BAC Information

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BAC

Clone NameB6Ng01-277H14
Chromosome1 (Build37)
Map Location 113,303,901 - 113,305,014
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041429, EG626652, Cdh19
Downstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277H14.bB6Ng01-277H14.g
ACCGA077984GA077985
length1,0991,172
definitionB6Ng01-277H14.b B6Ng01-277H14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaagaaacaccttatgaatacctgatttgggggaaaaacaaaa
gctcaacaggatcactgggttcataggaattacaaggcacagaagcattc
attggatactcatgaaacccctcttgttccatagagattgatgaagttgg
ggcattttacaaaagcatttaactaagatacatattctctaatgaaactg
taactaattgaccaatgggatgtcttggtgatataactaatattaaatca
ctgtaagaaatctcagtaaactcactggttcattgatatcaattttagac
aaatgttttcttttgtctcagttcacattttgttttgtttttgtttgtct
gttttattttgtttggtttggttcattttgaaacctttggtttcaaaggt
ttatttatttatttttttgtctttcctatcatgattagaaattctgttca
tatgtttcttagaaaagtcctctatcaataaaataatcaatgtgaattcc
tataatccaaatctggtgactttaattactcaagccctttggaaaaactc
tttacttagtttgtccatgcctacactctcttgtacttaaccttttcatt
ccaaattccattgagtggagatttgagcaggtgaggaactgggagagcaa
ggaggcacagattagcctgacacagaagaagatctgacctaaaagcaaac
agacatgtgaggatcagatacatttattggagcctatttctacagaagac
cagctgatcgaactagccatgtgagactagatccttgcacttcccattca
tagctgtccactgtaacctcagcatacaggaaccaaggagcaacctggga
cagaatccttccagattctttctgagcctggagctgatcctgtgccacaa
cattacttacccaatatgcaggagagagtggtcttccaggagtactgaca
cctgaccaacatgtctgctcaatttctggcccaagtgggacctgtgtaag
ccatcagatacaggatcaagacagctgagacaggaatatttctggtttca
tctgcatctgagatgattctgtgccacagctctcatacccgattctttc
gaattccaggacatctttaattctttttatttcttccctgaccaagttat
cattcagtagagaattgttcagtttccatgtgtgtgtgggctttctcttg
tttttgttgttattgaagactaaccttaggccatgtttatctaataggat
gcatgggattatttcaatcttcttgtatacattgaggcttgttttgtgac
caattatatgatcaatttttggagaaggtaatatgaggtgctgagaagaa
gatgtacttttttcgttttagggtgaaatgttctgtagatatctgttaag
tccatttgtttcataaactctattcatatcactgtatctctgtttagttt
ctgttacattgacctgcccattaatgagaatggagtgttgaagtctccca
ttattactatgtgtggttcaatgtgtgttttaaacttcagcaaagtttct
tttatgaatgtgggtgcccttgcatttgaggcataaatgtctggctttct
cttggattttttttgatgaatataaagtgtctttcctcatcacatttgct
aagttttggttgaaagtctattttattagatattaggatagcaaatcctg
ttttttcttgggaccatttgtttggaagaatctttaccagccttttcttg
tgagggagtatctctttttttattgaggtgtgtttcttgtatgtagaaaa
atgctggataccttttgtgtgcaggttttgattactattgctgagtagta
cagctttaggtcagtgatggtaatacctccagaagttctgttgcagttca
gaaatgttttgtctatactggttttttgtttgtttgtttgttggtttgtt
ttgttttgtttttttccatatgaagttgataattgtttttcatatctgtg
aagaattctgctggatttttgatggggattgcattgaatctctagattgc
tttgggtagatggcattgttttactatgttattctgctaaacatgtctta
tggggggatctttccattttctgagtccttcttcgatttctttcgtcaga
gactcttagttcttcttcattaaagatcttttcccttggctagtcagagt
taactcaagtgactaggctatgggcattgaaatgtatatggttcatcacg
ctagcgtttggcgctccgtctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_113303901_113305014
seq2: B6Ng01-277H14.b_43_1141

seq1  GAATTCTTAAGAAACACCTTATGAATACCTGATTTGGGGGAAAAACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGAAACACCTTATGAATACCTGATTTGGGGGAAAAACAAAA  50

seq1  GCTCAACAGGATCACTGGGTTCATAGGAATTACAAGGCACAGAAGCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACAGGATCACTGGGTTCATAGGAATTACAAGGCACAGAAGCATTC  100

seq1  ATTGGATACTCATGAAACCCCTCTTGTTCCATAGAGATTGATGAAGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATACTCATGAAACCCCTCTTGTTCCATAGAGATTGATGAAGTTGG  150

