BAC Information

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BAC

Clone NameB6Ng01-278D13
Chromosome1 (Build37)
Map Location 77,771,094 - 77,981,351
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039137, Tfdp1-ps, Epha4, LOC100039330
Downstream genePax3, LOC100039210, Sgpp2, LOC100039382, Farsb, Mogat1, Acsl3, Utp14b, LOC620521, Kcne4, LOC100039260, EG545332
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278D13.bB6Ng01-278D13.g
ACCGA078523GA078524
length390622
definitionB6Ng01-278D13.b B6Ng01-278D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,980,956 - 77,981,351)(77,771,094 - 77,771,715)
sequence
tttctaaatgcagccccctctttttgcagtttcttatcgcttctgagtgg
acaagacaggtctcttcattgggcctggtatatctgctgccagcatccga
atactgaaacgagatcagatcagaatctttgtcccagacgaaacatattt
aacctctcaaatctttcttcagaggcccaatctgtctcattcttacaacc
tggaggtggttttcaactacagtaactgaaaccagggcaggatgctgcta
cttttaggatagggcaatgacttctagttcccttgtccaaaatattgttt
ctttttctttctttctttctttctttctttctttctttctttctttcttt
ctttctttctttctttccttccttccttccttccttcctt
gaattcatgcctctatttgcatggcaagcactcttaaccgctgagacatc
ttctcagcctcttgatcagtcttttaaaggctatacaatatttcatggtg
gagacacattgtatttgccatccattgctaccaaaagctagacctggcct
ccagtttattctttttctttgctgcagttaaataataatatatttatgtc
cttagatatcttcatttctctattgttggttttcaggaatagaattgcta
ggatagaaaacacacacacacacacacacattcaattttaatagaaattt
ccaagcaggttgctttcaaaaactgttttaattcacactaccaatgtgtg
agaaaatattctttctgtattcctgtcagtaacagatgtttatacttttt
tttttcaatttttaggaattgctttcttgctttgaatctatttaaatgct
taactccataagacatttgaaggattacagactgatattcctgcaatcaa
ctacattcaaaggagcccaatctttgccagtgtcccaggctttcttttcc
catacttaataacctttattaactttgtgtttattcttttataattgtgt
gtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_77980956_77981351
seq2: B6Ng01-278D13.b_45_440 (reverse)

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAAGAAAGAAAGAAAGAAAGAAAGAA  50

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAACAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGAAACAATATT  100

seq1  TTGGACAAGGGAACTAGAAGTCATTGCCCTATCCTAAAAGTAGCAGCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACAAGGGAACTAGAAGTCATTGCCCTATCCTAAAAGTAGCAGCATC  150

seq1  CTGCCCTGGTTTCAGTTACTGTAGTTGAAAACCACCTCCAGGTTGTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTGGTTTCAGTTACTGTAGTTGAAAACCACCTCCAGGTTGTAAGA  200

seq1  ATGAGACAGATTGGGCCTCTGAAGAAAGATTTGAGAGGTTAAATATGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACAGATTGGGCCTCTGAAGAAAGATTTGAGAGGTTAAATATGTTT  250

seq1  CGTCTGGGACAAAGATTCTGATCTGATCTCGTTTCAGTATTCGGATGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTGGGACAAAGATTCTGATCTGATCTCGTTTCAGTATTCGGATGCTG  300

seq1  GCAGCAGATATACCAGGCCCAATGAAGAGACCTGTCTTGTCCACTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGATATACCAGGCCCAATGAAGAGACCTGTCTTGTCCACTCAGAA  350

seq1  GCGATAAGAAACTGCAAAAAGAGGGGGCTGCATTTAGAAAGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATAAGAAACTGCAAAAAGAGGGGGCTGCATTTAGAAAGAATTC  396

seq1: chr1_77771094_77771715
seq2: B6Ng01-278D13.g_65_686

seq1  GAATTCATGCCTCTATTTGCATGGCAAGCACTCTTAACCGCTGAGACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCCTCTATTTGCATGGCAAGCACTCTTAACCGCTGAGACATC  50

seq1  TTCTCAGCCTCTTGATCAGTCTTTTAAAGGCTATACAATATTTCATGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGCCTCTTGATCAGTCTTTTAAAGGCTATACAATATTTCATGGTG  100

seq1  GAGACACATTGTATTTGCCATCCATTGCTACCAAAAGCTAGACCTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACATTGTATTTGCCATCCATTGCTACCAAAAGCTAGACCTGGCCT  150

seq1  CCAGTTTATTCTTTTTCTTTGCTGCAGTTAAATAATAATATATTTATGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTATTCTTTTTCTTTGCTGCAGTTAAATAATAATATATTTATGTC  200

seq1  CTTAGATATCTTCATTTCTCTATTGTTGGTTTTCAGGAATAGAATTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATATCTTCATTTCTCTATTGTTGGTTTTCAGGAATAGAATTGCTA  250

seq1  GGATAGAAAACACACACACACACACACACATTCAATTTTAATAGAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGAAAACACACACACACACACACACATTCAATTTTAATAGAAATTT  300

seq1  CCAAGCAGGTTGCTTTCAAAAACTGTTTTAATTCACACTACCAATGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGGTTGCTTTCAAAAACTGTTTTAATTCACACTACCAATGTGTG  350

seq1  AGAAAATATTCTTTCTGTATTCCTGTCAGTAACAGATGTTTATACTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATATTCTTTCTGTATTCCTGTCAGTAACAGATGTTTATACTTTTT  400

seq1  TTTTTCAATTTTTAGGAATTGCTTTCTTGCTTTGAATCTATTTAAATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAATTTTTAGGAATTGCTTTCTTGCTTTGAATCTATTTAAATGCT  450

seq1  TAACTCCATAAGACATTTGAAGGATTACAGACTGATATTCCTGCAATCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCATAAGACATTTGAAGGATTACAGACTGATATTCCTGCAATCAA  500

seq1  CTACATTCAAAGGAGCCCAATCTTTGCCAGTGTCCCAGGCTTTCTTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTCAAAGGAGCCCAATCTTTGCCAGTGTCCCAGGCTTTCTTTTCC  550

seq1  CATACTTAATAACCTTTATTAACTTTGTGTTTATTCTTTTATAATTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTAATAACCTTTATTAACTTTGTGTTTATTCTTTTATAATTGTGT  600

seq1  GTGTGTGTGTGTGTGTGTGTGT  622
      ||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGT  622