BAC Information

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BAC

Clone NameB6Ng01-272A24
Chromosome1 (Build37)
Map Location 175,068,193 - 175,069,345
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041219, Wdr42a, Pea15a, Casq1, Timm23p, Atp1a2, Igsf8, Kcnj9, Kcnj10, Pigm, LOC665819, Slamf9, LOC100040274, Igsf9, Tagln2, Ccdc19, EG240916, Slamf8, Fcrl6, Dusp23, LOC100040320, Crp, LOC665875, Apcs, Olfr16, GA_x5J8B7W5Q1F-395172-396104, Olfr1408
Downstream geneGA_x5J8B7W5Q1F-344462-343889, Olfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272A24.bB6Ng01-272A24.g
ACCGA073981GA073982
length1,154446
definitionB6Ng01-272A24.b B6Ng01-272A24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaattgtattactaaaagggcaataaatattggaaggaaaatg
tagggtacaggatgtgtctttcaatgttttactgagtcatatattttgtg
ctgggatattgaaaacaaatctcagtcaactagatgaaatatggaaggaa
atttaatgtagaggaagaaaagatgagtgaaagaattaaggaatcaatgg
gaactcattccaaaatgtgaaacagcccaaaatgtgtcaggagatcatga
gaaagagatcataatattggaggtcataaaattgaggatgcacaaggctt
tgcacaactccagggatattttgagttagaaaagcttctgtgaagtgatg
attcaatcatatataaatttgcaatagatatataaaaaaatgcaacaaag
attggcagtttaggactcagaaagagaatgaggagatgatggttgttttt
gcagtaagagtgctttggatctggagctctggcggaagacaaagtcataa
cactgaattgttgagacgccagtagctaatctagcatggcagtcttaacc
cacatggtccagagccctggttttacccagcagggacccaagagtcagtt
ctcggaaagtgattatctgggggaaagcatggcttttcatggaaatctga
aaggattgcagttgtgagcctcttgaggcagcttgaaagaagagtgtcta
actcattatatggagaatcacaattgtctctttcaattctcaggatagag
ctcttaaacaaggaggtggtcctttcttctttgaataattcttgaaatac
atgtaagtatgaaatacagtgcacttactatgtcataagacattagtggc
agagttgtttacactggattaatctcagaggcttttcttattctgcatct
cactcataactgatagtgtcatgggtatctcaggaaatagtttaaagtga
taactgtccaatacattgcccaaactttatctcatttgatgcatttagaa
gtggggaaaataccctggaatctgactgagatcactgattcatcgtaaag
tgcttattgtaataaagtttaagctaagactcatttcttattttttttaa
ccatgagaacatagcgtaattttttaattaggctatttcttcattacatt
tcca
ttttagaactggtacctgaacggaagacacccagctgttggcatggtcta
aattcattggccctctgtctctgcattccgtgtgttactacctttctttc
ccaagaagattaactcaaacacaagctctctctctctctctctctctctc
tctctctctctctctctctctctctctctctctctctgtgtgactgactc
acactcacagggagagagagggaagcatgcgtgtgtctctctgagacaca
cacacacacatatatatatatatgagtgtatatgcgcgcgcctgtatatg
tatctgtatttatatatagatatataaagacacacaataaacaaacaaaa
ataattatatattttttttttgttattgtgttatggacacagagagagag
ataaaacaaactgtctctctgtctatcttctcgagcgagagagata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_175068193_175069345
seq2: B6Ng01-272A24.b_46_1199

seq1  GAATTCACAATTGTATTACTAAAAGGGCAATAAATATTGGAAGGAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATTGTATTACTAAAAGGGCAATAAATATTGGAAGGAAAATG  50

seq1  TAGGGTACAGGATGTGTCTTTCAATGTTTTACTGAGTCATATATTTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTACAGGATGTGTCTTTCAATGTTTTACTGAGTCATATATTTTGTG  100

seq1  CTGGGATATTGAAAACAAATCTCAGTCAACTAGATGAAATATGGAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATATTGAAAACAAATCTCAGTCAACTAGATGAAATATGGAAGGAA  150

seq1  ATTTAATGTAGAGGAAGAAAAGATGAGTGAAAGAATTAAGGAATCAATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGTAGAGGAAGAAAAGATGAGTGAAAGAATTAAGGAATCAATGG  200

seq1  GAACTCATTCCAAAATGTGAAACAGCCCAAAATGTGTCAGGAGATCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCATTCCAAAATGTGAAACAGCCCAAAATGTGTCAGGAGATCATGA  250

