BAC Information

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BAC

Clone NameB6Ng01-271G13
Chromosome1 (Build37)
Map Location 115,784,083 - 115,785,168
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271G13.bB6Ng01-271G13.g
ACCGA073498GA073499
length1,091837
definitionB6Ng01-271G13.b B6Ng01-271G13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagagtttgtggtagtcaaatagataggacataaagaattgaa
gatagtagtggtccatctgggtcaacttaaactggcatcagggactcctt
gaacaggacataaaggtcataattttgttatccttttcccctcatggtaa
cttatcaactttaaggatacataaaactcctatagatattcttgtgcatg
tatatgtacaatatgtatatgtgtgtgtgtgtttgattaatgcatggaac
ttaaaagaaggtgatgtctatcctttttttcttaatctctgcatttacct
tttgagataaagtctctcaatgaacctgcaactggccagtttttggccaa
gcctcataaatcctcttacctcttttaaacagtgctgaggctataggtac
aagcacatggtgctaaatttcaaacgctggggcaaatggctgagatgtct
atttaacatatcaaaaaatcaaaacatatcctctgttgtactccattttg
ttttaggagatggggtctctcaaatgatgaagcatgatatgttggctaat
cctcgttggctaacaagctctcaggatgtgcctgtcttcatccttcaatt
ctggtgttacaggcacatgaggccatgccaggattttacatcaatgctag
agttttgaactcaagtcctcttgtttaaccagcaagtattattgcacaat
gagccatctcctcagccctcacatttattttcattggtttgtaagatcta
taagaaaatggagattacattaggagcttttcctattgctgcaaaaaaaa
tggtgtggcaaaggcaacctaaggaaacttgatggaattcatcatagtgg
ggaagtcaggaaagcaggacttgaggcagtgctcatgtatctattctcag
taaacaggtagtaatgaatgcagctgctaagttcacttgttgctttttat
ttagttcaagacccaggccatggcataatactgcccatagatagggtaaa
tagtcctatctcaattatcttaattctagaaagtcctcttagggatatgg
cctgccaggtcttgttctttctaagtgactctcctgttctc

gaattcctgatctctccaatacttttaacatgaaggggtgctgtattttg
tcaaatgctttttcagcatctaaggagatgatcatgtgattttttctttg
agattatttatatagaagattgcattaatgtattttttatattaaaacaa
ccttgcacccctaggatgaagcctacttgatcatgatgaaagatggtttt
gatgtgttcttggattcagtttgcaagaattttattgagtatttttacaa
cgacattcataagcaagattggtctgaagttctcttttttggttgggttc
ttgtgtggttttggtatcagagtaattgtgacttcatagaatgagttagg
tagtatgccttctgtttctattttatggaattgtttgaataaaattggtc
aaggggagttcccaaggcctgacaatgttactgaggccatggagcactca
caaaaaaggatctaaaatgactgccctttaaaaaaccctacaagcagctg
aaagagtcaggtgcaggcatttgcacccaaccaatggacagaagcagctg
atccctgttgttgaattagggaaggctgaaagaagctaaggagaagagca
atcctataggagggccagcagtcttaatgaatctagactcccgagatctt
tcaaacactagaccaccaaacaggcagcatacacaacacacatacagtag
aggacttccaggtctgtgttcattcagagatggtgcacctagccctcaag
agactggaggtcacagggagtttagaggtctgatagggtagagggtgggg
gcaaacatgtggagacagggggcggtggggaggaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115784083_115785168
seq2: B6Ng01-271G13.b_31_1121

seq1  GAATTCAGAGAGTTTGTGGTAGTCAAATAGATAGGACATAAAGAATTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGTTTGTGGTAGTCAAATAGATAGGACATAAAGAATTGAA  50

seq1  GATAGTAGTGGTCCATCTGGGTCAACTTAAACTGGCATCAGGGACTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTAGTGGTCCATCTGGGTCAACTTAAACTGGCATCAGGGACTCCTT  100

seq1  GAACAGGACATAAAGGTCATAATTTTGTTATCCTTTTCCCCTCATGGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGACATAAAGGTCATAATTTTGTTATCCTTTTCCCCTCATGGTAA  150

seq1  CTTATCAACTTTAAGGATACATAAAACTCCTATAGATATTCTTGTGCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCAACTTTAAGGATACATAAAACTCCTATAGATATTCTTGTGCATG  200

