BAC Information

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BAC

Clone NameB6Ng01-276B04
Chromosome1 (Build37)4 (Build37)
Map Location 176,312,657 - 176,313,186139,363,436 - 139,364,373
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414
Downstream geneOlfr415, Olfr414, Olfr220, Fmn2, Grem2, Rgs7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276B04.bB6Ng01-276B04.g
ACCGA076942GA076943
length1,029941
definitionB6Ng01-276B04.b B6Ng01-276B04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(176,312,657 - 176,313,186)(139,363,436 - 139,364,373)
sequence
gaattctgcacagtggctgcttctaatagttactcctctttccctgagag
ctatctttaagcctttgatgaaggctgcctctttagtcaaagtcctcgag
aggagggtaaattgacttaattttttgttcttcattttttatattatcct
ttatatctttatattatcctttgtatctttacattttatattatcctttg
tatctttatattttagcttcctttctttttctctttttatatttcttaag
ttacttatttttctgcgcgcgtcttctttttcctttctctctgtttctga
tatgccttcctggtactcctacaaagtcgctgcccttccttaacagctgg
tcccacacaaacccagcaacaactaccagacccactgcgtaagaaagcat
acctctcagagacttaccttaatttctttatacttaccggtaccaccgtt
cctcagctgaagagttctgaatccacgcagttgaatccttctcagcagtc
tgttttgcaggaacctttattaacaccgctccccagctgaagagttctga
atccacgccggatccttctcagcagtctgttttacgggaacctttattaa
ccgctccttccccgcgatgcagttctgaatcctccctgtagtagggggtc
ttcgctcgtgcctgaagatgtttcttgtcccgggttttcggcaccacttc
ttgcgcgcgctcgactcgaccagcaagaacgacgctgcaacaggatcctt
ctgcacacgtttattgggagagcttgattgcagaggcgaaaaagacttcg
agcccagaactgatgctgcttttataggcctaggaggggcgtgtctcaca
cccggattggttatgcactaagcctcatttgcatgttcctcatctgattg
gctactctctctcagtacccttacagaacctcattatcatacctcatttg
catgtctcacatctgattggttatactctcagtaccttacagaacctcat
tattcatacctcattgcatgtctcacatc
gaattcccgccgattattcccgcgggtgcagatgtacattaatgcaggag
cgaagtggggggacgcagctttgcgcccagccagagagaaacggctagca
gttccttttaacaagccgttgtctggcttgatcttgtcactctgaagagg
gccattgagaggcattcaagcattggccctggggggacaaaagggctcag
tatatatactgactgctcagttgcctgcaggctcgggggcttttgtctaa
ccttcccttaataaactttttggaagagttcatcagcccacttcaatggc
tgatgttctcattttcaaggagagaggaaaacagcagaaggctggcgtct
tttttttttaaagggagcattctcaataagagggggaagggggaaaggga
gaaagagcctgagactgcagacaccccactttaaagggaaaaagaacaca
tcgcaggtcctaaaaggggacccagacaaaacgactattcatcgcctgga
tgctgttttccccggcccctgagcggaccggagaggcagggaggccatct
ctggactctgcaggcctcttccagcagtgatttgcagacctgagaggttt
aggcgcctctgcagcaggcagtgtttaaaagtgaagtgagccggggccta
gcaaacacagaagtggatgatcacagtcagctattggatggatcacacgg
cccccaatggagaagctagagaaattacccaaggagctaaagggaactgc
aaccctataggtggaacaacaatatgaactaaccagtacccgggagctct
tgtcttttagctgcatatgtatcaaaagatggcctagtcagccatcgctg
caagagaggcccatttggacttgcaactttatatgcctcagtacaaggga
acgccagggccaaaaagggggagtggggtggggttaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176312657_176313186
seq2: B6Ng01-276B04.b_47_576

seq1  GAATTCTGCACAGTGGCTGCTTCTAATAGTTACTCCTCTTTCCCTGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCACAGTGGCTGCTTCTAATAGTTACTCCTCTTTCCCTGAGAG  50

seq1  CTATCTTTAAGCCTTTGATGAAGGCTGCCTCTTTAGTCAAAGTCCTCGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTTAAGCCTTTGATGAAGGCTGCCTCTTTAGTCAAAGTCCTCGAG  100

seq1  AGGAGGGTAAATTGACTTAATTTTTTGTTCTTCATTTTTTATATTATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGTAAATTGACTTAATTTTTTGTTCTTCATTTTTTATATTATCCT  150

seq1  TTATATCTTTATATTATCCTTTGTATCTTTACATTTTATATTATCCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTTTATATTATCCTTTGTATCTTTACATTTTATATTATCCTTTG  200

seq1  TATCTTTATATTTTAGCTTCCTTTCTTTTTCTCTTTTTATATTTCTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTATATTTTAGCTTCCTTTCTTTTTCTCTTTTTATATTTCTTAAG  250

seq1  TTACTTATTTTTCTGCGCGCGTCTTCTTTTTCCTTTCTCTCTGTTTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTATTTTTCTGCGCGCGTCTTCTTTTTCCTTTCTCTCTGTTTCTGA  300

seq1  TATGCCTTCCTGGTACTCCTACAAAGTCGCTGCCCTTCCTTAACAGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTCCTGGTACTCCTACAAAGTCGCTGCCCTTCCTTAACAGCTGG  350