seq1  GAAAGAGATCATAATATTGGAGGTCATAAAATTGAGGATGCACAAGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGATCATAATATTGGAGGTCATAAAATTGAGGATGCACAAGGCTT  300

seq1  TGCACAACTCCAGGGATATTTTGAGTTAGAAAAGCTTCTGTGAAGTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACTCCAGGGATATTTTGAGTTAGAAAAGCTTCTGTGAAGTGATG  350

seq1  ATTCAATCATATATAAATTTGCAATAGATATATAAAAAAATGCAACAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATCATATATAAATTTGCAATAGATATATAAAAAAATGCAACAAAG  400

seq1  ATTGGCAGTTTAGGACTCAGAAAGAGAATGAGGAGATGATGGTTGTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCAGTTTAGGACTCAGAAAGAGAATGAGGAGATGATGGTTGTTTTT  450

seq1  GCAGTAAGAGTGCTTTGGATCTGGAGCTCTGGCGGAAGACAAAGTCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAGAGTGCTTTGGATCTGGAGCTCTGGCGGAAGACAAAGTCATAA  500

seq1  CACTGAATTGTTGAGACGCCAGTAGCTAATCTAGCATGGCAGTCTTAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATTGTTGAGACGCCAGTAGCTAATCTAGCATGGCAGTCTTAACC  550

seq1  CACATGGTCCAGAGCCCTGGTTTTACCCAGCAGGGACCCAAGAGTCAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTCCAGAGCCCTGGTTTTACCCAGCAGGGACCCAAGAGTCAGTT  600

seq1  CTCGGAAAGTGATTATCTGGGGGAAAGCATGGCTTTTCATGGAAATCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGAAAGTGATTATCTGGGGGAAAGCATGGCTTTTCATGGAAATCTGA  650

seq1  AAGGATTGCAGTTGTGAGCCTCTTGAGGCAGCTTGAAAGAAGAGTGTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTGCAGTTGTGAGCCTCTTGAGGCAGCTTGAAAGAAGAGTGTCTA  700

seq1  ACTCATTATATGGAGAATCACAATTGTCTCTTTCAATTCTCAGGATAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTATATGGAGAATCACAATTGTCTCTTTCAATTCTCAGGATAGAG  750

seq1  CTCTTAAACAAGGAGGTGGTCCTTTCTTCTTTGAATAATTCTTGAAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAACAAGGAGGTGGTCCTTTCTTCTTTGAATAATTCTTGAAATAC  800

seq1  ATGTAAGTATGAAATACAGTGCACTTACTATGTCATAAGACATTAGTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGTATGAAATACAGTGCACTTACTATGTCATAAGACATTAGTGGC  850

seq1  AGAGTTGTTTACACTGGATTAATCTCAGAGGCTTTTCTTATTCTGCATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGTTTACACTGGATTAATCTCAGAGGCTTTTCTTATTCTGCATCT  900

seq1  CACTCATAACTGATAGTGTCATGGGTATCTCAGGAAATAGTTTAAAGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATAACTGATAGTGTCATGGGTATCTCAGGAAATAGTTTAAAGTGA  950

seq1  TAACTGTCCAATACATTG-CCAAACTTTATCTCATTTGATGCATTTAGAA  999
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAACTGTCCAATACATTGCCCAAACTTTATCTCATTTGATGCATTTAGAA  1000

seq1  GT-GGGAAAATAACCTGGAATCTGACTGAGAATCACTGAATTCATCGTAA  1048
      || ||||||||| ||||||||||||||||| ||||||| |||||||||||
seq2  GTGGGGAAAATACCCTGGAATCTGACTGAG-ATCACTG-ATTCATCGTAA  1048

seq1  AGTGGTTATTGTAATAAAGGTTAAAGCTAAGACTCCATTTC-TATTTTTT  1097
      |||| ||||||||||||| ||| ||||||||||| |||||| ||||||||
seq2  AGTGCTTATTGTAATAAA-GTTTAAGCTAAGACT-CATTTCTTATTTTTT  1096

seq1  T--AACATGAG-ACATAGTGTATTTTTTTAATTAGGTATTTTCTTCATTT  1144
      |  | |||||| |||||| ||| |||||||||||||   |||||||| ||
seq2  TTAACCATGAGAACATAGCGTAATTTTTTAATTAGGCTATTTCTTCA-TT  1145

seq1  ACATTTCCA  1153
      |||||||||
seq2  ACATTTCCA  1154