BAC Information

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BAC

Clone NameB6Ng01-272L23
Chromosome1 (Build37)
Map Location 18,981,605 - 18,982,511
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040126, Crisp4, EG574082, EG654460, Defb17, LOC383499
Downstream geneEG435611, LOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272L23.bB6Ng01-272L23.g
ACCGA074495GA074496
length8061,012
definitionB6Ng01-272L23.b B6Ng01-272L23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaggacaaaagtaactttgcatcattaaaaagattctcataac
ttctcataaccaatccagcctcaaaactgttgacctacaacttgtcctgc
ctacaagttgtgctctgtggtaaggtggcagaaaaactggggaagagatg
aatcgctgactgatccaacttgagacccaagcaaagagcagaagcccact
ccccatattgcctggagggccaggaaccagaggctggatagctcagaaac
ctatgaaaccaccaaatacaaccagaaaaagtcaataaaatgattcctaa
tattttgctaacttgtagacaagagtctatcacagttgtcagaagagagg
cttcatccagcaatggatggaaacagatgcaaagacagatagccaaacat
taggtagagcttgtggaatctgccggaaggtgggtaatgtaggagacaaa
gaggccaaggacttcacaagaaaatccacagaatcaacctgcctgggctg
aaaggagaccatagagactaaactgacaatcagggaggtagaggtctgat
ctaggccctctacataaaattatgtttatgtagcttggtgttcttgtgga
actcctaacagtggagactgggctgtctttcactcttttgcctgctttgg
ggacctgtttccttccactgtgttgcttcttccagcctgaatatgagggg
aggtgccttgtctgataacaacttgatatgctatgtttggttgatatcct
tgggaggcttgcccttttcagaagagatgtgaaggaggagtagatgggga
aggaat

gaattcatgaatcagaaaacacaaaaccaactcctagagtcaaatcacaa
gaaatagataagaccaatgaggagctattatcaataatcacgttgctata
attcacttttatttacctagtcactatagatagcaagtttgttttcacca
atacattaattacttcatttagatttggagtaattgttcaagggagaaaa
atggatagtacattttaaaatgatatccattaaatgttcaccctggaata
taatatgaagagagacaaatatacttgaatgtttacaaggtccaacactt
aaatattcatcttagcttggaaggtttagagcacaacttggtgggagacc
gcttacttagaatggatgaaaccctgtgttaatcctcattaccagaagag
agaaaaatgaggcaggaaggagacagagttgtccacgccactcatttctt
ttcaatgtggcactggaagcattaaccagaacaataacaaggaaaagaat
gagatacaaataagaaaacaactcaaattacccctatttacagatggtat
attacataagagaccctaaaatttccacgcaaaaactagaaacaatcaac
agcttcaacaaactagcaggacacaaaataaacttataaataaccaggag
ggtttttttatacaacaacagcaaacacactaaaaatgagatcatgtgcc
tgataccaaatatgttagcttctcaaacataacaaagtatcttgggataa
atctaatcttgatgtaaatgcctctgaagaaaaaaattgagaaagacact
agaaaatggggagacatctcatgttcatggatcagtagaatgagtttaaa
attgaagatccttccaaacaaatttacagatcaaactaaatcccaatcaa
aattcccacaacatgtttcaaagggcgtagaaaaaataaatagcctttaa
aatttcatatgggaaccagaaaaagaacctgggatccctaaaggtaacac
taatcaaaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_18981605_18982511
seq2: B6Ng01-272L23.g_63_969

seq1  GAATTCATGAATCAGAAAACACAAAACCAACTCCTAGAGTCAAATCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAATCAGAAAACACAAAACCAACTCCTAGAGTCAAATCACAA  50

seq1  GAAATAGATAAGACCAATGAGGAGCTATTATCAATAATCACGTTGCTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGATAAGACCAATGAGGAGCTATTATCAATAATCACGTTGCTATA  100

seq1  ATTCACTTTTATTTACCTAGTCACTATAGATAGCAAGTTTGTTTTCACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTTTTATTTACCTAGTCACTATAGATAGCAAGTTTGTTTTCACCA  150

seq1  ATACATTAATTACTTCATTTAGATTTGGAGTAATTGTTCAAGGGAGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTAATTACTTCATTTAGATTTGGAGTAATTGTTCAAGGGAGAAAA  200

seq1  ATGGATAGTACATTTTAAAATGATATCCATTAAATGTTCACCCTGGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAGTACATTTTAAAATGATATCCATTAAATGTTCACCCTGGAATA  250

seq1  TAATATGAAGAGAGACAAATATACTTGAATGTTTACAAGGTCCAACACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGAAGAGAGACAAATATACTTGAATGTTTACAAGGTCCAACACTT  300

seq1  AAATATTCATCTTAGCTTGGAAGGTTTAGAGCACAACTTGGTGGGAGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCATCTTAGCTTGGAAGGTTTAGAGCACAACTTGGTGGGAGACC  350

seq1  GCTTACTTAGAATGGATGAAACCCTGTGTTAATCCTCATTACCAGAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTTAGAATGGATGAAACCCTGTGTTAATCCTCATTACCAGAAGAG  400

seq1  AGAAAAATGAGGCAGGAAGGAGACAGAGTTGTCCACGCCACTCATTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGAGGCAGGAAGGAGACAGAGTTGTCCACGCCACTCATTTCTT  450

seq1  TTCAATGTGGCACTGGAAGCATTAACCAGAACAATAACAAGGAAAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTGGCACTGGAAGCATTAACCAGAACAATAACAAGGAAAAGAAT  500

seq1  GAGATACAAATAAGAAAACAACTCAAATTACCCCTATTTACAGATGGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAAATAAGAAAACAACTCAAATTACCCCTATTTACAGATGGTAT  550

seq1  ATTACATAAGAGACCCTAAAATTTCCACGCAAAAACTAGAAACAATCAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATAAGAGACCCTAAAATTTCCACGCAAAAACTAGAAACAATCAAC  600

seq1  AGCTTCAACAAACTAGCAGGACACAAAATAAACTTATAAATAACCAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCAACAAACTAGCAGGACACAAAATAAACTTATAAATAACCAGGAG  650

seq1  GGTTTTTTTATACAACAACAGCAAACACACTAAAAATGAGATCATGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTATACAACAACAGCAAACACACTAAAAATGAGATCATGTGCC  700

seq1  TGATACCAAATATGTTAGCTTCTCAAACATAACAAAGTATCTTGGGATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCAAATATGTTAGCTTCTCAAACATAACAAAGTATCTTGGGATAA  750

seq1  ATCTAATCTTGATGTAAATGCCTCTGAAGAAAAAAATTGAGAAAGACACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATCTTGATGTAAATGCCTCTGAAGAAAAAAATTGAGAAAGACACT  800

seq1  AGAAAATGGGGAGACATCTCATGTTCATGGATCAGTAGAATGAGTTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGGGGAGACATCTCATGTTCATGGATCAGTAGAATGAGTTTAAA  850

seq1  ATTGAAGATCCTTCCAAACAAATTTACAGATCAAACTAAATCCCAATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGATCCTTCCAAACAAATTTACAGATCAAACTAAATCCCAATCAA  900

seq1  AATTCCC  907
      |||||||
seq2  AATTCCC  907


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