BAC Information

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BAC

Clone NameB6Ng01-275D05
Chromosome1 (Build37)
Map Location 107,248,854 - 107,250,020
singlet/doubletsinglet
Overlap geneRnf152
Upstream geneLOC383546, LOC100041134, Cdh20
Downstream geneLOC100041985, Pign, LOC666249, 2310035C23Rik, LOC100042023, Tnfrsf11a, EG635504, Zcchc2, EG435634, Phlpp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275D05.bB6Ng01-275D05.g
ACCGA076304GA076305
length1,0171,158
definitionB6Ng01-275D05.b B6Ng01-275D05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaattccctggcctccattgactgagtttcataggcatgtact
tctaggcctgggtttatgcactgctgaagctctaactgaaggctttttta
aaaaaaaaaatttattaggtattttcctcatttacatttctaatgctatc
ccaaaagtcccccatacccacccccccactcccctacccacccactcccc
cttttggccctggcattcccctgtactggggcatataaagtttgcaagtc
caatgggcctctctttccagtgatggccgactaggccatcttttgataca
tatgtagctagagtcaagagctcaggggtactggttagttcataatgttg
ttgcacctacagggttgcacagctctttagctccttggatactttctcta
gctcctccattgggggccctgtgatccatccaatagctgactgtgagcat
ccacttctgtgtttgctaggccccagcatagtctcacaagagacagctat
atcagggtcctttcagcaaaatcttgctagtgtatgcaatggtgtcagcg
tttggaagctgattatgggatggatccctggatatggtgcatgctaggga
ggcactgtaccaattgagctacatcctcagccttccttgagagattagta
gccataggtattgaacatgaattgttttgatttgaaatttgttcttccta
ttgcaaactgcatagtaatatttgtaattttaaagtatttgtacaagaac
tttggagatgggtttaaaaaagagaaacctaggaaaataatacaattata
ttttatttttaaaataaaattaataaaaaatgaaataaaactttaaaatt
gctttcagcgcccaagatagcaaggccagagtgagagctggagagatggc
tcagtggttaagagcactgactgctcttctggaggtcctgagttcaaatt
tcagcaaccacattgtgactcacaaccatctgtaatgagatcagatgccg
tcttctggtgtgtctga

gaattcacctttctgtatgtacatgtgtgcatgtatgtgcatgtcataat
acacacgtggaggtcagaagacctaggtgttatccatttgtttgagagag
caattctttgtcattctctgctgcatacaccaagcaagctagctggcaca
taagcctccagagattcttgtctctcttatcatttgttgttagaaaactg
ggaacacagatgtgtgctcctacatccagctttacttggtccttgggaat
taatggcaggtccccatgcttgcacggcaagcgctttactcactgagcca
tctccccaatgcattcagcagattctttaagatatttatccttgatttac
tcaaaaactgctcatggaacagcaaataccttccaccccttgagccaggc
cccgtgggacaagagacttgtgtcaccagtataattcagctgttcccagc
tcttcccatttccatgcaaggaaggtcatagagcttatttgggaccagaa
caatgtgacatgcttctgggctggattatggggtagactgagtgatacct
gagccactttcttgagagcagtgattccataagaccaagtttgagcaagc
ctctatcagtttagggcctgagcaactacagcgagcctggcctttctatt
ctgcaagcccaggaaagaaatggtcgggcactggtatgttgaatattcct
cactacagcaaaatcaataacacctcagtactttaaaatgagtgagaaga
aacctacaaaagtctacctgtccccatctgctttctaaatcaggtgacac
aggaatgtagacattattttgaacttgatgcacagctgactgctgaacaa
gaaggtccaggtagaatagtcataaagaatgaaaagaaaatgggcctccc
tacattggtggagcctcagcagccatggaaatccaactgaagagttcaat
gtctgtaaagaaagctacttctgacccagcccagacatttggggaattca
gacattctagagaaaacgacaatcagcagaggtgtgtgagctctcagacg
tgcagccttctcagtcactcaaggtaagacttgcatttctttgtctccta
taatctcttttgaaggggtgatcatgacgttgtctcattcaatcacttac
cccgtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_107248854_107250020
seq2: B6Ng01-275D05.g_64_1221

seq1  GAATTCACCTTTCTGTATGTACATGTGTGCATGTATGTGCATGTCATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTTCTGTATGTACATGTGTGCATGTATGTGCATGTCATAAT  50

seq1  ACACACGTGGAGGTCAGAAGACCTAGGTGTTATCCATTTGTTTGAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGTGGAGGTCAGAAGACCTAGGTGTTATCCATTTGTTTGAGAGAG  100

seq1  CAATTCTTTGTCATTCTCTGCTGCATACACCAAGCAAGCTAGCTGGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTTTGTCATTCTCTGCTGCATACACCAAGCAAGCTAGCTGGCACA  150

