BAC Information

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BAC

Clone NameB6Ng01-277C17
Chromosome1 (Build37)
Map Location 102,976,981 - 102,977,718
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, EG666200
Downstream geneLOC100041909, LOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277C17.bB6Ng01-277C17.g
ACCGA077758GA077759
length1,194738
definitionB6Ng01-277C17.b B6Ng01-277C17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagggtccctgttttcaggtggacaaggagtcagcaggatgacaa
cagacacagacacccaagagagtgctgtatctgaatataatttctcaaag
ggagcatcatacagaagaaaaatagggaagttaggtgatacatctgccaa
ggtacatcaagaatgcataatggctctttacacaaaacagagaaaatgca
tacataaaagttaacaggaaccaggcagtgttacaactgagataagatca
tccctatctaaaatcagttattcataggagccaggtgaaagggctaatac
tcccaggtgcaatactagtttattgttaaggaacatcaggggtcccttag
taaatacctaattatgctattcctctgggcctagtgaaaaacatgcacca
gggaaattccatactgctaatcttttcatgaataatacaatactctagtt
cctccttaaaccaaaacccactttcttctactattatataaggtaggctg
caaatcatgtctgtaatgagaattgtaagtttactattttgaactagccc
tgaaatttctagctcctatccagcgaactgtgggatgcctgattactaac
tatcaacactggaggcatttcgtctgaatgagtaacattcttatgaaatt
ctaaacccagggtcggctcaaggactgcctaggtcattggtaaaggccag
aaagcaaagttcaacctaatttaggtatttgtcaagtcattgcctggagg
catctataataaaacaatactgaaagaaaaacccagaaccattcaccaac
tataggaaggatgagtctgaaatacatctgtttatggggcaccagaaatt
ttccaggaatcatgtttccatgaaactttatgcctcagactgcagccaag
cttttgggcctaccacacagttttactgagtgggtgtgtcatatttgcat
gtgtatctgacaatttgagactcactaataggtattcaccattttcccct
gaagcaagtgactcacatgatgttaactgcaaatgggcttggcatcctgc
atgaagactagcctcaggctttcttgcctcaaatctggatacaatgtgca
ccacaattctaatggatttgccaataagtggaaatagttggtacaagcta
cgctaatttctaactcaatgtagcctttcagtatcataggacag

gaattctggctggacatggactctctccctttcccctcttcccctacacc
ctcagcctagtaatattcaataggagcagtagaggaaatggagaaaattt
gagaaaacaacagcagtgggtagagatgtttcttccaataagaacaatct
aggacattggtttcctctgtttcatcctcctatgtgaatgatatgcctgt
gtgcatacttatacttgaaggtggtacatgggcctaggttttcctcttac
ctggtacgaaaaatgtatcttttttccaagttttcctccctcagataagg
ttcaatattttcagcgaaagaaaaataaagatttgagtgaaacaaatctc
tttaataattttcttataatgcaagaagacagagaatgaacaatatcaac
tatgacttctatccttgtgagcttgccttgttatctggacatagcatatt
ttcatttgagaagaaagaatcatacagaattgtctggatctgattggctt
gtgggcatgtatatgtagattatcatcattactttttgattcaggaggat
ccagcctactgaatgttgtgatcataaaaagatagaggtgtataagaata
tgttttatggtttctagggggagggggttgcctcagtgggcccatgccaa
gacatcccttcccccaacggaccagccacaaaatgatatattatataatg
gagtttattcaaggcatggggtgggaggtaagagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102976981_102977718
seq2: B6Ng01-277C17.g_66_803 (reverse)

seq1  TACCCTCTTACCTCCCACCCCATGCCTTGAATAAACTCCATTATATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCTTACCTCCCACCCCATGCCTTGAATAAACTCCATTATATAATA  50

seq1  TATCATTTTGTGGCTGGTCCGTTGGGGGAAGGGATGTCTTGGCATGGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTTGTGGCTGGTCCGTTGGGGGAAGGGATGTCTTGGCATGGGCC  100

seq1  CACTGAGGCAACCCCCTCCCCCTAGAAACCATAAAACATATTCTTATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGGCAACCCCCTCCCCCTAGAAACCATAAAACATATTCTTATACA  150

seq1  CCTCTATCTTTTTATGATCACAACATTCAGTAGGCTGGATCCTCCTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATCTTTTTATGATCACAACATTCAGTAGGCTGGATCCTCCTGAAT  200

seq1  CAAAAAGTAATGATGATAATCTACATATACATGCCCACAAGCCAATCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTAATGATGATAATCTACATATACATGCCCACAAGCCAATCAGA  250

seq1  TCCAGACAATTCTGTATGATTCTTTCTTCTCAAATGAAAATATGCTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACAATTCTGTATGATTCTTTCTTCTCAAATGAAAATATGCTATGT  300

seq1  CCAGATAACAAGGCAAGCTCACAAGGATAGAAGTCATAGTTGATATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATAACAAGGCAAGCTCACAAGGATAGAAGTCATAGTTGATATTGTT  350

seq1  CATTCTCTGTCTTCTTGCATTATAAGAAAATTATTAAAGAGATTTGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTGTCTTCTTGCATTATAAGAAAATTATTAAAGAGATTTGTTTC  400

seq1  ACTCAAATCTTTATTTTTCTTTCGCTGAAAATATTGAACCTTATCTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAATCTTTATTTTTCTTTCGCTGAAAATATTGAACCTTATCTGAGG  450

seq1  GAGGAAAACTTGGAAAAAAGATACATTTTTCGTACCAGGTAAGAGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAACTTGGAAAAAAGATACATTTTTCGTACCAGGTAAGAGGAAAA  500

seq1  CCTAGGCCCATGTACCACCTTCAAGTATAAGTATGCACACAGGCATATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGCCCATGTACCACCTTCAAGTATAAGTATGCACACAGGCATATCA  550

seq1  TTCACATAGGAGGATGAAACAGAGGAAACCAATGTCCTAGATTGTTCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAGGAGGATGAAACAGAGGAAACCAATGTCCTAGATTGTTCTTA  600

seq1  TTGGAAGAAACATCTCTACCCACTGCTGTTGTTTTCTCAAATTTTCTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAAACATCTCTACCCACTGCTGTTGTTTTCTCAAATTTTCTCCA  650

seq1  TTTCCTCTACTGCTCCTATTGAATATTACTAGGCTGAGGGTGTAGGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTACTGCTCCTATTGAATATTACTAGGCTGAGGGTGTAGGGGAA  700

seq1  GAGGGGAAAGGGAGAGAGTCCATGTCCAGCCAGAATTC  738
      ||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAAAGGGAGAGAGTCCATGTCCAGCCAGAATTC  738


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