BAC Information

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BAC

Clone NameB6Ng01-272B18
Chromosome1 (Build37)
Map Location 149,828,701 - 149,829,813
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100042792, LOC435647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272B18.bB6Ng01-272B18.g
ACCGA074017GA074018
length1,1931,112
definitionB6Ng01-272B18.b B6Ng01-272B18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcttaaacatgataaaagcaatatacaacaaactggtagcc
aacatcaaactaactggagaaaagctggaagcaatcccactaaaatcagg
gactagacaaggttgcccactttcttcctacctattcaacatagtacttg
aagccttatacagatcaattagacaacaaaaggagatcaacgggatacaa
attggaaaggaagaagttaaattatcactattcgcagatgatatgatagt
atatataagtgaccctaaaaattccaccagagaactcctaaacctggtaa
acagctttagtacagtagctggatatacaattaactcaaacaaatcagtg
gcctttctctacacaaaagatatagtgattgagaaagaaattagggaaac
aacacccttcacaacagtcacaaatataaaatacctgggtgttactctaa
ctaaggaagtgaaagatctgtatgataagaacttcaagtctctgaagaaa
aaaatcaaagaagatctcagaagatggaaatatctcccatgatcctggat
tggcagaattaatatattaaaaatggctatcttgccaaaagcaatctaca
gattcattgcaatccccatcaaaattccaactcaattattcaatgaatta
gaaagggcaatttgcaaattcatctggaataacaaaaaacctaggctagc
aaaaactattctcagcaataaaagaaccactgttggaatcaccatgcctg
acctcaagctgtactacagggtccttgtgataaaaactgcatggtactgg
tccaatgacagacaggtagattaatggaatagaactgaagacccagaaat
gaacccagccacctatggtcacttgatctttgacaagagagctaaaccat
ccaatggaaaaaagacagtatttttcaacaaattgtattagcataactga
aggttatcatgtagaaaaatttgaattgatccatttttagctcctttgac
aagctcagtctaagcagatcaggacttcacatataccagagacttctgaa
acattatagaggagagtgggggaagccttgagatattggcacagggatat
tcttgaaaggaacatccatgctgtgctgtaagatcagatcaggatgacct
cataagttgccaaggcttcgtgttaaggctaggaccaggtgca
gaattcttgagggttttattcctcaagctattactctgaaatatataagc
aaggagaggccagagcccataagacttaatgtggctgcgcatgtaaatgt
ttactaaagctaagaatgatgggctatgacagcacgatgctctctggtag
cttatggttcttttctcctcagtgtcctctactagttcaaatagacttga
gtgtcattttagatcttatacaagtaagctaatacttctgaggattttta
ttatagtcaaagaatataatatcattaatataatctccactggaggctaa
ataagctcacctattcaattttattttagactttccaattcaaaggatat
acctgcttctatactttcagcaacctaactaccatcaagaaaatttatat
gcaattaattgtttgctgctcctttgtattttactagatatatctgaata
ttatccacacatcccagaaactgagaaacacaagtgtgagatttatcacc
attttctatgcaaatcttaaattcaacaagtgttgtggttcctactttgg
gcccactaaaacaatattccatctttttgttgttgttattgttgttttgt
ttttctttttttcaatttttttactctttttattagatattttcttcatt
tacatttcaaatgttattccctttcctagtttcccctccaaaaatcccct
attgcctatcactgctttccaacccatccactcccattcctgttcctggc
attcccctatattggggtatagagccttcacagaaccaagggcctcccat
tgatgaccaagtaagtcattctctgctaaaactatagctagacccacaag
ttccactatgtgttttctttgactggtggtatagttccaaggagctctga
gggtactggttatttcatattgatgttctttctatggggcttcagtcccc
ttcagctccctgggatttcttctggctgcttcattggggacctttgctca
tcaaatggttgactgagagcatacacttcttttattttcaggcactggca
gagcctcgcaagagaagctatttatcagccttctgtcagcaagctcttgt
ttgcatctgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149828701_149829813
seq2: B6Ng01-272B18.g_67_1178 (reverse)

seq1  AGTCAGATGCCAACAAGAGCCTGCTGACAGAAGCCTGAT-AATAGCTTTC  49
      |||||||||| ||||||||| |||||||||||| ||||| |||||| |||
seq2  AGTCAGATGCAAACAAGAGCTTGCTGACAGAAGGCTGATAAATAGC-TTC  49

seq1  TCCTGCGAGGCTCTGCCAGTGCCTGGAAAATAAAGAAGTGTATGCTCTCA  99
      || |||||||||||||||||||||| |||  |||||||||||||||||||
seq2  TCTTGCGAGGCTCTGCCAGTGCCTGAAAATAAAAGAAGTGTATGCTCTCA  99

