BAC Information

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BAC

Clone NameB6Ng01-274E01
Chromosome1 (Build37)
Map Location 102,190,446 - 102,191,067
singlet/doubletsinglet
Overlap geneC230078M14Rik
Upstream geneLOC633295, EG666200
Downstream geneLOC100041909
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274E01.bB6Ng01-274E01.g
ACCGA075605GA075606
length9951,180
definitionB6Ng01-274E01.b B6Ng01-274E01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttattagatagaaagcataaataacacttattttattttattct
taattttattgagatagtatctcaggtagtttaagctggcttcaagttca
ctgtagaacaaaagataacattaactttggacctttctgaatatagcact
caagttctgtaacattttaataaaaactcatattttctatgtcaatatac
aataatcatgacagtaatttttaatttggcatcaaaaataaagtgtttta
ttataaaatttgtatgttatttcactctgctcatatttttctcaattata
ttctgttctcttctctatttccttcctctggtccttttaattcaccacat
aatcctcctttgacttctatacatgcaccacaaatatgcatctatatatg
catatatacatatatatactatatatgcatatatagatattaaaattaca
tataattatattcttgatgcaacacatgagaaagggcatgatacactatt
tctcttttctagtctgttttatttcacctaacataatggtctctagttgt
atctatcttcataaaaatggcataattttgttctgcatggctgagtaaaa
caccattatgtatgtactgatcttttctttatccatttatttgttgacgg
gaagctaagctattttcatatcttggcttcagtaaataatatggcagtag
gcatggaggtgcaagtatcttcaatgggctacattagatattttaggtat
gtactcatagtgcatagtacatagcttgatgaaagctctaattacttttc
tttaagaatctccatattagtttccatagtatctgaaccactttatattt
ctatcattgctcccctggtccttgccagcatttgccatttcctttaaaac
aggcactctcatagctataatttcaatttgtattttctggtgactatgag
tactaaatatgtttttaaatatttactggttattaatccttcttt

gaattctcacctgaggaataccaaatggccaagaagcacctgaaaaatgt
tcagcattcttaatcatcagggaaatgcaaatcaaatcaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagca
gattctggcaaggatgtggagaaagaggaacactcctccattgttggtgg
gattgcaagctagtaacttgtaactactctggaattcagtctggtggttc
ctcaaaaaattggacatagtactacaggaggatcctgcaatacctctcct
gggcatatatctagaagatgatccacccggtaagaaggacacatgctcca
ctatgttcatagcagccttatttataatagccagaagctggaaagaaccc
agatgcccttcaacagaggaatggatacagaaaatgtggtacatttacac
aatggagtactattcagctattaaaaagaatgaatttatgaaattcttag
gcaaatggatggacctggagggcatcatcctgagttaggtaactcaatca
caaaataactcacatgatatgtactcactgataagtggatattagcctag
aaacttagaaaacccaagatataagatgcaatgtgtgaaacatatgaagc
tcaggaagaaagaagaccaaggtgtacatactttgccccttcttggaatt
gggaggaaggcacccatggaaggagctacaaagacagagtttagagctta
gaagaaaggatggactatctagagactgccatacctgggatccatcccat
aatcagcctccaaacgctaacaccatttcatacactagcaagattttgct
gaaaggaccctgatatagatgtctcttctgagactatgcccagggcctag
caaacacagaagggatgctcacaatcagctattggatggatcacagggcc
cccaatgggaggaagtatccagggagctggggggatctgccatcctatag
atggacacatatgactaaccagtaccccccagagctcgtgtctctagctg
catatgtatcagaagatgcctggtaggccatcagtggaagagagctcatt
gtcatgcagaactttatatattcagtcagtgaacccagtcaaaagtagga
tgggtgttgtgaaagcttcgtctacccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102190446_102191067
seq2: B6Ng01-274E01.b_43_664 (reverse)

seq1  GATCAGTACATACATAATGGTGTTTTACTCAGCCATGCAGAACAAAATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTACATACATAATGGTGTTTTACTCAGCCATGCAGAACAAAATTA  50

seq1  TGCCATTTTTATGAAGATAGATACAACTAGAGACCATTATGTTAGGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTTTTATGAAGATAGATACAACTAGAGACCATTATGTTAGGTGAA  100

seq1  ATAAAACAGACTAGAAAAGAGAAATAGTGTATCATGCCCTTTCTCATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAGACTAGAAAAGAGAAATAGTGTATCATGCCCTTTCTCATGTG  150

seq1  TTGCATCAAGAATATAATTATATGTAATTTTAATATCTATATATGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCAAGAATATAATTATATGTAATTTTAATATCTATATATGCATAT  200

seq1  ATAGTATATATATGTATATATGCATATATAGATGCATATTTGTGGTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATATATATGTATATATGCATATATAGATGCATATTTGTGGTGCAT  250

seq1  GTATAGAAGTCAAAGGAGGATTATGTGGTGAATTAAAAGGACCAGAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGAAGTCAAAGGAGGATTATGTGGTGAATTAAAAGGACCAGAGGAA  300

seq1  GGAAATAGAGAAGAGAACAGAATATAATTGAGAAAAATATGAGCAGAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAGAGAAGAGAACAGAATATAATTGAGAAAAATATGAGCAGAGTG  350

seq1  AAATAACATACAAATTTTATAATAAAACACTTTATTTTTGATGCCAAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAACATACAAATTTTATAATAAAACACTTTATTTTTGATGCCAAATT  400

seq1  AAAAATTACTGTCATGATTATTGTATATTGACATAGAAAATATGAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTACTGTCATGATTATTGTATATTGACATAGAAAATATGAGTTTT  450

seq1  TATTAAAATGTTACAGAACTTGAGTGCTATATTCAGAAAGGTCCAAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATGTTACAGAACTTGAGTGCTATATTCAGAAAGGTCCAAAGTT  500

seq1  AATGTTATCTTTTGTTCTACAGTGAACTTGAAGCCAGCTTAAACTACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATCTTTTGTTCTACAGTGAACTTGAAGCCAGCTTAAACTACCTG  550

seq1  AGATACTATCTCAATAAAATTAAGAATAAAATAAAATAAGTGTTATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTATCTCAATAAAATTAAGAATAAAATAAAATAAGTGTTATTTAT  600

seq1  GCTTTCTATCTAATAAGAATTC  622
      ||||||||||||||||||||||
seq2  GCTTTCTATCTAATAAGAATTC  622


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