MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-272H04
Chromosome	1 (Build37)
Map Location	29,956,591 - 29,957,316
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG623924, EG433283, LOC100040665
Downstream gene	LOC665944, EG624138, LOC100040699, Phf3, EG638995
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG623924 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623924 MGI:3647053
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	EG433283 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433283 MGI:3646042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1509 ESTs, 4 Proteins

name	LOC100040665 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins

name	LOC665944 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665944
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	EG624138 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624138 MGI:3645176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 71 Proteins pseudo : _no_value

name	LOC100040699 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040699
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Phf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213109 MGI:2446126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG638995 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:638995 MGI:3643372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	EG623924 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82878868 GeneID:623924 MGI:3647053
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG623924 transcript_id : XM_888439.1

name	EG433283 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233792 GeneID:433283 MGI:3646042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 mRNAs, 1509 ESTs, 4 Proteins product : predicted gene, EG433283, transcript variant 1 transcript_id : XM_484844.5

name	LOC100040665 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233776 GeneID:100040665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 ESTs, 6 Proteins product : similar to Electron transferring flavoprotein, alpha polypeptide transcript_id : XM_001475043.1

name	Phf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487308 GeneID:213109 MGI:2446126
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 3 transcript_id : NM_001081080.1

name	EG638995 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363264 GeneID:638995 MGI:3643372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : predicted gene, EG638995 transcript_id : XM_980826.1

name	EG623924 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82878869 GeneID:623924 MGI:3647053
definition	codon_start : 1 product : similar to cpn10 protein protein_id : XP_893532.1

name	EG433283 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51704904 GeneID:433283 MGI:3646042
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_484844.1

name	LOC100040665 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233777 GeneID:100040665
definition	codon_start : 1 product : similar to Electron transferring flavoprotein, alpha polypeptide protein_id : XP_001475093.1

name	Phf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487309 GeneID:213109 MGI:2446126
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0003746 - translation elongation factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : PHD finger protein 3 protein_id : NP_001074549.1

name	EG638995 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363265 GeneID:638995 MGI:3643372
definition	codon_start : 1 product : hypothetical protein protein_id : XP_985920.1

name	LOC665944 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665944
definition	number : 1 pseudo : _no_value

name	LOC100040699 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040699
definition	number : 2 pseudo : _no_value

name	LOC100040699 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040699
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:225035
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:493314
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:254591
definition	standard_name : ORS_179

name	(CDS detail)
type	STS
link
xref	UniSTS:128892
definition	standard_name : D1Mit526

name	(CDS detail)
type	STS
link
xref	UniSTS:158782
definition	standard_name : AI315311

name	(CDS detail)
type	STS
link
xref	UniSTS:210209
definition	standard_name : RH136214

name	(CDS detail)
type	STS
link
xref	UniSTS:178367
definition	standard_name : AU020177

name	(CDS detail)
type	STS
link
xref	UniSTS:162992
definition	standard_name : RH126284

name	EG624138 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94363263 GeneID:624138 MGI:3645176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 25 ESTs, 71 Proteins product : predicted gene, EG624138 pseudo : _no_value transcript_id : XR_001811.1

