BAC Information

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BAC

Clone NameB6Ng01-276G05
Chromosome1 (Build37)
Map Location 103,120,964 - 103,121,961
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276G05.bB6Ng01-276G05.g
ACCGA077182GA077183
length7551,005
definitionB6Ng01-276G05.b B6Ng01-276G05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactctcgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgctgcacacacggct
ctcctcagagattactggcatcatgcatgcaattgctcacggcacggctc
tccacacttcacaacattcacaaataatataaaatacctttgtgtgactc
taagaaaatgaaagatctgtatgataagaacttcatgtctctgaagaaag
aaatcaaagaagatctcagaagatggaaagatctcccatgctcatggatt
ggcaggaacaatatagtaaaaatggctatgttgccaaaagcaatctacat
attcaatgaaatccccatcaaaattccaactcaattcttcaacgaattag
aaaggacaatttgcaaattcatctggaataacaaaaaaactatgatagaa
taaattcttctcaatgataaaagaagctttaatggaatcaccatacctga
ttttaagctgtactacagagcaactgtgataaaaactgcatggtactggt
acagtgacaaacaggtagatcaatggaatagaattgaagacccagaaatg
aattcacacacctatggtcacttgattttgacatgggaattaaaaccatc
cagtgtaaaaaagacagcattttcaacaaatggggggacgggggcggcga
aaagaaaaaaattctcttctttcgcgagtgcgaagcctctatatcgaaag
atagg

gaattcttacccaaactccaacatttcaagttattttaatgttatgaaaa
aagaaaggtgctctgacttggctgtatggtgaaattttttgttttgtttt
gttttgtttttttggtttgtttgttttgttgttgttgttgtttttaatgt
tgttttggctttttaaatattttttagatataatgaaaactttgcggggg
gaaatgtttaccaagtgttgtataatattcaagacaatcacatactattt
tacttaatattcacaaatgggcccatttctttgcacctcatatggatttc
aatcctatgccaaatttaatatgtttggactaaatgaagatagtacttta
aatcttatgaatttttagtttttctcttatgtatgagtgttttcttggtc
ttgggtttgtgtgtgcctcaatatggagggcagagaacacagtgcaggtc
ttgtctttcctttcactgtgcatgtctctgtattcaaatccatttgtcag
gatccatttgccacatgtttttatttacctagagtggtggtttgagtagt
tacagctccacagactgatgtgtttcaatgcttggcccatggtgattgtc
actattaggaagagtggtcctcttatagtaggtgtgatgttgttgtaggt
agtgggtcactgtggggtcaggcttgaaggtctttggtgctcaagctaca
gccagtaaagcattgtctttttctgcctccctttgaatcaagatgtgaaa
ctcttggctactctagcatcttgtatgcctgcaccatgtcatgtttccca
ctctgatgataaatgaacttgaactttaaaattgtaagccacccacaaat
taaatgtttactttataaagagttaaaaattcttaagacatctacagaga
caattacatcaatcttaataaagaactttagctattcttgtttataactt
ttggttgaattattaaaataagaaattaattaatcttaaaagggacaatt
aaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103120964_103121961
seq2: B6Ng01-276G05.g_67_1071 (reverse)

seq1  AATTT-ATTGT-CCTTTTAATATTAATTTATTTCTTTATTTTAATAATTC  48
      ||||| ||||| |||||||| ||||||| ||||| |||||||||||||||
seq2  AATTTAATTGTCCCTTTTAAGATTAATTAATTTC-TTATTTTAATAATTC  49

seq1  AACAAAAAG-TATAAACAAGAATAGCTAAAGTTCTTTATTAAGATTGATG  97
      ||| ||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAAAGTTATAAACAAGAATAGCTAAAGTTCTTTATTAAGATTGATG  99

seq1  T-ATTGTCTCTGTGGATGTCTT-AGGATTTTTAACTC-TTATAAAGTAAA  144
      | ||||||||||| |||||||| || ||||||||||| ||||||||| ||
seq2  TAATTGTCTCTGTAGATGTCTTAAGAATTTTTAACTCTTTATAAAGT-AA  148

