BAC Information

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BAC

Clone NameB6Ng01-273I22
Chromosome1 (Build37)
Map Location 63,203,306 - 63,321,983
singlet/doubletdoublet
Overlap geneNdufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik
Upstream genePard3b, LOC667592, Nrp2, LOC100043070, A430093A21Rik
Downstream geneLOC667644, LOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273I22.bB6Ng01-273I22.g
ACCGA075100GA075101
length1,1601,130
definitionB6Ng01-273I22.b B6Ng01-273I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,203,306 - 63,204,456)(63,320,849 - 63,321,983)
sequence
gaattccactttcatacatgtgtaatctgatcacgttcacctctcattgc
cctcggagcttccttcccacccctctaagctacctttgctcagacaggat
ctttctacgttcatgctgtctggtttgacttagatgtgaaagtgtactgg
tatgttagagaacccagtgtgtcaaagattgaacagtgacattacagatg
tggctgcttttttttttttaaaaaaggaaaacgatagctgagaacagttg
taacactcatcttcaatccaagtacttaggaggtaaagacagaaagttct
tctgctacacagagttcaaggccagcctgggctacaagaaactcaaaaat
caaaatgaaatcccaaacagcagcctggagcacagcttactgcttctcac
ccagctccttcagtggggaagatctcttcagtgcataagttgtcagagtc
aactttattaagcaagtctttcagagctactaaggcttcagcatccacca
agcctcctgcaatcgctgccacagcattgccttcaaaattctgtaactgg
aaacagaaaagggcatctctaagaaacctacagtcagcaaagaccatgac
tgttcaggaaataaaccaagtcattttcaagcatccagagtagcaggagg
cacagccgtctctcctgaattagtgtagctaccactgcacattaaagaag
ctttttacagcaaatgcagaggaaaaccacactggaaacaatgcagaaat
caacaaattgtggggaccccagccacaacagacacatctacaccatggct
cttgcagctattgctcaaggaaccagaaaataaagagtctaagagccagc
gtaccagaagtctgctgtaaagcagtgtctcctagaaaggctgcataaac
aagatccgaataccaataccaacaggaattttaacatggaaagggagaaa
aattccacaaggtctcacctctagaacaaagaactgcaagcaactgactg
ctgggagaaaaaagatttagcttcttctcagaatgaacccccaataatag
gttgtccagtacagagcagtcagtcagcttgaaatcatatatacacaaca
ataaaaatgtagagtctaattgtgccatgtacataaactttaataattta
cctaatatat
gaattcacaggctgcctggactgaatattgagaccctgtctcaaaaatta
aaaaaaaaaatgcattaaaaagttaaactacaacaaacaaaaccctgaaa
tctaaattacctgtctaccagtaggaaatatgagaagcaattataatcat
aacaatggcccagccatgtttaaaaagaccattttaattcagtgtcagtt
ccttcatataacactagcaactaattttcacctttgcttttttttccttt
tgggttatccatgctatgctggtttcccgatggcgacaagcatcctggac
acttccattgggtcctaataaaataataatagctaaccgtgagcacttaa
tctgagccaggcatgctgtcagcagcttcaaatgcattatcttatcaaaa
gataggaggcaacccgaggtttagaataaggaaggatattgttccaggtc
tcacaccaaaaacagggtggctggtgaaactgagcaaatggtgcttcagt
tccttaacatctagacattttttaatagaaaaatagaatttaatagaata
atttttagaaaaaaaatgttttaatattaggtgaaagcaaataattagca
accaaatttggtacactatacaattatcactactctgaaaacaaaaaagg
ataaaattaacatttagtttaattccatcatttataccttttgagtgttg
aaagtactttggtgactttaaggttatttagcatgagaccataggaagca
ataacatttttatattacaacccaatgctcgagagtgcgcgcgtacacac
acacatgcacacacacgcacacgcagtttttaaaggtttcacaaaacaat
accctagctgtatacattctggcattttttgttatcttaattcatttttt
aatgttagtcatgaataactacatcagtctctcaattgaccaacaggtat
gaaaaaacagtgccccaaattattagagagtaaacaatatgttatagaaa
ccggtggctaccctgattcagctttctccagccaatggctgctactgcag
tgatacgtaatcaactttcacgagtttctagctagacatgtaacgctttg
gtttcagaaccaatccgaaaaagtcctcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_63203306_63204456
seq2: B6Ng01-273I22.b_45_1204

