BAC Information

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BAC

Clone NameB6Ng01-274A22
Chromosome1 (Build37)
Map Location 158,700,140 - 158,813,769
singlet/doubletdoublet
Overlap geneLOC433368, Ralgps2, Angptl1
Upstream geneCep350, LOC676894, Tor1aip1, Ifrg15, Tor1aip2, A230106N23Rik, Tdrd5, Nphs2, 9430070O13Rik, LOC100038991, Soat1, LOC100039026, Abl2, Tor3a, C530043G21Rik
Downstream gene4930439D14Rik, 1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik, BC026585, Lztr2, LOC664935, LOC100039217
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274A22.bB6Ng01-274A22.g
ACCGA075460GA075461
length1,1771,111
definitionB6Ng01-274A22.b B6Ng01-274A22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(158,700,140 - 158,701,321)(158,812,630 - 158,813,769)
sequence
gaattctggtgttaagtaaaaacatcagggaaacctggcagtgactcaga
cgaaatgagaattaggaaaacagaagaatctccaagtcttcccgagtggg
ataagccagcggcccaagccttggaagcctctggaaagcgcctctggcag
caggcagcaggcagcaggcagcccacaccacctgcccagcttgggaagcg
tcctctgcccgtggttcatgttagagacgctaactgatgcgtacaacagg
ctctagatgcttccatctgaaaggaaacgccgcgtactcaacaggtcaaa
tgcaaactttccctagccccatgcacatcagaatttccaggaccattaca
caccagggagaacagaaaccaggctgctgaggaggctcagtcatcccaac
gccaagtgctccccaggactagtcctcctccccaattctgccgctgcttc
ccgagttcaaagctattgttcaggagactcacaaaggacttccatgacct
tcctgcatacacgctgcccgtccttaaggcaccaggagactttctaaaaa
caaggtgggccctttttcctctcagtgtgtgctggagggaacagttagaa
accaaagctttgcagggcgtgtccttttgagaggtggtaatactctggtt
gggaggtaggctgggggagatcctttcccacacgacaaaggatgggaaac
aaggggcattgtataggtcagtgtagacaaagcaccaaaggtccctgaag
gttcatggataagaaaagcagatagaagctacagtgtgtttgttgataag
agtacaagccatgaccttgacaaatagccttttgaatctgtcaccagcct
agttgtatccatctccacatcttcccatgtgctcacagatagtcacatat
attcagaatgtccaactttggtttttacggggtgcgtagtaaatgcacat
gtatgtgtttgtgtgtgcacgcttgtatgcccatgtatgcatgcgtgaag
gccatggcagatgtggtgtgtctcgctctagtactctgcatcttaattgt
tcacacaagacagctcattgagcctgggacttgctgcctcagtagccgct
gataggtgaactccagtctgctgttttcttacacctccctcatcctgtgc
ggaagcgaactttccacgccacatttt
gaattcactctgtagaccaggctggcctggaactcagagatccacccgtc
tctgccttttgctaggattaaaggcgtgcaccgacttgctaggcagatta
gtacgtcttaatggtcttgtgctaaagacattatttactctataaactca
gttattcatttttgtcttttaagacagtgtctttctatgtagcccagact
ggccttggatgtgtgtgatcctcttgccttggccctttgtgcactaggat
tctaggtgaattattactatacccagaaaaagctttttttttaaaactat
cattgtgtgtgtgcacatacttttttttgcacgtttatgtgttaatgtgt
gtgcattagaaacaaaggatatcctctgagtgttattattgagaagctat
ctaccttctttttctgagataagaatgctcattaacctggaactcaatca
attagtctatgtaggctagcccttgagctccagggattcttttgtctcca
ctttcaccttcccacctccctacctctcaccttccacctccccacctctc
atctccccacatcctcacctcttaccttccacctccccacttcccacctc
ttaccttccacccctcacctccccacctctcaggactgggattactcaat
ttagggcctgtgcattcagtgcaagttctttacttggtgtctaaagatag
gttttacataaaaggtagtttttatattgaaaagtattagtgtggaagag
cttacaatcattatttttctattataaacatccgaagaaaggatttttct
accttaaaaattctttttaattatgacggtctcatactttaaaatctgaa
ttccacggatggggtggaaatgactgctagtacacagtcaagagttctgt
cttgctccgccatcttccttctgagccattagagactgctaagggctcta
gagtgctctcaagcagaccttgggatccccttgggatcactggtagtgat
gcacatcagctcaagaattgcggaggtctgtgcagcagaaacaggacaga
ccgctgacagagctggatcattcaggtcggccaggcccgccatctttctg
catgacctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_158700140_158701321
seq2: B6Ng01-274A22.b_33_1209