seq1  ACATTTAA-TTGTGGGTGGCTTACAATTTTAAAGTTC-AGTTCA-TTATC  191
      |||||||| |||||||||||||||||||||||||||| |||||| |||||
seq2  ACATTTAATTTGTGGGTGGCTTACAATTTTAAAGTTCAAGTTCATTTATC  198

seq1  ATCAGAGTGGGAAACATGACATGGTGCAGGCATACAAGATGCTAGAGTAG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTGGGAAACATGACATGGTGCAGGCATACAAGATGCTAGAGTAG  248

seq1  CCAAGAGTTTCACATCTTGATTCAAAGGGAGGCAGAAAAAGACAATGCTT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTTTCACATCTTGATTCAAAGGGAGGCAGAAAAAGACAATGCTT  298

seq1  TACTGGCTGTAGCTTGAGCACCAAAGACCTTCAAGCCTGACCCCACAGTG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTGTAGCTTGAGCACCAAAGACCTTCAAGCCTGACCCCACAGTG  348

seq1  ACCCACTACCTACAACAACATCACACCTACTATAAGAGGACCACTCTTCC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTACCTACAACAACATCACACCTACTATAAGAGGACCACTCTTCC  398

seq1  TAATAGTGACAATCACCATGGGCCAAGCATTGAAACACATCAGTCTGTGG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTGACAATCACCATGGGCCAAGCATTGAAACACATCAGTCTGTGG  448

seq1  AGCTGTAACTACTCAAACCACCACTCTAGGTAAATAAAAACATGTGGCAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAACTACTCAAACCACCACTCTAGGTAAATAAAAACATGTGGCAA  498

seq1  ATGGATCCTGACAAATGGATTTGAATACAGAGACATGCACAGTGAAAGGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCCTGACAAATGGATTTGAATACAGAGACATGCACAGTGAAAGGA  548

seq1  AAGACAAGACCTGCACTGTGTTCTCTGCCCTCCATATTGAGGCACACACA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGACCTGCACTGTGTTCTCTGCCCTCCATATTGAGGCACACACA  598

seq1  AACCCAAGACCAAGAAAACACTCATACATAAGAGAAAAACTAAAAATTCA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGACCAAGAAAACACTCATACATAAGAGAAAAACTAAAAATTCA  648

seq1  TAAGATTTAAAGTACTATCTTCATTTAGTCCAAACATATTAAATTTGGCA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTAAAGTACTATCTTCATTTAGTCCAAACATATTAAATTTGGCA  698

seq1  TAGGATTGAAATCCATATGAGGTGCAAAGAAATGGGCCCATTTGTGAATA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATTGAAATCCATATGAGGTGCAAAGAAATGGGCCCATTTGTGAATA  748

seq1  TTAAGTAAAATAGTATGTGATTGTCTTGAATATTATACAACACTTGGTAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTAAAATAGTATGTGATTGTCTTGAATATTATACAACACTTGGTAA  798

seq1  ACATTTCCCCCCGCAAAGTTTTCATTATATCTAAAAAATATTTAAAAAGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCCCCCGCAAAGTTTTCATTATATCTAAAAAATATTTAAAAAGC  848

seq1  CAAAACAACATTAAAAACAACAACAACAACAAAACAAACAAACCAAAAAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAACATTAAAAACAACAACAACAACAAAACAAACAAACCAAAAAA  898

seq1  ACAAAACAAAACAAAACAAAAAATTTCACCATACAGCCAAGTCAGAGCAC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAACAAAACAAAAAATTTCACCATACAGCCAAGTCAGAGCAC  948

seq1  CTTTCTTTTTTCATAACATTAAAATAACTTGAAATGTTGGAGTTTGGGTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTTTCATAACATTAAAATAACTTGAAATGTTGGAGTTTGGGTA  998

seq1  AGAATTC  998
      |||||||
seq2  AGAATTC  1005


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