BAC Information

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BAC

Clone NameB6Ng01-271M23
Chromosome1 (Build37)
Map Location 171,443,447 - 171,443,776
singlet/doubletsinglet
Overlap geneNuf2
Upstream geneEG383613
Downstream geneRgs5, Rgs4, LOC100039960, 1700084C01Rik, Hsd17b7, Ddr2, LOC100040571, Uap1, Uhmk1, Sh2d1b2, EG622708, Sh2d1b1, EG665574, 1700015E13Rik, Nos1ap
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271M23.bB6Ng01-271M23.g
ACCGA073794GA073795
length1,197330
definitionB6Ng01-271M23.b B6Ng01-271M23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttagctctgtaccccattttaatagggttgattctctgc
agtctaacatcttgagttctttgtatatattggatattaaccctctatca
tatttaggattggtaaagatattttcccaatctgttggtggcctttttgt
cttattgacagtgtcctttgcattataaaagccttgcaattttatgaggt
cccatttgtcaattcttgatcttagagcataagccattggcgttctgttc
aggaatttttcccctatggcacatatgttcaaggctcttccccactttct
cctttatacatttcaggagttccttgatccacttggacttgagctttgta
caaggagataagaatggatcgatttgcattcttctacatgctaactgcca
gttgtgccagcaccacttgttgaaaatgctgtcttctttccactgatggt
tttagctcctttgtcaaagatcaagtgaccataggtgtgtgggttcattt
ctgagtcttcaattctattccattgatctacctgcctgtcactgtaccaa
gaccatgcagtttttaatcataattgctctataatgcagcttgaggtcag
ggatggtgacttcaccagaatttcttttattgttgagaatagatttcgat
atcctaggtttattattattattattattccagataaattagaaaattgc
cctttgtaactctgtgaagaattgagttggaattttgatgggtattgcac
tctatctgcagattgcttttggcaagatggccatttttactatattaatc
ctgccaatccatgagcatgggagatctttccatcttctgcaatcttcttc
aattactttcttcagagacttgaagttcttatcatacagatctttcactt
gcttagttagagtcataccaaggtactgtatattatttgtgactattgtg
aagggtgttgtttccctaatttctttctcagcctgtgtatcctttgtgta
ggagacgccaccggatttgttgagtatttaatatccagctacttgctgaa
gtggtttatcagtttagagttcctctggtgaatttctagctcactaatgt
actatcatatcactctgcaaataggaattttggactctcatcaggtccat
ccctgaactcgatgttgtcgaattgcctctggggttaagggacatca
catgcatcctgaatgcacacagcactggcagcataaccaggcacagccac
atactgtttctttagcaaggaaagctgtgcttttgccagccgggggcacc
cacagcacatgttaaggtcccacggataccgttttctgtctgaactcttc
attcagcaggtgctgcagctcctgaatgtcatccataaactgcttgaact
cctctcgctcctcagccggaacggtactaaacacaacacaacaggccgag
agagttcatcagttcctaactgggaagggtacaggcaaaacctgtgcctc
tcaacactgagggagggagggagggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_171443447_171443776
seq2: B6Ng01-271M23.g_72_401

seq1  CATGCATCCTGAATGCACACAGCACTGGCAGCATAACCAGGCACAGCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATCCTGAATGCACACAGCACTGGCAGCATAACCAGGCACAGCCAC  50

seq1  ATACTGTTTCTTTAGCAAGGAAAGCTGTGCTTTTGCCAGCCGGGGGCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTTTCTTTAGCAAGGAAAGCTGTGCTTTTGCCAGCCGGGGGCACC  100

seq1  CACAGCACATGTTAAGGTCCCACGGATACCGTTTTCTGTCTGAACTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACATGTTAAGGTCCCACGGATACCGTTTTCTGTCTGAACTCTTC  150

seq1  ATTCAGCAGGTGCTGCAGCTCCTGAATGTCATCCATAAACTGCTTGAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCAGGTGCTGCAGCTCCTGAATGTCATCCATAAACTGCTTGAACT  200

seq1  CCTCTCGCTCCTCAGCCGGAACGGTACTAAACACAACACAACAGGCCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCGCTCCTCAGCCGGAACGGTACTAAACACAACACAACAGGCCGAG  250

seq1  AGAGTTCATCAGTTCCTAACTGGGAAGGGTACAGGCAAAACCTGTGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCATCAGTTCCTAACTGGGAAGGGTACAGGCAAAACCTGTGCCTC  300

seq1  TCAACACTGAGGGAGGGAGGGAGGGAGGGA  330
      ||||||||||||||||||||||||||||||
seq2  TCAACACTGAGGGAGGGAGGGAGGGAGGGA  330