BAC Information

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BAC

Clone NameB6Ng01-272O22
Chromosome1 (Build37)
Map Location 182,121,134 - 182,122,296
singlet/doubletsinglet
Overlap geneCabc1
Upstream geneSmyd3, LOC433941, Tfb2m, LOC100040874, 9630058J23Rik, Sccpdh, Gm1305, Ahctf1, LOC100040914, LOC100042190, Cdc42bpa
Downstream genePsen2, EG277333, Itpkb, 6330403A02Rik, Gm821, Parp1, Lin9, Mixl1, LOC666431, Acbd3, H3f3a, BC031781, Lefty2, Pycr2, Lefty1, Tmem63a, Ephx1, 9130409I23Rik, EG625597, Fgfr3-ps, Nvl, Cnih4, Wdr26
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272O22.g
ACCGA074633
length1,161
definitionB6Ng01-272O22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttaagagttattctctccagacctggttaaatctgaaaagac
cacttcagaaagagctctgtggggttccttgtcttcattctgtcctctga
gggtaagtcacactgtcttgatttatgcatgaggaagtgagccacactgg
tcccaggagccacactggtcccggtggcctggaggtcaaacatagtattt
aagctgaagctggaaaccgatctttgttgtcagtctgtctgtcagcctgc
agtttgttaagtgcccaggagctagaagacctgctgttcactgggctggt
gatatgtcctggagacttgtttgcataaaatgccaggtcttggcatggag
aagggaggcagagccaattgctgatagttcgccaatggttgtcatttgac
agtgctcacagacaactccgttctttgagaaagtgaaaagtaactgagtg
gttctcgctccccgaggtgttggtagctaccactggccatcaaagggcag
gctgggcattgctgcggccaggttagttgagaatgtcctgtgaacagcaa
cagccagagcagactagcttcctgggcaacagccgcctgcttcctccgct
ctccccgcttccctgttgtagacaggagtgggatgaatctaggaaaacat
gcttgtgtctgcagactcatgaagtcagcgtggagactcacgcagcctga
ctcataaaaactgagtttgaactggggagggggtcggctctgctattgcc
atgcccatgtgtgtatgtgctagtgggtgaagcacacagagaacgtgtgt
atgtgcagtggtgcgaggtgtgtctttctctgcgtgtttatgtccaccat
gtttccaagctggcaggcagcacgctgaaccacctctctggggtggtgcc
tcatccgacattgctaaataaaccactctggtgaggaccaacccagcctt
tccagcactgcctgtctccttgactcagagtgatcctggactttataggg
agagctttaattctttctttttttaaaaagatattagttatttgtgcttc
ttttttgctttcactggtctatagcagattcttgcatggtcacaatgttc
ataatacacctccgatttaatggtctggaattccagtgccatgcgtaaat
accttaaatac
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_182121134_182122296
seq2: B6Ng01-272O22.g_66_1226 (reverse)

seq1  GTATTTAAGGTATTTACGGCAT-GCACTGGGTATCTAGAACCATT-AATT  48
      ||||||||||||||||| |||| |||||||   || || |||||| ||| 
seq2  GTATTTAAGGTATTTAC-GCATGGCACTGGAATTCCAG-ACCATTAAATC  48

seq1  GGA-GTG-ATTATGAACATTGTGACCATGCAGGTATCCTGCTATAGACCC  96
      ||| ||| ||||||||||||||||||||||| | || |||||||||| ||
seq2  GGAGGTGTATTATGAACATTGTGACCATGCAAGAAT-CTGCTATAGA-CC  96

seq1  AGTGAAAGCAAAAAAG-AGCACAAATAACTAATATCTTTTTTAAAAAAGA  145
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  AGTGAAAGCAAAAAAGAAGCACAAATAACTAATATCTTTTTAAAAAAAGA  146

seq1  AAGAATTAAAAGCTCTCCCTATAAAGTCCAGGATCACTTCTGAGTCAGGG  195
      ||||||| ||||||||||||||||||||||||||||| ||||||||| ||
seq2  AAGAATT-AAAGCTCTCCCTATAAAGTCCAGGATCAC-TCTGAGTCAAGG  194

seq1  AGACAGGCAGTGCTGGGAAAGGCTGGGTTGGTCCTCACCAGAGTGGTTTA  245
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGACAGGCAGTGCT-GGAAAGGCTGGGTTGGTCCTCACCAGAGTGGTTTA  243