seq1  GAATTCCACTTTCATACATGTGTAATCTGATCACGTTCACCTCTCATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTTTCATACATGTGTAATCTGATCACGTTCACCTCTCATTGC  50

seq1  CCTCGGAGCTTCCTTCCCACCCCTCTAAGCTACCTTTGCTCAGACAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGAGCTTCCTTCCCACCCCTCTAAGCTACCTTTGCTCAGACAGGAT  100

seq1  CTTTCTACGTTCATGCTGTCTGGTTTGACTTAGATGTGAAAGTGTACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTACGTTCATGCTGTCTGGTTTGACTTAGATGTGAAAGTGTACTGG  150

seq1  TATGTTAGAGAACCCAGTGTGTCAAAGATTGAACAGTGACATTACAGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAGAGAACCCAGTGTGTCAAAGATTGAACAGTGACATTACAGATG  200

seq1  TGGCTGCTTTTTTTTTTTTAAAAAAGGAAAACGATAGCTGAGAACAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCTTTTTTTTTTTTAAAAAAGGAAAACGATAGCTGAGAACAGTTG  250

seq1  TAACACTCATCTTCAATCCAAGTACTTAGGAGGTAAAGACAGAAAGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTCATCTTCAATCCAAGTACTTAGGAGGTAAAGACAGAAAGTTCT  300

seq1  TCTGCTACACAGAGTTCAAGGCCAGCCTGGGCTACAAGAAACTCAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTACACAGAGTTCAAGGCCAGCCTGGGCTACAAGAAACTCAAAAAT  350

seq1  CAAAATGAAATCCCAAACAGCAGCCTGGAGCACAGCTTACTGCTTCTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAAATCCCAAACAGCAGCCTGGAGCACAGCTTACTGCTTCTCAC  400

seq1  CCAGCTCCTTCAGTGGGGAAGATCTCTTCAGTGCATAAGTTGTCAGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCCTTCAGTGGGGAAGATCTCTTCAGTGCATAAGTTGTCAGAGTC  450

seq1  AACTTTATTAAGCAAGTCTTTCAGAGCTACTAAGGCTTCAGCATCCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATTAAGCAAGTCTTTCAGAGCTACTAAGGCTTCAGCATCCACCA  500

seq1  AGCCTCCTGCAATCGCTGCCACAGCATTGCCTTCAAAATTCTGTAACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCTGCAATCGCTGCCACAGCATTGCCTTCAAAATTCTGTAACTGG  550

seq1  AAACAGAAAAGGGCATCTCTAAGAAACCTACAGTCAGCAAAGACCATGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAAGGGCATCTCTAAGAAACCTACAGTCAGCAAAGACCATGAC  600

seq1  TGTTCAGGAAATAAACCAAGTCATTTTCAAGCATCCAGAGTAGCAGGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGGAAATAAACCAAGTCATTTTCAAGCATCCAGAGTAGCAGGAGG  650

seq1  CACAGCCGTCTCTCCTGAATTAGTGTAGCTACCACTGCACATTAAAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCGTCTCTCCTGAATTAGTGTAGCTACCACTGCACATTAAAGAAG  700

seq1  CTTTTTACAGCAAATGCAGAGGAAAACCACACTGGAAACAATGCAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTACAGCAAATGCAGAGGAAAACCACACTGGAAACAATGCAGAAAT  750