seq1  TAAGCCTCCAGAGATTCTTGTCTCTCTTATCATTTGTTGTTAGAAAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTCCAGAGATTCTTGTCTCTCTTATCATTTGTTGTTAGAAAACTG  200

seq1  GGAACACAGATGTGTGCTCCTACATCCAGCTTTACTTGGTCCTTGGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACAGATGTGTGCTCCTACATCCAGCTTTACTTGGTCCTTGGGAAT  250

seq1  TAATGGCAGGTCCCCATGCTTGCACGGCAAGCGCTTTACTCACTGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCAGGTCCCCATGCTTGCACGGCAAGCGCTTTACTCACTGAGCCA  300

seq1  TCTCCCCAATGCATTCAGCAGATTCTTTAAGATATTTATCCTTGATTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCAATGCATTCAGCAGATTCTTTAAGATATTTATCCTTGATTTAC  350

seq1  TCAAAAACTGCTCATGGAACAGCAAATACCTTCCACCCCTTGAGCCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAACTGCTCATGGAACAGCAAATACCTTCCACCCCTTGAGCCAGGC  400

seq1  CCCGTGGGACAAGAGACTTGTGTCACCAGTATAATTCAGCTGTTCCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGGGACAAGAGACTTGTGTCACCAGTATAATTCAGCTGTTCCCAGC  450

seq1  TCTTCCCATTTCCATGCAAGGAAGGTCATAGAGCTTATTTGGGACCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCATTTCCATGCAAGGAAGGTCATAGAGCTTATTTGGGACCAGAA  500

seq1  CAATGTGACATGCTTCTGGGCTGGATTATGGGGTAGACTGAGTGATACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGACATGCTTCTGGGCTGGATTATGGGGTAGACTGAGTGATACCT  550

seq1  GAGCCACTTTCTTGAGAGCAGTGATTCCATAAGACCAAGTTTGAGCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACTTTCTTGAGAGCAGTGATTCCATAAGACCAAGTTTGAGCAAGC  600

seq1  CTCTATCAGTTTAGGGCCTGAGCAACTACAGCGAGCCTGGCCTTTCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCAGTTTAGGGCCTGAGCAACTACAGCGAGCCTGGCCTTTCTATT  650

seq1  CTGCAAGCCCAGGAAAGAAATGGTCGGGCACTGGTATGTTGAATATTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGCCCAGGAAAGAAATGGTCGGGCACTGGTATGTTGAATATTCCT  700

seq1  CACTACAGCAAAATCAATAACACCTCAGTACTTTAAAATGAGTGAGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACAGCAAAATCAATAACACCTCAGTACTTTAAAATGAGTGAGAAGA  750

seq1  AACCTACAAAAGTCTACCTGTCCCCATCTGCTTTCTAAATCAGGTGACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACAAAAGTCTACCTGTCCCCATCTGCTTTCTAAATCAGGTGACAC  800

seq1  AGGAATGTAGACATTATTTTGAACTTGATGCACAGCTGACTGCTGAACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGTAGACATTATTTTGAACTTGATGCACAGCTGACTGCTGAACAA  850

seq1  GAAGGTCCAGGTAGAATAGTCATAAAGAAATGAAAAGAAAAT-GGCCTCC  899
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  GAAGGTCCAGGTAGAATAGTCATAAAG-AATGAAAAGAAAATGGGCCTCC  899

seq1  CTACATTGGTGGAGCCTCAGCAGCCATGGAAATCCAACTGAAGAGTTCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTGGTGGAGCCTCAGCAGCCATGGAAATCCAACTGAAGAGTTCAA  949

seq1  TGTCTGTAAAGAAAAGGCTACTTCTGACCCAGCCCAGACATTTGGGGAAT  999
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  TGTCTGTAAAGAAA--GCTACTTCTGACCCAGCCCAGACATTTGGGGAAT  997

seq1  TCAGAACATTCTAGAGAAAACGACAATCAAGCAGAGGTTGTGTGAGCCTC  1049
      |||| ||||||||||||||||||||||| |||||||| |||||||||   
seq2  TCAG-ACATTCTAGAGAAAACGACAATC-AGCAGAGG-TGTGTGAGC--T  1042

seq1  CTCAGACGTGCAGGCCTTCTCAGTCACTTCCAAGTAAGACCTGCATTTCT  1099
      |||||||||||| |||||||||||||| || | ||||||| |||||||||
seq2  CTCAGACGTGCA-GCCTTCTCAGTCAC-TCAAGGTAAGACTTGCATTTCT  1090

seq1  TTGTCTCCCTATAATCTC-TTTGA--GGGTGATTCATGACCGTTGTCTCT  1146
      |||||| ||||||||||| |||||  |||||| |||||| ||||||||| 
seq2  TTGTCT-CCTATAATCTCTTTTGAAGGGGTGA-TCATGA-CGTTGTCTCA  1137

seq1  ATCCATCACTTACCCCTTGGC  1167
       || |||||||||||| ||||
seq2  TTCAATCACTTACCCCGTGGC  1158


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