BAC Information

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BAC

Clone NameB6Ng01-278B06
Chromosome1 (Build37)
Map Location 104,184,964 - 104,186,117
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056, LOC100041067
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278B06.bB6Ng01-278B06.g
ACCGA078419GA078420
length1,2211,143
definitionB6Ng01-278B06.b B6Ng01-278B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaaccgaggaatcgcaaatggctgagaagcccctaaagaaatg
ttcaaagtgattactgatacaagaaatgcaaatccaaacgacctcataaa
ttctacctcacaccaatcagaactgataagatcaaatccttagttgacaa
tacatgttagacaggatgtggagagagaggaattgctggttagattacaa
actggttcaaccaatctggaagtcaatctggtggtgcctcaaatatcaga
aatagatctacctgaagacacagctataccactcttgtgaatatacccaa
aagatatcccaccatgacacaggggtgcatgttccactatgttcatcaca
gccttatatgtgatagccagaagctggaaacaaccccattgtcccaagtc
agaagaattgatacagaaaatgtggttcatttacgcaatggaatactaat
cagctgttaagaaggagggcatcctgtgttttgcaggcaaaaggatggaa
ctagaaaatatcatccttagtgaggtaattcagacccagaagaaagaatg
gaaacagacaacctcaggagatagaaggttggagggaccctccagaatgc
accaaagttgagagactcaggactcaaagggaggtaccttaaatgaaatg
tccaatagtggggagagggaacttaaagagcccacttccagcaagaagac
agtacatcaaatgaggaatgggtttgccaatctacagtcacaactctgac
ccataactgttctcatctgaaagaattacagggatggaaacggggattca
gctcaacggtaggtcccaaattctgacactactagtaaggctatggagca
ctcacaaaaagaggacttatcatgatggcaccctgaaagacccaacaagt
agctgaaagaatcagatgcagatatttgcacccaaacagttgacagaact
gctgacccctattgttgaattagggaaggccgaaagaagctgagagaaat
gaagacctgcagagcacagcagtctcattttatctggactaccaacagga
gcataaaccagctgatatgaggccccacacccatacagtagagactgcgg
gtctatggtcattcagagatgatgcactaccctcacagactggaaggtgc
ctgaagattgaagtcattggaatatgggggagtggaacatcccatcgcag
acactgtctgtgcgcggcgag

gaattcaatgaagcctgaagtcccctttcaagggactgaactaatattga
agtctaaactgatgaccagggataatcacatctaagctgaccctgctatg
ctgtgatcccattcatttttggcctaccattgtctgggctctagtctcat
tctgtcacacagtctcttaagcctgttaaatctgagtgaaaactctaaaa
gtcgtgttttcctcctggctggggaattttcatctctgaacttgagactg
ctcagaaaattcctgttcctttgtggtttagcctaacagtacatttgaga
gacttaatgtctctttagagttgcttgatttctgtcaaaatagttatatg
ttcaaagtttcaatacagtatatacattttaggatggagacttagtgagt
aattccatagagaatcacatctaaaggaggaatagagttataatggcagt
catgagactttaattggtctttcctctgtgggacacatatgcgaagttat
atttgaagaacggagaagaggcaactcattatcttgttagtgaatatgtt
tataacattcacttcatttattttcatttgtggggttatgaacacatgaa
aggagatattcacagaagccaaacgagaacatctgataccctggagctgg
agctacaggcaattgtgtgctgcctaatgtggatgttggaaattgagctt
aggtccccagcaagagaagcacatgttctcaactctgagccattataaaa
agtattaagaaatgtactgcaagacagagaatcatcatgatccattttct
ttatggggaagctgatttagcatggtgtagtattctccagatatgaattt
ggaatgactcctgactatgtttaactcaaatccaacttgaaaaactcaaa
atttgcaatcacagattacattaaattgggggtggtagaaatggaatcta
cagtgaactgcataacttataagaattagacgccacctttagatcatatt
aaatgctggtatatgcagcatttacatgtacaatgtggcatactcttgta
tccacattgatgatgaatatcagtggatttcagagaactgtgggccaccc
aagctagcctacttattggctcaggacagtggagaaacctgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_104184964_104186117
seq2: B6Ng01-278B06.g_68_1210

seq1  GAATTCAATGAAGCCTGAAGTCCCCTTTCAAGGGACTGAACTAATATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAAGCCTGAAGTCCCCTTTCAAGGGACTGAACTAATATTGA  50

seq1  AGTCTAAACTGATGACCAGGGATAATCACATCTAAGCTGACCCTGCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAACTGATGACCAGGGATAATCACATCTAAGCTGACCCTGCTATG  100

seq1  CTGTGATCCCATTCATTTTTGGCCTACCATTGTCTGGGCTCTAGTCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATCCCATTCATTTTTGGCCTACCATTGTCTGGGCTCTAGTCTCAT  150

