BAC Information

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BAC

Clone NameB6Ng01-274K08
Chromosome1 (Build37)
Map Location 29,878,966 - 29,879,770
singlet/doubletsinglet
Overlap genenone
Upstream geneEG623924, EG433283, LOC100040665
Downstream geneLOC665944, EG624138, LOC100040699, Phf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274K08.bB6Ng01-274K08.g
ACCGA075894GA075895
length8051,173
definitionB6Ng01-274K08.b B6Ng01-274K08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaatacctactttttatgtttatacagtagattacattgatgca
tttctatgtattgaaagatgaacacatgtcttttattagcattgcctcac
atatttttgaagaaataataacataattcttaaaaagaagaactaaggag
gacacacatgggcactaataatcttcccaaggcccaaaacatcccaaggt
atactcttaagcagtttcggatacctacaaaagaagtaggcaaaaattat
aaatttatatcaaattttagaaaattaaaacaactatatcctcttattga
caataatgatgctatttaaagaacaaattgatattaataaatgctataac
ttatctaaaagtttcatgaacatattgtttcattgatttatttttttcat
gcactgtggaccccattttgtgtaatggtttttgtgacaagtatcatctg
tgagtaatgtctgcccagttgtctgaagtgtgaagccagggtgaatctgg
ctttgaatctcttttaattctcctatctccagtcattgaaaattcagctt
ttacaggctttatgtgatgaggttcaatcacctctctaaatctctccttg
atacattgtacatgatatctcattatattcctgggaatcactaacacaag
aaaggaaaagttactttaagaagaaagtcagtttctatttcactcttttg
ttcctaacacatgaggattcagaaaataacaaatttgaagatctaaggtg
aaaggttttggcaacagtcagagtcccatgtccccttccttccttccttc
cttcc

gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
tacgaggtaagcctggccttgaactttctaaggaaattcaagacagtcta
tcagaagtaaagtggaaaatgtttggccttgaattttttctagtgttaga
agcccttttgttccttttcacatgttatcaagtggttaaggcagggagga
ttctagaggaaattcaggacaagctatcagaagtaaagtggggagagaga
gtaggaacaaagaggaaatatggtacacaaaataagtatacaggcctttc
caagggtcttgaacccgaggaaaagttaaggttaggtaggaatacctgga
gagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaatta
gcggaggtctctaggaaaaggagcctgtgctcatcgctggatgggctcgg
ggagccagctcttggtagctctgaatcagatgatgaattctcctctgaag
aaacagactgggaggaagaagcagctcattatgagaaaaaagggtaccag
ccaggtaaagtgctagctaatcagttaaggaagccaaaagcggctggcga
aggccagtttgctgattggcctcagggcagtcggcttcaaggtccgccct
atgcggagtccccgccctgcgtagtgcgtcagccctgcgcagagagacaa
tgtgcagagaggcagtgcgcagactcattcattcccagagaggaacaaag
gaaaatacaacaggcatttccggtctttgaaggagccgagggtgggcgtg
tccacgctccggtagaatacttacaaattaaagaacttgccgagtcggtc
cgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggct
tgccggcatgtcactaactcctgccgactggcaaacggttgtaaaagccg
ctctccctagtatgggcaaatatatggaaatggagagctctttggcatga
aactgcacaagcgcaggcccgagcaaacgcagctgctttgactcagagca
gaagagattgggacttttgactgtaacggtcaggaagcttattctgctga
tcaaacaaactaacattgggagctatgccaagttctccacggctattacg
acctggcaaagggcgcttctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_29878966_29879770
seq2: B6Ng01-274K08.b_44_848

seq1  GAATTCTAATACCTACTTTTTATGTTTATACAGTAGATTACATTGATGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATACCTACTTTTTATGTTTATACAGTAGATTACATTGATGCA  50

seq1  TTTCTATGTATTGAAAGATGAACACATGTCTTTTATTAGCATTGCCTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATGTATTGAAAGATGAACACATGTCTTTTATTAGCATTGCCTCAC  100

seq1  ATATTTTTGAAGAAATAATAACATAATTCTTAAAAAGAAGAACTAAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTGAAGAAATAATAACATAATTCTTAAAAAGAAGAACTAAGGAG  150

seq1  GACACACATGGGCACTAATAATCTTCCCAAGGCCCAAAACATCCCAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACATGGGCACTAATAATCTTCCCAAGGCCCAAAACATCCCAAGGT  200

seq1  ATACTCTTAAGCAGTTTCGGATACCTACAAAAGAAGTAGGCAAAAATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTAAGCAGTTTCGGATACCTACAAAAGAAGTAGGCAAAAATTAT  250

seq1  AAATTTATATCAAATTTTAGAAAATTAAAACAACTATATCCTCTTATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTATATCAAATTTTAGAAAATTAAAACAACTATATCCTCTTATTGA  300

seq1  CAATAATGATGCTATTTAAAGAACAAATTGATATTAATAAATGCTATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATGATGCTATTTAAAGAACAAATTGATATTAATAAATGCTATAAC  350

seq1  TTATCTAAAAGTTTCATGAACATATTGTTTCATTGATTTATTTTTTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAAAAGTTTCATGAACATATTGTTTCATTGATTTATTTTTTTCAT  400

seq1  GCACTGTGGACCCCATTTTGTGTAATGGTTTTTGTGACAAGTATCATCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTGGACCCCATTTTGTGTAATGGTTTTTGTGACAAGTATCATCTG  450

seq1  TGAGTAATGTCTGCCCAGTTGTCTGAAGTGTGAAGCCAGGGTGAATCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATGTCTGCCCAGTTGTCTGAAGTGTGAAGCCAGGGTGAATCTGG  500

seq1  CTTTGAATCTCTTTTAATTCTCCTATCTCCAGTCATTGAAAATTCAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATCTCTTTTAATTCTCCTATCTCCAGTCATTGAAAATTCAGCTT  550

seq1  TTACAGGCTTTATGTGATGAGGTTCAATCACCTCTCTAAATCTCTCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGCTTTATGTGATGAGGTTCAATCACCTCTCTAAATCTCTCCTTG  600

seq1  ATACATTGTACATGATATCTCATTATATTCCTGGGAATCACTAACACAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTGTACATGATATCTCATTATATTCCTGGGAATCACTAACACAAG  650

seq1  AAAGGAAAAGTTACTTTAAGAAGAAAGTCAGTTTCTATTTCACTCTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAAGTTACTTTAAGAAGAAAGTCAGTTTCTATTTCACTCTTTTG  700

seq1  TTCCTAACACATGAGGATTCAGAAAATAACAAATTTGAAGATCTAAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAACACATGAGGATTCAGAAAATAACAAATTTGAAGATCTAAGGTG  750

seq1  AAAGGTTTTGGCAACAGTCAGAGTCCCATGTCCCCTTCCTTCCTTCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTTTGGCAACAGTCAGAGTCCCATGTCCCCTTCCTTCCTTCCTTC  800

seq1  CTTCC  805
      |||||
seq2  CTTCC  805


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