seq1  GAATTCTGGTGTTAAGTAAAAACATCAGGGAAACCTGGCAGTGACTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTGTTAAGTAAAAACATCAGGGAAACCTGGCAGTGACTCAGA  50

seq1  CGAAATGAGAATTAGGAAAACAGAAGAATCTCCAAGTCTTCCCGAGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATGAGAATTAGGAAAACAGAAGAATCTCCAAGTCTTCCCGAGTGGG  100

seq1  ATAAGCCAGCGGCCCAAGCCTTGGAAGCCTCTGGAAAGCGCCTCTGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCAGCGGCCCAAGCCTTGGAAGCCTCTGGAAAGCGCCTCTGGCAG  150

seq1  CAGGCAGCAGGCAGCAGGCAGCCCACACCACCTGCCCAGCTTGGGAAGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGCAGGCAGCAGGCAGCCCACACCACCTGCCCAGCTTGGGAAGCG  200

seq1  TCCTCTGCCCGTGGTTCATGTTAGAGACGCTAACTGATGCGTACAACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGCCCGTGGTTCATGTTAGAGACGCTAACTGATGCGTACAACAGG  250

seq1  CTCTAGATGCTTCCATCTGAAAGGAAACGCCGCGTACTCAACAGGTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGATGCTTCCATCTGAAAGGAAACGCCGCGTACTCAACAGGTCAAA  300

seq1  TGCAAACTTTCCCTAGCCCCATGCACATCAGAATTTCCAGGACCATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTTTCCCTAGCCCCATGCACATCAGAATTTCCAGGACCATTACA  350

seq1  CACCAGGGAGAACAGAAACCAGGCTGCTGAGGAGGCTCAGTCATCCCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGGAGAACAGAAACCAGGCTGCTGAGGAGGCTCAGTCATCCCAAC  400

seq1  GCCAAGTGCTCCCCAGGACTAGTCCTCCTCCCCAATTCTGCCGCTGCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTGCTCCCCAGGACTAGTCCTCCTCCCCAATTCTGCCGCTGCTTC  450

seq1  CCGAGTTCAAAGCTATTGTTCAGGAGACTCACAAAGGACTTCCATGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTTCAAAGCTATTGTTCAGGAGACTCACAAAGGACTTCCATGACCT  500

seq1  TCCTGCATACACGCTGCCCGTCCTTAAGGCACCAGGAGACTTTCTAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATACACGCTGCCCGTCCTTAAGGCACCAGGAGACTTTCTAAAAA  550

seq1  CAAGGTGGGCCCTTTTTCCTCTCAGTGTGTGCTGGAGGGAACAGTTAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGGGCCCTTTTTCCTCTCAGTGTGTGCTGGAGGGAACAGTTAGAA  600

seq1  ACCAAAGCTTTGCAGGGCGTGTCCTTTTGAGAGGTGGTAATACTCTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGCTTTGCAGGGCGTGTCCTTTTGAGAGGTGGTAATACTCTGGTT  650

seq1  GGGAGGTAGGCTGGGGGAGATCCTTTCCCACACGACAAAGGATGGGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTAGGCTGGGGGAGATCCTTTCCCACACGACAAAGGATGGGAAAC  700

seq1  AAGGGGCATTGTATAGGTCAGTGTAGACAAAGCACCAAAGGTCCCTGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGCATTGTATAGGTCAGTGTAGACAAAGCACCAAAGGTCCCTGAAG  750

seq1  GTTCATGGATAAGAAAAGCAGATAGAAGCTACAGTGTGTTTGTTGATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGGATAAGAAAAGCAGATAGAAGCTACAGTGTGTTTGTTGATAAG  800

seq1  AGTACAAGCCATGACCTTGACAAATAGCCTTTTGAATCTGTCACCAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAGCCATGACCTTGACAAATAGCCTTTTGAATCTGTCACCAGCCT  850

seq1  AGTTGTATCCATCTCCACATCTTCCCATGTGCTCACAGATAGTCACATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTATCCATCTCCACATCTTCCCATGTGCTCACAGATAGTCACATAT  900

seq1  ATTCAGAATGTCCAACTTTGGTTTTTACGGGGTGCGTAGTAAATGCACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAATGTCCAACTTTGGTTTTTACGGGGTGCGTAGTAAATGCACAT  950

seq1  GTATGTGTTTGTGTGTGCACGCTTGTATGCCCATGTATGCATGCGTGAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTTTGTGTGTGCACGCTTGTATGCCCATGTATGCATGCGTGAAG  1000

seq1  GCCATGGCAGATGTGGTGTGTCTCGCTCTAGTACTCTGCATCTTAATTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGCAGATGTGGTGTGTCTCGCTCTAGTACTCTGCATCTTAATTGT  1050

seq1  TCACACAAGACAGCTCATTGAGCCTGGAACTTGCTGCTTCAGTTAGCCCG  1100
      ||||||||||||||||||||||||||| ||||||||| |||| |||||  
seq2  TCACACAAGACAGCTCATTGAGCCTGGGACTTGCTGCCTCAG-TAGCC--  1097

seq1  GCTGGCCAGTGAACCTTCAAGGTCTGCCTGTTTC-TACACCT-CCTCATC  1148
      ||||    ||||||  || | ||||||   |||| ||||||| |||||||
seq2  GCTGATAGGTGAAC--TCCA-GTCTGCTGTTTTCTTACACCTCCCTCATC  1144

seq1  CTGGTGCCGGAGCGACACTTT-CACGCCACATTTT  1182
      || |||| | ||||| ||||| |||||||||||||
seq2  CT-GTGCGGAAGCGA-ACTTTCCACGCCACATTTT  1177

seq1: chr1_158812630_158813769
seq2: B6Ng01-274A22.g_63_1173 (reverse)

seq1  GCTAGGGGGTTCATGCAG-AAGATGGCGGGGCTGGCCCCGACCTGAATGG  49
      ||||||    |||||||| ||||||||||| ||||  ||||||||||| |
seq2  GCTAGG----TCATGCAGAAAGATGGCGGGCCTGG--CCGACCTGAAT-G  43

seq1  ATCCCAGCCTCTGGTCAGGCGGGGTTCCTTTGTCCCTGTTTCTGCTGGCA  99
      || |||| |||| |||| ||||      | ||| |||||||||||| |||
seq2  AT-CCAG-CTCT-GTCA-GCGG------TCTGT-CCTGTTTCTGCT-GCA  81

seq1  CAAGACCCTCCGCAATTCTTTGGAGCTGATGTTGCATTCCACTTACCAGT  149
      | ||| ||||||||||||||  ||||||||| |||||  ||| |||||||
seq2  C-AGA-CCTCCGCAATTCTT--GAGCTGATG-TGCAT--CAC-TACCAGT  123

seq1  GATCCCAAGGGGATCCCAAGGTCCTGCTTGGAGAGCACTCTAGAGCCCTT  199
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  GATCCCAAGGGGATCCCAAGGT-CTGCTT-GAGAGCACTCTAGAGCCCTT  171

seq1  AGCAGTCTCTAATGGGCTCAGAAGGAAGATGGCGGAGCAAGACAGAACTC  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCTCTAAT-GGCTCAGAAGGAAGATGGCGGAGCAAGACAGAACTC  220