seq1  TATATGTACAATATGTATATGTGTGTGTGTGTTTGATTAATGCATGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTACAATATGTATATGTGTGTGTGTGTTTGATTAATGCATGGAAC  250

seq1  TTAAAAGAAGGTGATGTCTATCCTTTTTTTCTTAATCTCTGCATTTACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGAAGGTGATGTCTATCCTTTTTTTCTTAATCTCTGCATTTACCT  300

seq1  TTTGAGATAAAGTCTCTCAATGAACCTGCAACTGGCCAGTTTTTGGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATAAAGTCTCTCAATGAACCTGCAACTGGCCAGTTTTTGGCCAA  350

seq1  GCCTCATAAATCCTCTTACCTCTTTTAAACAGTGCTGAGGCTATAGGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATAAATCCTCTTACCTCTTTTAAACAGTGCTGAGGCTATAGGTAC  400

seq1  AAGCACATGGTGCTAAATTTCAAACGCTGGGGCAAATGGCTGAGATGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATGGTGCTAAATTTCAAACGCTGGGGCAAATGGCTGAGATGTCT  450

seq1  ATTTAACATATCAAAAAATCAAAACATATCCTCTGTTGTACTCCATTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACATATCAAAAAATCAAAACATATCCTCTGTTGTACTCCATTTTG  500

seq1  TTTTAGGAGATGGGGTCTCTCAAATGATGAAGCATGATATGTTGGCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGAGATGGGGTCTCTCAAATGATGAAGCATGATATGTTGGCTAAT  550

seq1  CCTCGTTGGCTAACAAGCTCTCAGGATGTGCCTGTCTTCATCCTTCAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTTGGCTAACAAGCTCTCAGGATGTGCCTGTCTTCATCCTTCAATT  600

seq1  CTGGTGTTACAGGCACATGAGGCCATGCCAGGATTTTACATCAATGCTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTTACAGGCACATGAGGCCATGCCAGGATTTTACATCAATGCTAG  650

seq1  AGTTTTGAACTCAAGTCCTCTTGTTTAACCAGCAAGTATTATTGCACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAACTCAAGTCCTCTTGTTTAACCAGCAAGTATTATTGCACAAT  700

seq1  GAGCCATCTCCTCAGCCCTCACATTTATTTTCATTGGTTTGTAAGATCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTCCTCAGCCCTCACATTTATTTTCATTGGTTTGTAAGATCTA  750

seq1  TAAGAAAATGGAGATTACATTAGGAGCTTTTCCTATTGCTGCAAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAATGGAGATTACATTAGGAGCTTTTCCTATTGCTGCAAAAAAAA  800

seq1  TGGTGTGGCAAAGGCAACCTAAGGAAACTTGATGGAATTCATCATAGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGGCAAAGGCAACCTAAGGAAACTTGATGGAATTCATCATAGTGG  850

seq1  GGAAGTCAGGGAAGCAGGGACTTGAGGCAGTGCTCATGTATCTATTCTCA  900
      |||||||||| ||||| |||||||||||||||||||||||||||||||||
seq2  GGAAGTCAGGAAAGCA-GGACTTGAGGCAGTGCTCATGTATCTATTCTCA  899

seq1  GTAAACAGGTAGTAATGAATGCAGCTGCTAAGTTCACTTGTTGCTTTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAGGTAGTAATGAATGCAGCTGCTAAGTTCACTTGTTGCTTTTTA  949

seq1  TTTAGTTCAAGACCCAGGCCATGGCATAATACTGCCCATAGATAGGGTAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTCAAGACCCAGGCCATGGCATAATACTGCCCATAGATAGGGTAA  999

seq1  ATAGTCCTATCTCAATTATCTTAA-TCTAGAAAGT-CTCTTAGGGATATG  1048
      |||||||||||||||||||||||| |||||||||| ||||||||||||||
seq2  ATAGTCCTATCTCAATTATCTTAATTCTAGAAAGTCCTCTTAGGGATATG  1049

seq1  CCCTG-CAGGTC-TGT--CTTCTAAGTGACTCTCCTGTTCTC  1086
       |||| |||||| |||   |||||||||||||||||||||||
seq2  GCCTGCCAGGTCTTGTTCTTTCTAAGTGACTCTCCTGTTCTC  1091


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