seq1  TTTAGCAATGTCGGATGAGGCACCACCCCAGAGAGGTGGTTCAGCGTGCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCAATGTCGGATGAGGCACCACCCCAGAGAGGTGGTTCAGCGTGCT  293

seq1  GCCTGCCAGCTTGGAAACATGGTGGACATAAACACGCAGAGAAAGACACA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCAGCTTGGAAACATGGTGGACATAAACACGCAGAGAAAGACACA  343

seq1  CCTCGCACCACTGCACATACACACGTTCTCTGTGTGCTTCACCCACTAGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCACCACTGCACATACACACGTTCTCTGTGTGCTTCACCCACTAGC  393

seq1  ACATACACACATGGGCATGGCAATAGCAGAGCCGACCCCCTCCCCAGTTC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACACATGGGCATGGCAATAGCAGAGCCGACCCCCTCCCCAGTTC  443

seq1  AAACTCAGTTTTTATGAGTCAGGCTGCGTGAGTCTCCACGCTGACTTCAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGTTTTTATGAGTCAGGCTGCGTGAGTCTCCACGCTGACTTCAT  493

seq1  GAGTCTGCAGACACAAGCATGTTTTCCTAGATTCATCCCACTCCTGTCTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGCAGACACAAGCATGTTTTCCTAGATTCATCCCACTCCTGTCTA  543

seq1  CAACAGGGAAGCGGGGAGAGCGGAGGAAGCAGGCGGCTGTTGCCCAGGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGGGAAGCGGGGAGAGCGGAGGAAGCAGGCGGCTGTTGCCCAGGAA  593

seq1  GCTAGTCTGCTCTGGCTGTTGCTGTTCACAGGACATTCTCAACTAACCTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCTGCTCTGGCTGTTGCTGTTCACAGGACATTCTCAACTAACCTG  643

seq1  GCCGCAGCAATGCCCAGCCTGCCCTTTGATGGCCAGTGGTAGCTACCAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCAGCAATGCCCAGCCTGCCCTTTGATGGCCAGTGGTAGCTACCAAC  693

seq1  ACCTCGGGGAGCGAGAACCACTCAGTTACTTTTCACTTTCTCAAAGAACG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCGGGGAGCGAGAACCACTCAGTTACTTTTCACTTTCTCAAAGAACG  743

seq1  GAGTTGTCTGTGAGCACTGTCAAATGACAACCATTGGCGAACTATCAGCA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTCTGTGAGCACTGTCAAATGACAACCATTGGCGAACTATCAGCA  793

seq1  ATTGGCTCTGCCTCCCTTCTCCATGCCAAGACCTGGCATTTTATGCAAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTCTGCCTCCCTTCTCCATGCCAAGACCTGGCATTTTATGCAAAC  843

seq1  AAGTCTCCAGGACATATCACCAGCCCAGTGAACAGCAGGTCTTCTAGCTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCCAGGACATATCACCAGCCCAGTGAACAGCAGGTCTTCTAGCTC  893

seq1  CTGGGCACTTAACAAACTGCAGGCTGACAGACAGACTGACAACAAAGATC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCACTTAACAAACTGCAGGCTGACAGACAGACTGACAACAAAGATC  943

seq1  GGTTTCCAGCTTCAGCTTAAATACTATGTTTGACCTCCAGGCCACCGGGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGCTTCAGCTTAAATACTATGTTTGACCTCCAGGCCACCGGGA  993

seq1  CCAGTGTGGCTCCTGGGACCAGTGTGGCTCACTTCCTCATGCATAAATCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTGGCTCCTGGGACCAGTGTGGCTCACTTCCTCATGCATAAATCA  1043

seq1  AGACAGTGTGACTTACCCTCAGAGGACAGAATGAAGACAAGGAACCCCAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTGTGACTTACCCTCAGAGGACAGAATGAAGACAAGGAACCCCAC  1093

seq1  AGAGCTCTTTCTGAAGTGGTCTTTTCAGATTTAACCAGGTCTGGAGAGAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCTTTCTGAAGTGGTCTTTTCAGATTTAACCAGGTCTGGAGAGAA  1143

seq1  TAACTCTTAAAGGAATTC  1163
      ||||||||||||||||||
seq2  TAACTCTTAAAGGAATTC  1161