BAC Information

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BAC

Clone NameB6Ng01-276M19
Chromosome1 (Build37)
Map Location 41,442,174 - 41,442,851
singlet/doubletsinglet
Overlap genenone
Upstream geneIl1rl1, Il18r1, Il18rap, Slc9a4, Slc9a2, Mfsd9, Tmem182, Ppia-ps1_352.1, LOC100041441
Downstream geneLOC383634, LOC666582
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276M19.bB6Ng01-276M19.g
ACCGA077487GA077488
length1,002678
definitionB6Ng01-276M19.b B6Ng01-276M19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaaaggggttatttgatt
ttctggagtccacattcttgagttctttatatatattgggtattagtccc
ctatctgatttaggatacgtaaagatcctttcccaacgtataggtggcct
ttttgtcttattgacagtgtcttttgccttgtagaagctttgcaatttta
tgaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctatacccatatcttcgaggcttttccctac
tttctactctataagtttcagtgtctctggttttatgtggagttctttaa
tccacttagttttgactttagtacaaggagataggaatggatcaatttgc
attcttctagatgataacgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggtttttgctcccttgtcaaagatcaagtg
accataggtgtttgggttcattgctgggtcttcaattttattccattggt
ctacttgtctgtcactataccagtaccatgcagtttttatcactattgct
ctttagtacagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaagttttttgttattccagatga
atttgcaaatcgccctttctaattcattgaagaattgagttggaatttcg
atgaggattgcattgaatctgtacattgctttggcaagatagccgttttt
ttctatattgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagttcttatataca
gatctttcacttccttagttagagtcatgccaaggtatttttatattatt
tgtgactattggagaaggctattggtttccctaattttctttcttcagcc
tt
gaattctgaggggaaaaaagacccacataggagtctacaaaaatggtttg
attttcataagcaccctgctatacactatattttcattttcatcttggaa
attctcattgttatcttcgacctttgaactcttacgctccatatctgtgc
ttttaaaaggggcaattaggaaaagatccacagattccattttttgtcca
tattagttttcactagatgattaaagttgcttgaggaattatatttggtt
ctgagatatggaaatgctttcatgagctctcttagtaacaattatattga
gggatatggaaaatctgtctttccaaagggtgtttatttaagtcctcatt
gctggggtgactgtgatagaaagtgggacatgaggggtagagggatggta
cagcagtgtggagcacttgttgcttttgcatagaacagggttcagttccc
agcacccacgtgttaggttacagctgtctgtaattccagttccaagagat
ttgatgctctcttctgactgtctcagggactaggcacttacatggtaaag
atacatacaagtaatcaaaacattcatgcacgtaaaaaataaataatatt
ttcctatgtcaggagtcattggctaatacaaaatggaatccagtgtgtgt
gtgtgtgtgtgtgttgttgttgttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_41442174_41442851
seq2: B6Ng01-276M19.g_67_744

seq1  GAATTCTGAGGGGAAAAAAGACCCACATAGGAGTCTACAAAAATGGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGGGGAAAAAAGACCCACATAGGAGTCTACAAAAATGGTTTG  50

seq1  ATTTTCATAAGCACCCTGCTATACACTATATTTTCATTTTCATCTTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATAAGCACCCTGCTATACACTATATTTTCATTTTCATCTTGGAA  100

seq1  ATTCTCATTGTTATCTTCGACCTTTGAACTCTTACGCTCCATATCTGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCATTGTTATCTTCGACCTTTGAACTCTTACGCTCCATATCTGTGC  150

seq1  TTTTAAAAGGGGCAATTAGGAAAAGATCCACAGATTCCATTTTTTGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAGGGGCAATTAGGAAAAGATCCACAGATTCCATTTTTTGTCCA  200

seq1  TATTAGTTTTCACTAGATGATTAAAGTTGCTTGAGGAATTATATTTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTTTCACTAGATGATTAAAGTTGCTTGAGGAATTATATTTGGTT  250

seq1  CTGAGATATGGAAATGCTTTCATGAGCTCTCTTAGTAACAATTATATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATATGGAAATGCTTTCATGAGCTCTCTTAGTAACAATTATATTGA  300

seq1  GGGATATGGAAAATCTGTCTTTCCAAAGGGTGTTTATTTAAGTCCTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATGGAAAATCTGTCTTTCCAAAGGGTGTTTATTTAAGTCCTCATT  350

seq1  GCTGGGGTGACTGTGATAGAAAGTGGGACATGAGGGGTAGAGGGATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGTGACTGTGATAGAAAGTGGGACATGAGGGGTAGAGGGATGGTA  400

seq1  CAGCAGTGTGGAGCACTTGTTGCTTTTGCATAGAACAGGGTTCAGTTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGTGGAGCACTTGTTGCTTTTGCATAGAACAGGGTTCAGTTCCC  450

seq1  AGCACCCACGTGTTAGGTTACAGCTGTCTGTAATTCCAGTTCCAAGAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCACGTGTTAGGTTACAGCTGTCTGTAATTCCAGTTCCAAGAGAT  500

seq1  TTGATGCTCTCTTCTGACTGTCTCAGGGACTAGGCACTTACATGGTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCTCTCTTCTGACTGTCTCAGGGACTAGGCACTTACATGGTAAAG  550

seq1  ATACATACAAGTAATCAAAACATTCATGCACGTAAAAAATAAATAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACAAGTAATCAAAACATTCATGCACGTAAAAAATAAATAATATT  600

seq1  TTCCTATGTCAGGAGTCATTGGCTAATACAAAATGGAATCCAGTGTGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGTCAGGAGTCATTGGCTAATACAAAATGGAATCCAGTGTGTGT  650

seq1  GTGTGTGTGTGTGTTGTTGTTGTTGTTG  678
      ||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTTGTTGTTGTTGTTG  678