BAC Information

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BAC

Clone NameB6Ng01-271L14
Chromosome1 (Build37)
Map Location 112,719,896 - 112,720,544
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666508, Cdh7, LOC100041429, EG626652
Downstream geneCdh19, EG666578
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271L14.bB6Ng01-271L14.g
ACCGA073730GA073731
length1,0391,117
definitionB6Ng01-271L14.b B6Ng01-271L14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaggtatgtaagattgaacaaacttgcaacagtgctttctac
ccctgtcttccaaactataaacatagattgcaggcagaagtgtaaaccta
tttctgttctgaaaagaacatgaacaatctcacagagaaacaagctggag
accatttatattttaatttttaatattttttagcacagatcagcctcatg
catgtatatttacatttttacatttgtatactttttctgattttgtgttt
tcagtaatggtggtttcatttcttttctttctctggtcttttggttgtgg
ttggccttctcttcaatcataagtatttcttctatttgctattgactgtt
ttaatggacatatataagtcacaaaactcttttcttcttaaactatggcc
gataatcttgctggttacaatagtttagcttggtatttatggtcgtttag
tattagtagtacattgctgcagacagttttgttttctaaagtctccattg
ggaaaccagatgttattcttatactttttttatcatatgtgatttatgtt
ttttttttctatatcttccaaaatgctacttttatctatatattcacggt
tcattgagactatacatagggagtatctcttctgttcctatgaatttgga
gttccatgtgcttctatatgtatatgtatgctttgacctaatattccaga
ggttgtttttatgatcatattgaaccccttatttattccattgactgaga
atgcttctctttcatacattcctataaataaaagttttggtttatataat
atgctataattcctgaatgttcctttgacaaatattctccttttttattt
gttgcttttatggtttaaatattcatcttttatctttagctcctgatgct
ccttcttctacttgatccatgttacttggaagtattttatctcagttttc
taactgtgtcagtaatattttcaagtcaatattatttccaacttggagtt
atcttaagtaactaaagtttttaaattctgactgtcatt

gaattctttgtttagctctgagccccattttttaatggagttatttgaga
ttctggagaccaccctcttgagttctttacatatatattggatattagtc
ccctatctgatttaggataggtaaagatactttccctgtctgttggtgtc
atttttgtcttattgacagtgtcctttgccttacagagactttgttattt
tatgaggtccaatttgttgattctcaatcttacagcacaagccattgcta
ttctattcattgatgaatttccgtatattaaaccatccctgcatccctgg
aatgaaacctacttggtcaggatggatgattcttttgatgtattcatgaa
ttcagttagcgagaattttattgaatatttttgcatcaatattcaaaaag
aaaattggtctgtagttgcctatctttgttgggtctttctgtggtttagg
tatcagagtaattgtggcttcatagaatgaattgggtagagtaccttcta
cttctattttattgaatagtttgtgaagaattggaattagatcctctttg
atggtatcatagaactctgcactaaaccatctagtcctggacttttattg
gttgggagactattaatgaccgcttctatttctttagggggtataagact
gttgagatcattaacctgatcctgctttaactttgttacctggtctcttt
ccagaaatttgtacatttccaggttttccagttttgttgcatatagcctt
gtgtagaaggatctgatagtgttttggattttttcaggatctgttgtcat
gtctcccttttcctttctgattttgttaattaggatgctatccctgtacc
ctctagtgagtcttgttgagggttttatctatcttgttgattttcacaaa
gaaccagctccttgtttttttcattcttgaatagtctctttgtccacttg
gttgattttgccctgaattgatatttcctgcttctactctcttgggtgat
gcttccttttgttttagagcctttaggtgtgttgtcacctactagtgtgt
gcactctaggatctttataggcattcaagcatgattttctctagaatgct
ttcattgtcacaccgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_112719896_112720544
seq2: B6Ng01-271L14.b_49_697 (reverse)

seq1  CCAAATTCATAGGAACAGAAGAGATACTCCCTATGTATAGTCTCAATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTCATAGGAACAGAAGAGATACTCCCTATGTATAGTCTCAATGAA  50

seq1  CCGTGAATATATAGATAAAAGTAGCATTTTGGAAGATATAGAAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGAATATATAGATAAAAGTAGCATTTTGGAAGATATAGAAAAAAAAA  100

seq1  ACATAAATCACATATGATAAAAAAAGTATAAGAATAACATCTGGTTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATCACATATGATAAAAAAAGTATAAGAATAACATCTGGTTTCCC  150

seq1  AATGGAGACTTTAGAAAACAAAACTGTCTGCAGCAATGTACTACTAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGACTTTAGAAAACAAAACTGTCTGCAGCAATGTACTACTAATAC  200

seq1  TAAACGACCATAAATACCAAGCTAAACTATTGTAACCAGCAAGATTATCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGACCATAAATACCAAGCTAAACTATTGTAACCAGCAAGATTATCG  250

seq1  GCCATAGTTTAAGAAGAAAAGAGTTTTGTGACTTATATATGTCCATTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGTTTAAGAAGAAAAGAGTTTTGTGACTTATATATGTCCATTAAA  300

seq1  ACAGTCAATAGCAAATAGAAGAAATACTTATGATTGAAGAGAAGGCCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAATAGCAAATAGAAGAAATACTTATGATTGAAGAGAAGGCCAAC  350

seq1  CACAACCAAAAGACCAGAGAAAGAAAAGAAATGAAACCACCATTACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCAAAAGACCAGAGAAAGAAAAGAAATGAAACCACCATTACTGAA  400

seq1  AACACAAAATCAGAAAAAGTATACAAATGTAAAAATGTAAATATACATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAATCAGAAAAAGTATACAAATGTAAAAATGTAAATATACATGC  450

seq1  ATGAGGCTGATCTGTGCTAAAAAATATTAAAAATTAAAATATAAATGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCTGATCTGTGCTAAAAAATATTAAAAATTAAAATATAAATGGTC  500

seq1  TCCAGCTTGTTTCTCTGTGAGATTGTTCATGTTCTTTTCAGAACAGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTTGTTTCTCTGTGAGATTGTTCATGTTCTTTTCAGAACAGAAAT  550

seq1  AGGTTTACACTTCTGCCTGCAATCTATGTTTATAGTTTGGAAGACAGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACACTTCTGCCTGCAATCTATGTTTATAGTTTGGAAGACAGGGG  600

seq1  TAGAAAGCACTGTTGCAAGTTTGTTCAATCTTACATACCTAGAGAATTC  649
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGCACTGTTGCAAGTTTGTTCAATCTTACATACCTAGAGAATTC  649


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