seq1  CAACAAATTGTGGGGACCCCAGCCACAACAGACACATCTACACCATGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATTGTGGGGACCCCAGCCACAACAGACACATCTACACCATGGCT  800

seq1  CTTGCAGCTATTGCTCAAGGAACCAGAAAATAAAGAGTCTAAGAGCCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGCTATTGCTCAAGGAACCAGAAAATAAAGAGTCTAAGAGCCAGC  850

seq1  GTACCAGAAGTCTGCTGTAAAGCAGTGTCTCCTAGAAAGGCTGCATAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAGAAGTCTGCTGTAAAGCAGTGTCTCCTAGAAAGGCTGCATAAAC  900

seq1  AAGATCCGAATACCAATACCAACAGGAATTTTAACATGG-AAGGGAG-AA  948
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  AAGATCCGAATACCAATACCAACAGGAATTTTAACATGGAAAGGGAGAAA  950

seq1  AATTCCAC-AGGTCTCACCTCTAG-ACAAAGAACTGCAAGCAACTGACTG  996
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  AATTCCACAAGGTCTCACCTCTAGAACAAAGAACTGCAAGCAACTGACTG  1000

seq1  CTGGGAG-AAAAAGAATTAGCTTC-TCTCAGGAATGAACCCCCA--TATA  1042
      ||||||| ||||||| |||||||| ||||| |||||||||||||   |||
seq2  CTGGGAGAAAAAAGATTTAGCTTCTTCTCA-GAATGAACCCCCAATAATA  1049

seq1  GGTTGTCCAGTACAGAGCAGTCAGTCAGCCTTGAAATCATATATACACAA  1092
      |||||||||||||||||||||||||||| ||||||||||||||||||| |
seq2  GGTTGTCCAGTACAGAGCAGTCAGTCAG-CTTGAAATCATATATACAC-A  1097

seq1  ACAATAAAAATGTAGAGTCTATTTGTG-CATGTACATAAA-TTTATATAT  1140
      ||||||||||||||||||||| ||||| |||||||||||| ||||   ||
seq2  ACAATAAAAATGTAGAGTCTAATTGTGCCATGTACATAAACTTTAATAAT  1147

seq1  TTAC--TATATAT  1151
      ||||   ||||||
seq2  TTACCTAATATAT  1160

seq1: chr1_63320849_63321983
seq2: B6Ng01-273I22.g_67_1196 (reverse)

seq1  TCGAGGACTTTTTCTGTATGG-TCTGAAACCAAAGCGTTACATG-CTAGC  48
      |||||||||||||| |  ||| |||||||||||||||||||||| |||||
seq2  TCGAGGACTTTTTCGGATTGGTTCTGAAACCAAAGCGTTACATGTCTAGC  50

seq1  TAGAAACTCGTTGAAAATTTGATTACGTATCACTGCAGTAGCCAGCCCAT  98
      |||||||||||   ||| ||||||||||||||||||||||| ||| ||||
seq2  TAGAAACTCGT--GAAAGTTGATTACGTATCACTGCAGTAG-CAG-CCAT  96

seq1  TGGCTGGAAGAAAGCTGAAATCAGGGTAGCAACCGGTTTCTATAACATAT  148
      ||||||| ||||||||| |||||||||||| |||||||||||||||||||
seq2  TGGCTGG-AGAAAGCTG-AATCAGGGTAGCCACCGGTTTCTATAACATAT  144

seq1  TGTTTACTCTTCCTAATAATTTGGGGCACTG-TTTTTCATACCTGTTGGT  197
      ||||||||||  ||||||||||||||||||| ||||||||||||||||||
seq2  TGTTTACTCT--CTAATAATTTGGGGCACTGTTTTTTCATACCTGTTGGT  192

seq1  CAATTGAGAGACTGATGTAGTTATTCATGACTAACATTAAAAAATGAATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGAGAGACTGATGTAGTTATTCATGACTAACATTAAAAAATGAATT  242