clone name	MSMg01-418A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052I19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-438J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-482N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-213M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453M18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-070B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119K08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-150H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320F08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-272H04.b	B6Ng01-272H04.g
ACC	GA074271	GA074272
length	731	1,188
definition	B6Ng01-272H04.b	B6Ng01-272H04.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcagggaggagacatctttgtcatgaggagaaatatagagaagtag ttggggtttagtgagacatattagtgaggtacctgtgtactgaagtccat gggttccaagatcctatacctgtcatgatctttaatcagcctcacatcac aattatgaccaaaaaattgggggggggggaatgtagagatacactctcag tggaattcaatcactgtgtactacattagttaataaattttgaatatttt gttcccaattctaattgggaacaaaatacccatggaaggagttacagaga caaagtttggagctgagacgaaaggatggaccatctagagactgccatat ccagggatccaccccataatcagcttccaaacgctgacaccattgcatac actagcaagattttatcgaaaggacccagatgtagctgtctcttgtgaga ctatgccggggcctagcaaacacagaagtggatgctcacagtcagctatt gcatgtatcacagggcccccaatggaggagctagagaaagtatccaagta gctaaagaggtctgcaaccctatcggtggaacaacattatgaaactaacc agtaccccggagttcttgactctagctgcatatgtatcaaaagatggcct agtttggccatcactgaaaaagagaggcccattggacatgcaaactgtat atgccccagtacagggggaaacgccagggcc	gaattccttctttatgtcctctaccatcatcatgaaatatgcttttaaat ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg attcttacgtttacctttcgccatctggcaatctctggagttagttgtta tagttgtctttgttaaaagattgttcctctgttgattttgttaccctcta tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag cagtctctgtaggcaagctctcctctctcagggaaggtgtacagttatct ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacagaatctt tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt cgaagatgtcgcagcctcagaagctctgtggctcttgccgggaaggtggc tggttgtctggagctgaggatggtgccgccccagaatctctgcgactctc tcgcccgtcccagaaacggctggcactctgtattccacacggtcacccgt gcagcctgccctccgcggagtcccggagccaagaaggctcccgccggcgc ctgtgccacaaacctctcaggccaggcagacccccgtgctctcaccagga aggtggccggctgtctggagctgaagatggcgccgcccagaagctctgcg actctctcgcccgtcccagaaacagctggcactctgtattccacacggtc acccgtgcagcctgccctccgcggagtcccggagccaagaaaggctcccg cccggcgcctgtgccacaaacctctcaggccaggtagacccccgtgctct caccaggaaggtggccggctgtctggagctgaagatggcgccgcccagaa gctctgcgactctctcgcccgtcccagaaacagctggcactctgtattcc acacggtcacccgtgcagcctgccctccggcggagttcccgagcagatgc tcccgccggcgcctgttgcacaacctctcagccagcagacctcgtgctct caccagaaggttgtcggctgatctgaacctgagatggcgccttaatggaa gactttaatgtggtcttttgtacgacgctcattcagag
quality values	Open. Hide. 58 39 15 25 58 31 15 52 49 38 35 41 62 47 47 37 29 51 47 62 62 62 62 62 62 44 39 47 62 62 62 30 34 18 22 23 17 24 34 28 23 23 28 27 28 62 59 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 51 49 39 35 28 28 28 43 34 49 31 33 46 46 59 59 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 59 59 49 59 59 51 62 62 62 62 62 42 54 62 62 59 62 62 62 62 62 62 62 51 62 59 59 62 62 62 62 62 59 62 62 62 62 62 59 59 62 59 54 59 59 62 50 59 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 56 59 62 59 59 59 62 62 59 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 59 59 19 34 23 27 27 29 28 51 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 56 59 59 62 62 59 51 62 62 62 62 56 56 59 45 43 44 24 43 43 51 62 59 59 59 62 59 56 56 50 59 62 59 62 62 59 59 43 59 59 24 34 26 18 22 22 51 62 62 38 56 56 56 56 56 62 62 56 56 51 56 51 51 62 62 51 50 56 56 50 56 56 62 62 54 62 62 62 62 15 15 10 9 10 11 56 56 51 56 56 56 56 50 40 39 41 47 62 62 62 62 56 62 47 62 54 47 33 62 62 56 56 62 42 43 38 32 30 31 30 43 38 36 56 62 50 62 56 41 56 46 52 43 52 52 52 52 42 52 31 52 47 52 47 47 47 35 52 43 45 38 41 52 52 38 38 43 33 47 42 52 47 34 48 52 10 31 36 54 52 54 54 33 54 39 32 52 50 47 28 20 47 36 26 52 42 47 33 38 52 52 52 52 42 51 52 53 50 47 47 25 9 37 46 47 54 46 27 42 38 33 34 52 33 54 58 32 32 34 17 30 35 54 26 42 42 29 31 47 22 34 37 41 41 40 37 41 37 23 37 33 50 37 50 45 14 45 24 34 21 27 32 19 37 34 28 6 38 37 15 39 37 34 22 25 25 37 51 48 42 46 38 19 22 46 50 42 39 20 32 9 9 24 19 20 21 27 37 21 20 32 42 14 16 21 23 12 16 23 25 42 16 18	Open. Hide. 62 47 39 47 62 62 62 62 62 62 30 30 22 18 19 25 28 27 27 28 28 27 28 40 49 39 62 59 59 62 59 59 62 62 54 62 62 62 62 59 62 62 62 62 62 54 62 62 62 62 62 59 59 62 62 49 49 46 28 48 32 43 48 62 54 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 37 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 54 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 49 18 49 45 41 58 58 54 58 58 58 58 58 58 58 58 42 52 58 58 52 58 58 58 58 58 58 58 54 54 58 54 58 54 58 54 54 54 58 58 54 58 58 58 58 50 51 58 58 49 58 54 58 50 58 54 58 49 50 58 58 53 58 58 58 49 58 58 54 51 51 58 49 58 48 58 58 58 50 58 58 58 58 53 58 58 51 53 54 58 58 58 49 58 58 58 39 51 50 51 49 58 44 35 46 50 58 50 51 58 46 30 58 46 39 58 41 58 49 23 49 35 58 50 58 58 52 49 41 39 58 39 52 54 58 50 58 52 53 50 38 50 53 29 40 50 50 42 51 53 54 53 52 23 54 33 37 38 41 51 47 41 37 51 16 44 39 44 49 37 34 49 53 54 37 46 30 35 51 39 42 29 54 54 39 18 51 32 47 38 23 33 22 54 40 40 46 31 34 41 54 54 51 32 53 53 33 54 53 31 37 31 35 46 25 21 33 32 29 46 54 46 37 34 53 45 31 32 53 40 42 32 51 23 33 33 53 31 53 40 53 36 30 41 40 40 33 41 34 40 40 32 28 51 47 32 33 31 40 32 37 33 51 30 27 30 45 31 31 42 43 30 33 51 31 30 30 30 32 40 31 46 28 30 26 31 38 40 31 31 31 33 31 36 26 26 26 32 21 40 33 37 29 31 31 31 30 37 30 9 31 25 46 43 32 31 30 10 31 37 25 36 30 32 48 12 25 27 9 27 18 46 31 9 7 40 9 24 24 25 30 31 31 33 37 25 28 22 33 24 24 24 39 36 26 28 32 30 31 26 11 22 16 6 32 28 25 38 32 36 35 31 20 36 36 38 26 20 16 26 27 21 21 28 27 27 31 32 34 13 14 21 29 22 31 21 31 30 10 10 14 12 17 33 37 33 25 16 13 22 33 18 18 29 27 30 25 7 25 18 30 23 12 15 12 29 17 13 21 24 16 20 32 25 21 32 29 24 32 19 32 11 32 19 32 17 32 24 22 31 15 24 21 16 19 22 17 39 21 19 22 34 48 32 26 24 32 21 22 10 24 13 17 24 28 14 16 17 9 16 18 28 13 18 16 6 5 9 12 18 10 22 15 13 30 28 10 10 16 10 17 18 15 8 14 13 11 34 13 12 8 23 8 7 7 19 13 12 5 6 10 16 9 9 6 3 3 5 10 6 5 3 3 7 18 9 30 18 15 9 3 2 4 6 5 12 25 12 17 5 8 3 3 4 10 18 17 8 7 22 8 21 16 8 11 5 5 12 15 6 11 10 19 13 15 5 22 8 5 8 6 3 6 8 4 4 3 15 8 3 3 3 9 21 5 4 3 3 3 7 15 8 4 2 2 1 6 7 14 4 4 6 4 15 6 8 3 8 5 21 6 5 3 17 11 6 6 9 17 12 8 4 14 4 5 1 1 2 4 17 11 13 9 6 4 9 9 2 3 4 18 22 8 6 5 11 3 3 4 6 4 4 9 3 5 6 4 2 3 2 2 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_29956591_29957316
seq2: B6Ng01-272H04.b_44_774

