BAC Information

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BAC

Clone NameB6Ng01-271P12
Chromosome1 (Build37)
Map Location 172,552,401 - 172,553,167
singlet/doubletsinglet
Overlap geneLOC640532
Upstream geneRgs5, Rgs4, LOC100039960, 1700084C01Rik, Hsd17b7, Ddr2, LOC100040571, Uap1, Uhmk1, Sh2d1b2, EG622708, Sh2d1b1, EG665574, 1700015E13Rik, Nos1ap, LOC100040002
Downstream geneOlfml2b, Atf6, Dusp12, Fcrlb, Fcrla, LOC100040778, Fcgr2b, Fcgr4, Fcgr3, 1700009P17Rik, Sdhc, Mpz, Pcp4l1, Nr1i3, Tomm40l, Apoa2, Fcer1g, Ndufs2, Adamts4, B4galt3, Ppox, Usp21, Ufc1, EG622236, Dedd, Nit1, Pfdn2, 1190002J23Rik, Pvrl4, Arhgap30, Usf1, EG226654, F11r, Refbp2, Itlna, Cd244, Ly9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271P12.bB6Ng01-271P12.g
ACCGA073911GA073912
length767311
definitionB6Ng01-271P12.b B6Ng01-271P12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaggccagcctgggacacataagacagtatctcaaaaacaaaaa
caaaaacaacccaactttgtatcgctgcagtgtcttttttctggttgtta
ctttcaagattttctgtttactattctctgatgtagttatcacattcttt
tgtctggtgtgcatatgtatgtgttcctctgctgggacttcattcagcat
ctcagatcattagttttatggttttcatccacatggagaattttcagtta
tctgagatacttctcctccacagcatgtggctccagctcagggtatgctt
ggctcctggctattatcctggggctcgcagtgtttgggaaaattcattgg
ttattttgttgcccttcctgaaccccaagttcttcctctgacagagattt
tagacagtctttattgctgcatttttaagtttattcgccattttgtctat
agtacctagaatgttgcttagttatttctttttcatttttaaatgttgtt
cataaaaaaaaaaaggaagttacctgactcctgaggggaaggaaaaaaag
tagaattattatatcactagagcctaaagaacaacatttaaaaatgaaaa
aaaaaattactaagtttccatctgtaagagaacaaaattacatatattta
aaggccttattttttcccctctggagtcagataactttcattttttaaaa
cagaggtaagtatattaatggagagagagagagagagagagagagagaga
gagagagagagagagag
tggaatgttggtttctttaaaaaatagaaatataagaatatgtttttgtt
ttaatcccaggtgtggggatgtggcactgcttcaaagcagctgactatga
tttgccttgctctcgagcagaggcctggttttgccagctgcagatggttt
ctgcgatgtgtgtgatatgtgggacttttcagagggtctataaatgcgta
gagccctgataggtggggtggatggttgctggttgtttcacgaatatgag
gcttgctcaaagttgtgctcaaagaagaatcctgaaagacattatatcca
gggatcccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_172552401_172553167
seq2: B6Ng01-271P12.b_46_812

seq1  GAATTCAAGGCCAGCCTGGGACACATAAGACAGTATCTCAAAAACAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCCAGCCTGGGACACATAAGACAGTATCTCAAAAACAAAAA  50

seq1  CAAAAACAACCCAACTTTGTATCGCTGCAGTGTCTTTTTTCTGGTTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAACCCAACTTTGTATCGCTGCAGTGTCTTTTTTCTGGTTGTTA  100

seq1  CTTTCAAGATTTTCTGTTTACTATTCTCTGATGTAGTTATCACATTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAGATTTTCTGTTTACTATTCTCTGATGTAGTTATCACATTCTTT  150

seq1  TGTCTGGTGTGCATATGTATGTGTTCCTCTGCTGGGACTTCATTCAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGTGTGCATATGTATGTGTTCCTCTGCTGGGACTTCATTCAGCAT  200

seq1  CTCAGATCATTAGTTTTATGGTTTTCATCCACATGGAGAATTTTCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGATCATTAGTTTTATGGTTTTCATCCACATGGAGAATTTTCAGTTA  250

seq1  TCTGAGATACTTCTCCTCCACAGCATGTGGCTCCAGCTCAGGGTATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGATACTTCTCCTCCACAGCATGTGGCTCCAGCTCAGGGTATGCTT  300

seq1  GGCTCCTGGCTATTATCCTGGGGCTCGCAGTGTTTGGGAAAATTCATTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTGGCTATTATCCTGGGGCTCGCAGTGTTTGGGAAAATTCATTGG  350

seq1  TTATTTTGTTGCCCTTCCTGAACCCCAAGTTCTTCCTCTGACAGAGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGTTGCCCTTCCTGAACCCCAAGTTCTTCCTCTGACAGAGATTT  400

seq1  TAGACAGTCTTTATTGCTGCATTTTTAAGTTTATTCGCCATTTTGTCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGTCTTTATTGCTGCATTTTTAAGTTTATTCGCCATTTTGTCTAT  450

seq1  AGTACCTAGAATGTTGCTTAGTTATTTCTTTTTCATTTTTAAATGTTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTAGAATGTTGCTTAGTTATTTCTTTTTCATTTTTAAATGTTGTT  500

seq1  CATAAAAAAAAAAAGGAAGTTACCTGACTCCTGAGGGGAAGGAAAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAAAAAAAAGGAAGTTACCTGACTCCTGAGGGGAAGGAAAAAAAG  550

seq1  TAGAATTATTATATCACTAGAGCCTAAAGAACAACATTTAAAAATGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTATTATATCACTAGAGCCTAAAGAACAACATTTAAAAATGAAAA  600

seq1  AAAAAATTACTAAGTTTCCATCTGTAAGAGAACAAAATTACATATATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTACTAAGTTTCCATCTGTAAGAGAACAAAATTACATATATTTA  650

seq1  AAGGCCTTATTTTTTCCCCTCTGGAGTCAGATAACTTTCATTTTTTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTTATTTTTTCCCCTCTGGAGTCAGATAACTTTCATTTTTTAAAA  700

seq1  CAGAGGTAAGTATATTAATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTAAGTATATTAATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  750

seq1  GAGAGAGAGAGAGAGAG  767
      |||||||||||||||||
seq2  GAGAGAGAGAGAGAGAG  767