BAC Information

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BAC

Clone NameB6Ng01-274N05
Chromosome1 (Build37)
Map Location 75,738,095 - 75,831,554
singlet/doubletdoublet
Overlap genenone
Upstream geneTtll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274N05.bB6Ng01-274N05.g
ACCGA076024GA076025
length347996
definitionB6Ng01-274N05.b B6Ng01-274N05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,738,095 - 75,738,441)(75,830,563 - 75,831,554)
sequence
caaatgcgagtgactgactttaagcactggtctttgacctggtttgaggg
gtctgaagagagagagagggagaagagaggagaagaggtgggaaggagag
gagagtgctttaagggacaaaaggtgtgggacttctatctacaagttctc
ttccttctgtgaagtttccaaggatggctgtaagagcttggcagtccttt
ggctgtatgcagtatcgcctgacacggagaagccttgacaaatcagtatt
caaagaacaagtgactacactgttgtttggatcttagatgatcccaaagg
ccctatagtaaagccttactccacagggtggcgctatgggggtggta
gaattcactccagtctcttagttcccattaaaacttttcttttggcacgt
gattataatgatcttatttcatgggtgtctgactgtgccttttatctatt
acttaatcctagactggataactcttgagagaaaagatcttgtcttctaa
cttctctttccaggtttaggaaatgagatgagaaaacataaccacaggac
ccgcacaatgtctggcaactagtatgtgctcaataaatgtcagatcctct
cccccttacacatcactgcaaccccaagagcactttgcaaaatctcttga
atcttggagctatccaataaatgttgaacacatgaatcagtgcatataaa
cgggagtgttcggctgctttcctaaggtcaatgagggcatttcagtcgtt
ttcattttcctgcctccatttctgagtttgtgggcccataaatatactcc
tgttccctgtctctgaagctgaagcaaggccatggtgcttggggggagtg
gcactctgtcattcagtcatcaatccagaaatgtcagatacagccttgag
gaacacactagacaaaaccatcacaacagtcagacctaccctgaagccag
ttagctaatttcatctttgtaaagaggtaattaaaagaaattttaaaaca
aataatatttaaaaagaaataattaatactgatttctgcgtgcatctcac
cttttttcatggatttttcgaattctcatacttgtacatatatgtatgta
tatgtacatatggccctgtatatcatcacgcttctgggctaacttaaatc
ctcagtttgaactgaataagcacaaagtgacctcatagagttgaatctgt
gagttcttaggagctggataaattctaaatatttctgagaggaaaaggca
gaagagacatgtgtgaaggaaacaaacttgtgtaatttcaataaacttga
aaggtttttcatgcccagtatgttataaaagtgtggttggtgcccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75738095_75738441
seq2: B6Ng01-274N05.b_51_397

seq1  CAAATGCGAGTGACTGACTTTAAGCACTGGTCTTTGACCTGGTTTGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCGAGTGACTGACTTTAAGCACTGGTCTTTGACCTGGTTTGAGGG  50

seq1  GTCTGAAGAGAGAGAGAGGGAGAAGAGAGGAGAAGAGGTGGGAAGGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGAGAGAGAGAGGGAGAAGAGAGGAGAAGAGGTGGGAAGGAGAG  100

seq1  GAGAGTGCTTTAAGGGACAAAAGGTGTGGGACTTCTATCTACAAGTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGCTTTAAGGGACAAAAGGTGTGGGACTTCTATCTACAAGTTCTC  150

seq1  TTCCTTCTGTGAAGTTTCCAAGGATGGCTGTAAGAGCTTGGCAGTCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTGTGAAGTTTCCAAGGATGGCTGTAAGAGCTTGGCAGTCCTTT  200

seq1  GGCTGTATGCAGTATCGCCTGACACGGAGAAGCCTTGACAAATCAGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTATGCAGTATCGCCTGACACGGAGAAGCCTTGACAAATCAGTATT  250

seq1  CAAAGAACAAGTGAGTACACTGTTGTTTGGATCTTAGATGATCCCAAAGG  300
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAAAGAACAAGTGACTACACTGTTGTTTGGATCTTAGATGATCCCAAAGG  300

seq1  CCCAGTAGTAAAGCCTTACTCCACAGGGTGGCGCTATGGGGGTGGTA  347
      |||  ||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATAGTAAAGCCTTACTCCACAGGGTGGCGCTATGGGGGTGGTA  347

seq1: chr1_75830563_75831554
seq2: B6Ng01-274N05.g_67_1062 (reverse)