seq1  AAGATAACAAAAAATGCCAGAATGTATACAGCTAGGGTATTGTTTTGTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAACAAAAAATGCCAGAATGTATACAGCTAGGGTATTGTTTTGTGA  292

seq1  AACCTTTAAAAACTGCGTGTGCGTGTGTGTGCATGTGTGTGTGTACGCGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTAAAAACTGCGTGTGCGTGTGTGTGCATGTGTGTGTGTACGCGC  342

seq1  GCACTCTCGAGCATTGGGTTGTAATATAAAAATGTTATTGCTTCCTATGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTCGAGCATTGGGTTGTAATATAAAAATGTTATTGCTTCCTATGG  392

seq1  TCTCATGCTAAATAACCTTAAAGTCACCAAAGTACTTTCAACACTCAAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCTAAATAACCTTAAAGTCACCAAAGTACTTTCAACACTCAAAA  442

seq1  GGTATAAATGATGGAATTAAACTAAATGTTAATTTTATCCTTTTTTGTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAATGATGGAATTAAACTAAATGTTAATTTTATCCTTTTTTGTTT  492

seq1  TCAGAGTAGTGATAATTGTATAGTGTACCAAATTTGGTTGCTAATTATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTAGTGATAATTGTATAGTGTACCAAATTTGGTTGCTAATTATTT  542

seq1  GCTTTCACCTAATATTAAAACATTTTTTTTCTAAAAATTATTCTATTAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCACCTAATATTAAAACATTTTTTTTCTAAAAATTATTCTATTAAA  592

seq1  TTCTATTTTTCTATTAAAAAATGTCTAGATGTTAAGGAACTGAAGCACCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTTTTCTATTAAAAAATGTCTAGATGTTAAGGAACTGAAGCACCA  642

seq1  TTTGCTCAGTTTCACCAGCCACCCTGTTTTTGGTGTGAGACCTGGAACAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCAGTTTCACCAGCCACCCTGTTTTTGGTGTGAGACCTGGAACAA  692

seq1  TATCCTTCCTTATTCTAAACCTCGGGTTGCCTCCTATCTTTTGATAAGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTTCCTTATTCTAAACCTCGGGTTGCCTCCTATCTTTTGATAAGAT  742

seq1  AATGCATTTGAAGCTGCTGACAGCATGCCTGGCTCAGATTAAGTGCTCAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATTTGAAGCTGCTGACAGCATGCCTGGCTCAGATTAAGTGCTCAC  792

seq1  GGTTAGCTATTATTATTTTATTAGGACCCAATGGAAGTGTCCAGGATGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGCTATTATTATTTTATTAGGACCCAATGGAAGTGTCCAGGATGCT  842

seq1  TGTCGCCATCGGGAAACCAGCATAGCATGGATAACCCAAAAGGAAAAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCCATCGGGAAACCAGCATAGCATGGATAACCCAAAAGGAAAAAAA  892

seq1  AGCAAAGGTGAAAATTAGTTGCTAGTGTTATATGAAGGAACTGACACTGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGGTGAAAATTAGTTGCTAGTGTTATATGAAGGAACTGACACTGA  942

seq1  ATTAAAATGGTCTTTTTAAACATGGCTGGGCCATTGTTATGATTATAATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATGGTCTTTTTAAACATGGCTGGGCCATTGTTATGATTATAATT  992

seq1  GCTTCTCATATTTCCTACTGGTAGACAGGTAATTTAGATTTCAGGGTTTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCATATTTCCTACTGGTAGACAGGTAATTTAGATTTCAGGGTTTT  1042

seq1  GTTTGTTGTAGTTTAACTTTTTAATGCATTTTTTTTTTTAATTTTTGAGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGTAGTTTAACTTTTTAATGCATTTTTTTTTTTAATTTTTGAGA  1092

seq1  CAGGGTCTCAATATTCAGTCCAGGCAGCCTGTGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTCTCAATATTCAGTCCAGGCAGCCTGTGAATTC  1130