seq1  GAATTCAGGGAGGAGACATCTTTGTCATGAGGAGAAATATAGAGAAGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGAGGAGACATCTTTGTCATGAGGAGAAATATAGAGAAGTAG  50

seq1  TTGGGGTTTAGTGAGACATATTAGTGAGGTACCTGTGTACTGAAGTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGTTTAGTGAGACATATTAGTGAGGTACCTGTGTACTGAAGTCCAT  100

seq1  GGGTTCCAAGATCCTATACCTGTCATGATCTTTAATCAGCCTCACATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCCAAGATCCTATACCTGTCATGATCTTTAATCAGCCTCACATCAC  150

seq1  AATTATGACCAAAAAATTGGGGGGGGGGGAATGTAGAGATACACTCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGACCAAAAAATTGGGGGGGGGGGAATGTAGAGATACACTCTCAG  200

seq1  TGGAATTCAATCACTGTGTACTACATTAGTTAATAAATTTTGAATATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTCAATCACTGTGTACTACATTAGTTAATAAATTTTGAATATTTT  250

seq1  GTTCCCAATTCTAATTGGGAACAAAATACCCATGGAAGGAGTTACAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAATTCTAATTGGGAACAAAATACCCATGGAAGGAGTTACAGAGA  300

seq1  CAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTGGAGCTGAGACGAAAGGATGGACCATCTAGAGACTGCCATAT  350

seq1  CCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATCCACCCCATAATCAGCTTCCAAACGCTGACACCATTGCATAC  400

seq1  ACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGA  450

seq1  CTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCAGCTATT  500

seq1  GCATGTATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAGTATCCAAGTA  550

seq1  GCTAAAGAGGTCTGCAACCCTATCGGTGGAACAACATTATG-AACTAACC  599
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCTAAAGAGGTCTGCAACCCTATCGGTGGAACAACATTATGAAACTAACC  600

seq1  AGTACCCCGGAGTTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCCGGAGTTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCT  650

seq1  AG-TTGGCCATCACTG-AAAAGAGAGGCCCATTGGACATGCAAACTGTAT  697
      || ||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGTTTGGCCATCACTGAAAAAGAGAGGCCCATTGGACATGCAAACTGTAT  700

seq1  ATGCCCCAGTACAGGGG--AACGCCAGGGCC  726
      |||||||||||||||||  ||||||||||||
seq2  ATGCCCCAGTACAGGGGGAAACGCCAGGGCC  731

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information