seq1  CCGGCACCAA-CACAC-TTTAT-ACATACTGGGCATG-AAAACCTTTCAA  46
      | |||||||| ||||| ||||| |||||||||||||| ||||||||||||
seq2  CGGGCACCAACCACACTTTTATAACATACTGGGCATGAAAAACCTTTCAA  50

seq1  GTTTATTGAAATTACACAAGTTTGTTTCCTTCACACATGTCTCTTCTGCC  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGAAATTACACAAGTTTGTTTCCTTCACACATGTCTCTTCTGCC  100

seq1  TTTTCCTCTCAGAAATATTTAGAATTTATCCAGCTCCTAAGAACTCACAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCTCAGAAATATTTAGAATTTATCCAGCTCCTAAGAACTCACAG  150

seq1  ATTCAACTCTATGAGGTCACTTTGTGCTTATTCAGTTCAAACTGAGGATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTCTATGAGGTCACTTTGTGCTTATTCAGTTCAAACTGAGGATT  200

seq1  TAAGTTAGCCCAGAAGCGTGATGATATACAGGGCCATATGTACATATACA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAGCCCAGAAGCGTGATGATATACAGGGCCATATGTACATATACA  250

seq1  TACATATATGTACAAGTATGAGAATTCGAAAAATCCATGAAAAAAGGTGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATGTACAAGTATGAGAATTCGAAAAATCCATGAAAAAAGGTGA  300

seq1  GATGCACGCAGAAATCAGTATTAATTATTTCTTTTTAAATATTATTTGTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACGCAGAAATCAGTATTAATTATTTCTTTTTAAATATTATTTGTT  350

seq1  TTAAAATTTCTTTTAATTACCTCTTTACAAAGATGAAATTAGCTAACTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTTCTTTTAATTACCTCTTTACAAAGATGAAATTAGCTAACTGG  400

seq1  CTTCAGGGTAGGTCTGACTGTTGTGATGGTTTTGTCTAGTGTGTTCCTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGGTAGGTCTGACTGTTGTGATGGTTTTGTCTAGTGTGTTCCTCA  450

seq1  AGGCTGTATCTGACATTTCTGGATTGATGACTGAATGACAGAGTGCCACT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTATCTGACATTTCTGGATTGATGACTGAATGACAGAGTGCCACT  500

seq1  CCCCCCAAGCACCATGGCCTTGCTTCAGCTTCAGAGACAGGGAACAGGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAAGCACCATGGCCTTGCTTCAGCTTCAGAGACAGGGAACAGGAG  550

seq1  TATATTTATGGGCCCACAAACTCAGAAATGGAGGCAGGAAAATGAAAACG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTATGGGCCCACAAACTCAGAAATGGAGGCAGGAAAATGAAAACG  600

seq1  ACTGAAATGCCCTCATTGACCTTAGGAAAGCAGCCGAACACTCCCGTTTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATGCCCTCATTGACCTTAGGAAAGCAGCCGAACACTCCCGTTTA  650

seq1  TATGCACTGATTCATGTGTTCAACATTTATTGGATAGCTCCAAGATTCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACTGATTCATGTGTTCAACATTTATTGGATAGCTCCAAGATTCAA  700

seq1  GAGATTTTGCAAAGTGCTCTTGGGGTTGCAGTGATGTGTAAGGGGGAGAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTGCAAAGTGCTCTTGGGGTTGCAGTGATGTGTAAGGGGGAGAG  750

seq1  GATCTGACATTTATTGAGCACATACTAGTTGCCAGACATTGTGCGGGTCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGACATTTATTGAGCACATACTAGTTGCCAGACATTGTGCGGGTCC  800

seq1  TGTGGTTATGTTTTCTCATCTCATTTCCTAAACCTGGAAAGAGAAGTTAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTATGTTTTCTCATCTCATTTCCTAAACCTGGAAAGAGAAGTTAG  850

seq1  AAGACAAGATCTTTTCTCTCAAGAGTTATCCAGTCTAGGATTAAGTAATA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGATCTTTTCTCTCAAGAGTTATCCAGTCTAGGATTAAGTAATA  900

seq1  GATAAAAGGCACAGTCAGACACCCATGAAATAAGATCATTATAATCACGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAGGCACAGTCAGACACCCATGAAATAAGATCATTATAATCACGT  950

seq1  GCCAAAAGAAAAGTTTTAATGGGAACTAAGAGACTGGAGTGAATTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAAGAAAAGTTTTAATGGGAACTAAGAGACTGGAGTGAATTC  996