAGTGATTATCTGGGGGAAAGCATGGCTTTTCATGGAAATCTGA  650

seq1  AAGGATTGCAGTTGTGAGCCTCTTGAGGCAGCTTGAAAGAAGAGTGTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTGCAGTTGTGAGCCTCTTGAGGCAGCTTGAAAGAAGAGTGTCTA  700

seq1  ACTCATTATATGGAGAATCACAATTGTCTCTTTCAATTCTCAGGATAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTATATGGAGAATCACAATTGTCTCTTTCAATTCTCAGGATAGAG  750

seq1  CTCTTAAACAAGGAGGTGGTCCTTTCTTCTTTGAATAATTCTTGAAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAACAAGGAGGTGGTCCTTTCTTCTTTGAATAATTCTTGAAATAC  800

seq1  ATGTAAGTATGAAATACAGTGCACTTACTATGTCATAAGACATTAGTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTATGAAATACAGTGCACTTACTATGTCATAAGACATTAGTGGC  850

seq1  AGAGTTGTTTACACTGGATTAATCTCAGAGGCTTTTCTTATTCTGCATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGTTTACACTGGATTAATCTCAGAGGCTTTTCTTATTCTGCATCT  900

seq1  CACTCATAACTGATAGTGTCATGGGTATCTCAGGAAATAGTTTAAAGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATAACTGATAGTGTCATGGGTATCTCAGGAAATAGTTTAAAGTGA  950

seq1  TAACTGTCCAATACATTGCCAAACTTTATCTCATTTGATGCATTTAGAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTCCAATACATTGCCAAACTTTATCTCATTTGATGCATTTAGAAG  1000

seq1  TGGGAAAATAACCTGGAATCTGACTGAGAATCACTGAATTCATCGTAAAG  1050
      ||||||||| |||||||||||||||||  ||||||| | ||||||| |||
seq2  TGGGAAAAT-ACCTGGAATCTGACTGAAGATCACTGGA-TCATCGT-AAG  1047

seq1  TGGTTATTGTAATAAAGGTTAAAGCTAAGACTCCATTTCTA--TTTTTTT  1098
      ||||||||||||||||||| || ||||||||||||||||||  |||||||
seq2  TGGTTATTGTAATAAAGGTAAAGGCTAAGACTCCATTTCTATTTTTTTTT  1097

seq1  AACA-TGAGA-CATA-GTGTATTTTTT  1122
      |||| ||||| |||| |||||||||||
seq2  AACATTGAGACCATAGGTGTATTTTTT  1124