seq1  TTGACTGTGTACTAGCAGTCATTTCCACCCCATCCGTGGAATTCAGATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGTGTACTAGCAGTCATTTCCACCCCATCCGTGGAATTCAGATTT  270

seq1  TAAAGTATGAGACCGTCATAATTAAAAAGAATTTTTAAGGTAGAAAAATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTATGAGACCGTCATAATTAAAAAGAATTTTTAAGGTAGAAAAATC  320

seq1  CTTTCTTCGGATGTTTATAATAGAAAAATAATGATTGTAAGCTCTTCCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCGGATGTTTATAATAGAAAAATAATGATTGTAAGCTCTTCCAC  370

seq1  ACTAATACTTTTCAATATAAAAACTACCTTTTATGTAAAACCTATCTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATACTTTTCAATATAAAAACTACCTTTTATGTAAAACCTATCTTTA  420

seq1  GACACCAAGTAAAGAACTTGCACTGAATGCACAGGCCCTAAATTGAGTAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAAGTAAAGAACTTGCACTGAATGCACAGGCCCTAAATTGAGTAA  470

seq1  TCCCAGTCCTGAGAGGTGGGGAGGTGAGGGGTGGAAGGTAAGAGGTGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTCCTGAGAGGTGGGGAGGTGAGGGGTGGAAGGTAAGAGGTGGGA  520

seq1  AGTGGGGAGGTGGAAGGTAAGAGGTGAGGATGTGGGGAGATGAGAGGTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGAGGTGGAAGGTAAGAGGTGAGGATGTGGGGAGATGAGAGGTGG  570

seq1  GGAGGTGGAAGGTGAGAGGTAGGGAGGTGGGAAGGTGAAAGTGGAGACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGGAAGGTGAGAGGTAGGGAGGTGGGAAGGTGAAAGTGGAGACAA  620

seq1  AAGAATCCCTGGAGCTCAAGGGCTAGCCTACATAGACTAATTGATTGAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCCCTGGAGCTCAAGGGCTAGCCTACATAGACTAATTGATTGAGT  670

seq1  TCCAGGTTAATGAGCATTCTTATCTCAGAAAAAGAAGGTAGATAGCTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTAATGAGCATTCTTATCTCAGAAAAAGAAGGTAGATAGCTTCT  720

seq1  CAATAATAACACTCAGAGGATATCCTTTGTTTCTAATGCACACACATTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATAACACTCAGAGGATATCCTTTGTTTCTAATGCACACACATTAA  770

seq1  CACATAAACGTGCAAAAAAAAGTATGTGCACACACACAATGATAGTTTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAACGTGCAAAAAAAAGTATGTGCACACACACAATGATAGTTTTA  820

seq1  AAAAAAAAGCTTTTTCTGGGTATAGTAATAATTCACCTAGAATCCTAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGCTTTTTCTGGGTATAGTAATAATTCACCTAGAATCCTAGTG  870

seq1  CACAAAGGGCCAAGGCAAGAGGATCACACACATCCAAGGCCAGTCTGGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGGGCCAAGGCAAGAGGATCACACACATCCAAGGCCAGTCTGGGC  920

seq1  TACATAGAAAGACACTGTCTTAAAAGACAAAAATGAATAACTGAGTTTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGAAAGACACTGTCTTAAAAGACAAAAATGAATAACTGAGTTTAT  970

seq1  AGAGTAAATAATGTCTTTAGCACAAGACCATTAAGACGTACTAATCTGCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAATAATGTCTTTAGCACAAGACCATTAAGACGTACTAATCTGCC  1020

seq1  TAGCAAGTCGGTGCACGCCTTTAATCCTAGCAAAAGGCAGAGACGGGTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGTCGGTGCACGCCTTTAATCCTAGCAAAAGGCAGAGACGGGTGG  1070

seq1  ATCTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTGAATTC  1111