seq1  GTCAACCATTTGATGGAGCAAAAGGTCCCCAATGAAGCAGCCAG-AGAAA  148
      |||||||||||||| |||| |||||||||||||||||||||||| |||||
seq2  GTCAACCATTTGAT-GAGC-AAAGGTCCCCAATGAAGCAGCCAGAAGAAA  147

seq1  TCCCAGGGAGCTGAAGGGGACTGAAGCCCCATAGAAAGAACATCAATATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGAGCTGAAGGGGACTGAAGCCCCATAGAAAGAACATCAATATG  197

seq1  AAATAACCAGTACCCTCAGAGCTCCTTGGAACTATACCACCAGTCAAAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACCAGTACCCTCAGAGCTCCTTGGAACTATACCACCAGTCAAAGA  247

seq1  AAACACATAGTGGAACTTGTGGGTCTAGCTATAGTTTTAGCAGAGAATGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATAGTGGAACTTGTGGGTCTAGCTATAGTTTTAGCAGAGAATGA  297

seq1  CTTACTTGGTCATCAATGGGAGGCCCTTGGTTCTGTGAAGGCTCTATACC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTGGTCATCAATGGGAGGCCCTTGGTTCTGTGAAGGCTCTATACC  347

seq1  CCAATATAGGGGAATGCCAGGAACAGGAATGGGAGTGGATGGGTTGGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATAGGGGAATGCCAGGAACAGGAATGGGAGTGGATGGGTTGGAAA  397

seq1  GCAGTGATAGGCAATAGGGGATTTTTGGAGGGGAAACTAGGAAAGGGAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGATAGGCAATAGGGGATTTTTGGAGGGGAAACTAGGAAAGGGAAT  447

seq1  AACATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAGAGTAAAAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGAAATGTAAATGAAGAAAATATCTAATAAAAAGAGTAAAAAAA  497

seq1  TTGAAAAAAAGAAAAACAAAACAACAATAACAACAACAAAAAGATGGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAAGAAAAACAAAACAACAATAACAACAACAAAAAGATGGAAT  547

seq1  ATTGTTTTAGTGGGCCCAAAGTAGGAACCACAACACTTGTTGAATTTAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTAGTGGGCCCAAAGTAGGAACCACAACACTTGTTGAATTTAAG  597

seq1  ATTTGCATAGAAAATGGTGATAAATCTCACACTTGTGTTTCTCAGTTTCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCATAGAAAATGGTGATAAATCTCACACTTGTGTTTCTCAGTTTCT  647

seq1  GGGATGTGTGGATAATATTCAGATATATCTAGTAAAATACAAAGGAGCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGTGTGGATAATATTCAGATATATCTAGTAAAATACAAAGGAGCAG  697

seq1  CAAACAATTAATTGCATATAAATTTTCTTGATGGTAGTTAGGTTGCTGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAATTAATTGCATATAAATTTTCTTGATGGTAGTTAGGTTGCTGAA  747

seq1  AGTATAGAAGCAGGTATATCCTTTGAATTGGAAAGTCTAAAATAAAATTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGAAGCAGGTATATCCTTTGAATTGGAAAGTCTAAAATAAAATTG  797

seq1  AATAGGTGAGCTTATTTAGCCTCCAGTGGAGATTATATTAATGATATTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGTGAGCTTATTTAGCCTCCAGTGGAGATTATATTAATGATATTAT  847

seq1  ATTCTTTGACTATAATAAAAATCCTCAGAAGTATTAGCTTACTTGTATAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGACTATAATAAAAATCCTCAGAAGTATTAGCTTACTTGTATAA  897

seq1  GATCTAAAATGACACTCAAGTCTATTTGAACTAGTAGAGGACACTGAGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAAAATGACACTCAAGTCTATTTGAACTAGTAGAGGACACTGAGGA  947

seq1  GAAAAGAACCATAAGCTACCAGAGAGCATCGTGCTGTCATAGCCCATCAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAACCATAAGCTACCAGAGAGCATCGTGCTGTCATAGCCCATCAT  997

seq1  TCTTAGCTTTAGTAAACATTTACATGCGCAGCCACATTAAGTCTTATGGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCTTTAGTAAACATTTACATGCGCAGCCACATTAAGTCTTATGGG  1047

seq1  CTCTGGCCTCTCCTTGCTTATATATTTCAGAGTAATAGCTTGAGGAATAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCCTCTCCTTGCTTATATATTTCAGAGTAATAGCTTGAGGAATAA  1097

seq1  AACCCTCAAGAATTC  1113
      |||||||||||||||
seq2  AACCCTCAAGAATTC  1112