seq1  TCTGTCACACAGTCTCTTAAGCCTGTTAAATCTGAGTGAAAACTCTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCACACAGTCTCTTAAGCCTGTTAAATCTGAGTGAAAACTCTAAAA  200

seq1  GTCGTGTTTTCCTCCTGGCTGGGGAATTTTCATCTCTGAACTTGAGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTGTTTTCCTCCTGGCTGGGGAATTTTCATCTCTGAACTTGAGACTG  250

seq1  CTCAGAAAATTCCTGTTCCTTTGTGGTTTAGCCTAACAGTACATTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAAATTCCTGTTCCTTTGTGGTTTAGCCTAACAGTACATTTGAGA  300

seq1  GACTTAATGTCTCTTTAGAGTTGCTTGATTTCTGTCAAAATAGTTATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAATGTCTCTTTAGAGTTGCTTGATTTCTGTCAAAATAGTTATATG  350

seq1  TTCAAAGTTTCAATACAGTATATACATTTTAGGATGGAGACTTAGTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTTTCAATACAGTATATACATTTTAGGATGGAGACTTAGTGAGT  400

seq1  AATTCCATAGAGAATCACATCTAAAGGAGGAATAGAGTTATAATGGCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCATAGAGAATCACATCTAAAGGAGGAATAGAGTTATAATGGCAGT  450

seq1  CATGAGACTTTAATTGGTCTTTCCTCTGTGGGACACATATGCGAAGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGACTTTAATTGGTCTTTCCTCTGTGGGACACATATGCGAAGTTAT  500

seq1  ATTTGAAGAACGGAGAAGAGGCAACTCATTATCTTGTTAGTGAATATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGAACGGAGAAGAGGCAACTCATTATCTTGTTAGTGAATATGTT  550

seq1  TATAACATTCACTTCATTTATTTTCATTTGTGGGGTTATGAACACATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATTCACTTCATTTATTTTCATTTGTGGGGTTATGAACACATGAA  600

seq1  AGGAGATATTCACAGAAGCCAAACGAGAACATCTGATACCCTGGAGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATATTCACAGAAGCCAAACGAGAACATCTGATACCCTGGAGCTGG  650

seq1  AGCTACAGGCAATTGTGTGCTGCCTAATGTGGATGTTGGAAATTGAGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGGCAATTGTGTGCTGCCTAATGTGGATGTTGGAAATTGAGCTT  700

seq1  AGGTCCCCAGCAAGAGAAGCACATGTTCTCAACTCTGAGCCATTATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCCAGCAAGAGAAGCACATGTTCTCAACTCTGAGCCATTATAAAA  750

seq1  AGTATTAAGAAATGTACTGCAAGACAGAGAATCATCATGATCCATTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAAGAAATGTACTGCAAGACAGAGAATCATCATGATCCATTTTCT  800

seq1  TTATGGGGAAGCTGATTTAGCATGGTGTAGTATTCTCCAGATATGAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGGAAGCTGATTTAGCATGGTGTAGTATTCTCCAGATATGAATTT  850

seq1  GGAATGACTCCTGACTATGTTTAACTCAAATCCAACTTGAAAAACTCAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGACTCCTGACTATGTTTAACTCAAATCCAACTTGAAAAACTCAAA  900

seq1  ATTTGCAATCACAGATTACATTAAATT-GGGGTGGTAGAAATGGAATCTA  949
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATTTGCAATCACAGATTACATTAAATTGGGGGTGGTAGAAATGGAATCTA  950

seq1  CAGTGAACTGCATAACTTATAAGAATTAGACGCCAACCTTTAGAATCCAT  999
      |||||||||||||||||||||||||||||||||| |||||||||   |||
seq2  CAGTGAACTGCATAACTTATAAGAATTAGACGCC-ACCTTTAGA--TCAT  997

seq1  ATTAAAATGCTGGGTATATGCAGCATTTTACAATGTACAATGTGGCATAC  1049
      ||| ||||||| ||||||||||||| ||||| ||||||||||||||||||
seq2  ATT-AAATGCT-GGTATATGCAGCA-TTTAC-ATGTACAATGTGGCATAC  1043

seq1  TCTTGTAATCCCACATTTGGATGATGAATATCAGTGATTTTCAGAGACTT  1099
      |||||||   |||||||  |||||||||||||||||  |||||||||  |
seq2  TCTTGTA--TCCACATT--GATGATGAATATCAGTGGATTTCAGAGAACT  1089

seq1  GTGGGCCACCCAGCCTAGCCTACTTTATGAGCTCCAGGACAGT-GAGAAA  1148
      ||||||||||||  ||||||||| ||||  ||| ||||||||| ||||||
seq2  GTGGGCCACCCAAGCTAGCCTAC-TTATTGGCT-CAGGACAGTGGAGAAA  1137

seq1  CCTGTC  1154
      ||||||
seq2  CCTGTC  1143


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