seq1  TCCCACACAAACCCAGCAACAATTACCAGACCCACTGCGTAAGAAAGCAT  400
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCCCACACAAACCCAGCAACAACTACCAGACCCACTGCGTAAGAAAGCAT  400

seq1  ACCTCTCAGAGACTTACCTTAATTTCTTTATACTTACTGGTACCACCGTT  450
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACCTCTCAGAGACTTACCTTAATTTCTTTATACTTACCGGTACCACCGTT  450

seq1  CCTCAGCTGAAGAGTTCTGAATCCACGCAGTTGAATCCTTCTCAGCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCTGAAGAGTTCTGAATCCACGCAGTTGAATCCTTCTCAGCAGTC  500

seq1  TGTTTTGCAGGAACCTTTATTAACACCGCT  530
      ||||||||||||||||||||||||||||||
seq2  TGTTTTGCAGGAACCTTTATTAACACCGCT  530

seq1: chr4_139363436_139364373
seq2: B6Ng01-276B04.g_66_1006

seq1  GAATTCCCGCCGATTATTCCCGCGGGTGCAGATGTACATTAATGCAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGCCGATTATTCCCGCGGGTGCAGATGTACATTAATGCAGGAG  50

seq1  CGAAGTGGGGGGACGCAGCTTTGCGCCCAGCCAGAGAGAAACGGCTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGTGGGGGGACGCAGCTTTGCGCCCAGCCAGAGAGAAACGGCTAGCA  100

seq1  GTTCCTTTTAACAAGCCGTTGTCTGGCTTGATCTTGTCACTCTGAAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTTTAACAAGCCGTTGTCTGGCTTGATCTTGTCACTCTGAAGAGG  150

seq1  GCCATTGAGAGGCATTCAAGCATTGGCCCTGGGGGGACAAAAGGGCTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGAGAGGCATTCAAGCATTGGCCCTGGGGGGACAAAAGGGCTCAG  200

seq1  TATATATACTGACTGCTCAGTTGCCTGCAGGCTCGGGGGCTTTTGTCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACTGACTGCTCAGTTGCCTGCAGGCTCGGGGGCTTTTGTCTAA  250

seq1  CCTTCCCTTAATAAACTTTTTGGAAGAGTTCATCAGCCCACTTCAATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCTTAATAAACTTTTTGGAAGAGTTCATCAGCCCACTTCAATGGC  300

seq1  TGATGTTCTCATTTTCAAGGAGAGAGGAAAACAGCAGAAGGCTGGCGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTCTCATTTTCAAGGAGAGAGGAAAACAGCAGAAGGCTGGCGTCT  350

seq1  TTTTTTTTTAAAGGGAGCATTCTCAATAAGAGGGGGAAGGGGGAAAGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAAAGGGAGCATTCTCAATAAGAGGGGGAAGGGGGAAAGGGA  400

seq1  GAAAGAGCCTGAGACTGCAGACACCCCACTTTAAAGGGAAAAAGAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCCTGAGACTGCAGACACCCCACTTTAAAGGGAAAAAGAACACA  450

seq1  TCGCAGGTCCTAAAAGGGGACCCAGACAAAACGACTATTCATCGCCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGGTCCTAAAAGGGGACCCAGACAAAACGACTATTCATCGCCTGGA  500

seq1  TGCTGTTTTCCCCGGCCCCTGAGCGGACCGGAGAGGCAGGGAGGCCATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTTCCCCGGCCCCTGAGCGGACCGGAGAGGCAGGGAGGCCATCT  550

seq1  CTGGACTCTGCAGGCCTCTTCCAGCAGTGATTTGCAGACCTGAGAGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTCTGCAGGCCTCTTCCAGCAGTGATTTGCAGACCTGAGAGGTTT  600

seq1  AGGCGCCTCTGCAGCAGGCAGTGTTTAAAAGTGAAGTGAGCCGGGGCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGCCTCTGCAGCAGGCAGTGTTTAAAAGTGAAGTGAGCCGGGGCCTA  650

seq1  GCAAACACAGAAGTGGATGATCACAGTCAGCTATTGGATGGATCACACGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACACAGAAGTGGATGATCACAGTCAGCTATTGGATGGATCACACGG  700

seq1  CCCCCAATGGAGAAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAATGGAGAAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGC  750

seq1  AACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCGGGAGCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCGGGAGCTCT  800

seq1  TGTC-TTTAGCTGCATATGTATCAAAAGATGGCCTAGTCAGCCATCGCTG  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTAGCTGCATATGTATCAAAAGATGGCCTAGTCAGCCATCGCTG  850

seq1  CAAAGAGAGGCCCA-TTGGACTTGCAAACTTTATATGCCTCAGTACAGGG  898
      | |||||||||||| |||||||||| ||||||||||||||||||||| ||
seq2  C-AAGAGAGGCCCATTTGGACTTGC-AACTTTATATGCCTCAGTACAAGG  898

seq1  GAACGCCAGGGCCAAAAAGGGGGAGT-GGGTGGG--TAGGGGG  938
      |||||||||||||||||||||||||| |||||||  |||||||
seq2  GAACGCCAGGGCCAAAAAGGGGGAGTGGGGTGGGGTTAGGGGG  941