seq1  GGCATTTTACAAAAGCATTTAACTAAGATACATATTCTCTAATGAAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTTACAAAAGCATTTAACTAAGATACATATTCTCTAATGAAACTG  200

seq1  TAACTAATTGACCAATGGGATGTCTTGGTGATATAACTAATATTAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAATTGACCAATGGGATGTCTTGGTGATATAACTAATATTAAATCA  250

seq1  CTGTAAGAAATCTCAGTAAACTCACTGGTTCATTGATATCAATTTTAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGAAATCTCAGTAAACTCACTGGTTCATTGATATCAATTTTAGAC  300

seq1  AAATGTTTTCTTTTGTCTCAGTTCACATTTTGTTTTGTTTTTGTTTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTTTCTTTTGTCTCAGTTCACATTTTGTTTTGTTTTTGTTTGTCT  350

seq1  GTTTTATTTTGTTTGGTTTGGTTCATTTTGAAACCTTTGGTTTCAAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTTGTTTGGTTTGGTTCATTTTGAAACCTTTGGTTTCAAAGGT  400

seq1  TTATTTATTTATTTTTTTGTCTTTCCTATCATGATTAGAAATTCTGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTTTTTGTCTTTCCTATCATGATTAGAAATTCTGTTCA  450

seq1  TATGTTTCTTAGAAAAGTCCTCTATCAATAAAATAATCAATGTGAATTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCTTAGAAAAGTCCTCTATCAATAAAATAATCAATGTGAATTCC  500

seq1  TATAATCCAAATCTGGTGACTTTAATTACTCAAGCCCTTTGGAAAAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCCAAATCTGGTGACTTTAATTACTCAAGCCCTTTGGAAAAACTC  550

seq1  TTTACTTAGTTTGTCCATGCCTACACTCTCTTGTACTTAACCTTTTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAGTTTGTCCATGCCTACACTCTCTTGTACTTAACCTTTTCATT  600

seq1  CCAAATTCCATTGAGTGGAGATTTGAGCAGGTGAGGAACTGGGAGAGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTCCATTGAGTGGAGATTTGAGCAGGTGAGGAACTGGGAGAGCAA  650

seq1  GGAGGCACAGATTAGCCTGACACAGAAGAAGATCTGACCTAAAAGCAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCACAGATTAGCCTGACACAGAAGAAGATCTGACCTAAAAGCAAAC  700

seq1  AGACATGTGAGGATCAGATACATTTATTGGAGCCTATTTCTACAGAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTGAGGATCAGATACATTTATTGGAGCCTATTTCTACAGAAGAC  750

seq1  CAGCTGATCGAACTAGCCATGTGAGACTAGATCCTTGCACTTCCCATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGATCGAACTAGCCATGTGAGACTAGATCCTTGCACTTCCCATTCA  800

seq1  TAGCTGTCCACTGTAACCTCAGCATACAGGAACCAAGGAGCAACCTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTCCACTGTAACCTCAGCATACAGGAACCAAGGAGCAACCTGGGA  850

seq1  CAGAATCCTTCCAGATTCTTTCTGAGCCTGGAGCTGATCCTGTGCCACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCTTCCAGATTCTTTCTGAGCCTGGAGCTGATCCTGTGCCACAA  900

seq1  CATTACTTACCCAAATATGCAGGGAGAGAGTGGGTCTTCCAGGAGTACTG  950
      |||||||||||| |||||||| ||||||||| ||||||||||||||||||
seq2  CATTACTTACCC-AATATGCA-GGAGAGAGT-GGTCTTCCAGGAGTACTG  947

seq1  ACAACCTGACCAACATGTCTGCTCAAATTTCTGGCCCAAGTGGGACCTGT  1000
      || ||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AC-ACCTGACCAACATGTCTGCTC-AATTTCTGGCCCAAGTGGGACCTGT  995

seq1  GGTAAGCCATCAGGATACAGGAATCAAGGAACAGCTGGAGACAGGAATA-  1049
       ||||||||||| |||||||| ||||||  |||||| |||||||||||| 
seq2  -GTAAGCCATCA-GATACAGG-ATCAAG--ACAGCT-GAGACAGGAATAT  1039

seq1  TTCTGGTTTCCATCTGCAATCTGGAGATGATCCTGTGCCACAGCTCTCCA  1099
      ||||||||| ||||||| |||| |||||||| ||||||||||||||| ||
seq2  TTCTGGTTT-CATCTGC-ATCT-GAGATGATTCTGTGCCACAGCTCT-CA  1085

seq1  TACCCAAATTCTTTC  1114
      |||||  ||||||||
seq2  TACCC-GATTCTTTC  1099