BAC Information

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BAC

Clone NameB6Ng01-271A15
Chromosome1 (Build37)
Map Location 103,812,690 - 103,923,477
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271A15.bB6Ng01-271A15.g
ACCGA073225GA073226
length1591,071
definitionB6Ng01-271A15.b B6Ng01-271A15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,812,690 - 103,812,848)(103,922,398 - 103,923,477)
sequence
ttcatattttaaagtattgtattatatcaattaaattgattacaatgtat
ctcatttttagttattcatttttctgtgtcactctgtatgtatgtatcta
tgtggtgtgtgtgtgagtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtg

gaattcacactggacaaaagaggattattgggatgaatgtgaccacaatt
tactatgtaaatgtataaaaatactaagtagaaattttaaatcttgtcat
tttaaactaagtactgttgaagttaagttttgtaagcatggctatttact
ttttttttcttggtgatttgttttgacttttcatgtgtcaagtacaaaag
acacagtcagcaatctgaatgtgttatggtaatatcacaggacaaacatg
ctttacttcatagtactgtctcttcatctttttccttcttttttcctcaa
cctacactttggctcctagaaactgaaaagcttggaaatgcttctaaaat
tggatgaagatcaaattctcaaaagatagagagaaggggatatggaagaa
tttatcctcttgagtttagagatatttcagattgactgttaactttagaa
ttgccaattccataaggatgattactttagtcttgggtggacaaatataa
acagcttcacccaaatcattcaatatgcaaactcataaaatataaaacag
ctgtgaggactttaaatctctttacttgacagcctatctaatgtttcatg
gtttaattagtaatatcatttctcagggctgaaggttatccttcatatca
cagttatttcatttctggatgtcgaaatatatctgaatgtaggttctgag
attgttccttttaggaagatgagtgagagtattcaataagaaaccaccag
caagaattaagatcactttgactttggatcatcaaataattccatctata
ataaatccacagccataaatctcctccactctctttcatgaattggctga
catggaatctccagcagaaagctcatttaagagctgaagaggaaataaat
gaacacacaaagatggcagcaatagagccatgaattctttagtactcttc
atattagcacttttgcagaagtgattttatttaatctcatttattagtgt
agtgttacctagtgtgaaaatacactatactcagatgatagtccaagagg
aagagatcacaggattgctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103812690_103812848
seq2: B6Ng01-271A15.b_45_203

seq1  TTCATATTTTAAAGTATTGTATTATATCAATTAAATTGATTACAATGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTTAAAGTATTGTATTATATCAATTAAATTGATTACAATGTAT  50

seq1  CTCATTTTTAGTTATTCATTTTTCTGTGTCACTCTGTATGTATGTATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTTAGTTATTCATTTTTCTGTGTCACTCTGTATGTATGTATCTA  100

seq1  TGTGGTGTGTGTGTGAGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTGTGTGTGAGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT  150

seq1  GTGTGTGTG  159
      |||||||||
seq2  GTGTGTGTG  159


seq1: chr1_103922398_103923477
seq2: B6Ng01-271A15.g_62_1132 (reverse)

seq1  TAAGCAATCCTTGTTGATCTCTTTCTTCTTGGACTATCATCTGAGTTATA  50
      |||||||||||   ||||||| ||| ||||||||||||||||||| ||||
seq2  TAAGCAATCCT--GTGATCTC-TTCCTCTTGGACTATCATCTGAG-TATA  46

seq1  GTGTA-TATCACACTAGGTAACACTTAACACTAATTAAATGAGATTAAAT  99
      ||||| | |||||||||||||||||  ||||||| |||||||||||||||
seq2  GTGTATTTTCACACTAGGTAACACT--ACACTAA-TAAATGAGATTAAAT  93

seq1  AAAATCACTTCTGCAAAAGTGCCTAATATGAAGAGTACTAAAGAATTCAT  149
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAATCACTTCTGCAAAAGTG-CTAATATGAAGAGTACTAAAGAATTCAT  142

seq1  GGCTCTATTGCTGCCATTCTTTTGTGTGTTCATTTATTTCCTCTTCAGCT  199
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  GGCTCTATTGCTGCCAT--CTTTGTGTGTTCATTTATTTCCTCTTCAGCT  190

seq1  CTTAAATGAGCTTTCTGCTGGAGATTCCATGTCAGCCAATTCATGAAAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATGAGCTTTCTGCTGGAGATTCCATGTCAGCCAATTCATGAAAGA  240

seq1  GAGTGGAGGAGATTTATGGCTGTGGATTTATTATAGATGGAATTATTTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGGAGATTTATGGCTGTGGATTTATTATAGATGGAATTATTTGA  290

seq1  TGATCCAAAGTCAAAGTGATCTTAATTCTTGCTGGTGGTTTCTTATTGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCAAAGTCAAAGTGATCTTAATTCTTGCTGGTGGTTTCTTATTGAA  340

seq1  TACTCTCACTCATCTTCCTAAAAGGAACAATCTCAGAACCTACATTCAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCACTCATCTTCCTAAAAGGAACAATCTCAGAACCTACATTCAGA  390

seq1  TATATTTCGACATCCAGAAATGAAATAACTGTGATATGAAGGATAACCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCGACATCCAGAAATGAAATAACTGTGATATGAAGGATAACCTT  440

seq1  CAGCCCTGAGAAATGATATTACTAATTAAACCATGAAACATTAGATAGGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTGAGAAATGATATTACTAATTAAACCATGAAACATTAGATAGGC  490

seq1  TGTCAAGTAAAGAGATTTAAAGTCCTCACAGCTGTTTTATATTTTATGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAGTAAAGAGATTTAAAGTCCTCACAGCTGTTTTATATTTTATGAG  540

seq1  TTTGCATATTGAATGATTTGGGTGAAGCTGTTTATATTTGTCCACCCAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATATTGAATGATTTGGGTGAAGCTGTTTATATTTGTCCACCCAAG  590

seq1  ACTAAAGTAATCATCCTTATGGAATTGGCAATTCTAAAGTTAACAGTCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGTAATCATCCTTATGGAATTGGCAATTCTAAAGTTAACAGTCAA  640

seq1  TCTGAAATATCTCTAAACTCAAGAGGATAAATTCTTCCATATCCCCTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAATATCTCTAAACTCAAGAGGATAAATTCTTCCATATCCCCTTCT  690

seq1  CTCTATCTTTTGAGAATTTGATCTTCATCCAATTTTAGAAGCATTTCCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCTTTTGAGAATTTGATCTTCATCCAATTTTAGAAGCATTTCCAA  740

seq1  GCTTTTCAGTTTCTAGGAGCCAAAGTGTAGGTTGAGGAAAAAAGAAGGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCAGTTTCTAGGAGCCAAAGTGTAGGTTGAGGAAAAAAGAAGGAA  790

seq1  AAAGATGAAGAGACAGTACTATGAAGTAAAGCATGTTTGTCCTGTGATAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGAAGAGACAGTACTATGAAGTAAAGCATGTTTGTCCTGTGATAT  840

seq1  TACCATAACACATTCAGATTGCTGACTGTGTCTTTTGTACTTGACACATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATAACACATTCAGATTGCTGACTGTGTCTTTTGTACTTGACACATG  890

seq1  AAAAGTCAAAACAAATCACCAAGAAAAAAAAAGTAAATAGCCATGCTTAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCAAAACAAATCACCAAGAAAAAAAAAGTAAATAGCCATGCTTAC  940

seq1  AAAACTTAACTTCAACAGTACTTAGTTTAAAATGACAAGATTTAAAATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTAACTTCAACAGTACTTAGTTTAAAATGACAAGATTTAAAATTT  990

seq1  CTACTTAGTATTTTTATACATTTACATAGTAAATTGTGGTCACATTCATC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAGTATTTTTATACATTTACATAGTAAATTGTGGTCACATTCATC  1040

seq1  CCAATAATCCTCTTTTGTCCAGTGTGAATTC  1080
      |||||||||||||||||||||||||||||||
seq2  CCAATAATCCTCTTTTGTCCAGTGTGAATTC  1071


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