BAC Information

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BAC

Clone NameB6Ng01-278J01
Chromosome1 (Build37)
Map Location 144,008,830 - 144,009,765
singlet/doubletsinglet
Overlap genenone
Upstream geneEG226472
Downstream geneLOC639376, LOC545369
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278J01.bB6Ng01-278J01.g
ACCGA078776GA078777
length9371,093
definitionB6Ng01-278J01.b B6Ng01-278J01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattaaccaaattcaaacaacagcttaataattacttctaaaat
taaaataattaccatataattgcatagctccaaatggactgaaggaaatt
ttgttaggtccatcataaactaacatcttgtcatgtattaataagagtct
acataactgtttcattttatgtaaagaaatattggctcatattttatttt
agctgcattcatcatagtttggagaactagtttttcacatcaacagaaga
aatctctaatgagttatgatcagtaaaaggaatacagatgttctgaacat
caaatccctcttttctcattactacagcagatgtttggctgacagtttga
ataatgttttactgttcattgtagatcacttttataatttatggaagttt
tagtgaaagcttctaatattcttctttctgtagtcagtggacaagagctt
tggtcagtatgtatggcttgcctagtattccttagttctgggttaattcc
tccaaataataaaaaggcaaaactaaggcatgggatggtatactcttggg
gatttgattttgaggttacctgggaattcgaacatctgctgcaggccaca
gtaaacagttggtcttttgactggtgaataaagagccagcagccaatgct
tgggcaggggaacagaaggggacctttgaggatttaaacagaagaaacac
agaagagagaaggagaaacacaagggcagaaggaaagaagaggatacaaa
catgagagctgtggaagacagaaccaaccatgtaagacacaagggaaagt
ggtcccaggggccactcccccaattgcatttgggagtagtagtgataaag
tatagatcttagaaagcaataactcaagaattttgggagggaaggtgtgt
tagctgcgtggagatttcgaagtggcccaactagtga

gaattcaagaagctaacctcgtataaaccaaacatcccaatcaaaaaatg
ggttatagaagtaaaccgagaattcacaacagagaaatcttgactagcca
aataaaagcacttaagtaaatgttcaaagacttgtgtgatcagaggaata
caactcagaatgaccctcagattccatctcacaccaataagaatggctaa
gatcaattctcaggttacagaacatgttgtgaagaatgtgaagaaagggg
agcactcctccgttactgatgggattgcaacctgttacaaccactctgga
aatcaatccagagttttctcagaaaattgggaataaatctacctgaaggt
ccaggtataccactcttaggcatagaaccaaaagatgccttacaatgctt
caagggcacatgctccattatgttcatagtggccttatttctgagagcca
gaagctagaaacaagccagacgtccctaaaaggaagaatggatacataaa
gtttggttcagttacacaatagaatactcctcagtcattaagaatgagga
caagtgagttttgcaggcaaagggatggacctagaaaatattaccctgag
tgaggtaacccagatacaaaagaacatgcatggtatatactcacaaataa
gtggatattagccaaaaatgtacaaaatactcaagataaaatccacagaa
ctcaaggttaatcagctgaggtgcccaaatggatatgcttcactcccaat
tgggagtgagaagaaagcaatcatcggacaggagggaggggtaaagaaga
gtgggacctgggcaagagagggcagcagaagagaaaggcaaacataatca
gtatttggggagaatagaagggaacccctgaggaccaggagaatgaatgg
aaacagcaaccttgggagaatgggagtggggtgaccctctagaatgttac
tcagagtatcttgtaggtgaagaaaattctcagaactcaatgggacggac
ctggttaatgcccacgtatgcagatggatcttgatcgttcatcccagtta
acagacaggactcagtgaaaggatgggctggccatctatcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144008830_144009765
seq2: B6Ng01-278J01.b_47_983 (reverse)

seq1  TCACTAGCTGGGCCACTTCGAAATCTCCACGCAGCTAACACACCTTCCCC  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TCACTAGTTGGGCCACTTCGAAATCTCCACGCAGCTAACACACCTTCCCT  50

seq1  TCCAAAATTCTTGAGTTATTGCTTTCTAAGATCTATACTTTATCACTACT  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAATTCTTGAGTTATTGCTTTCTAAGATCTATACTTTATCACTACT  100

seq1  ACT-CCAAATGCAATTGGGGGAGTGGCCCCTGGGACCACTTTCCCTTGTG  149
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAAATGCAATTGGGGGAGTGGCCCCTGGGACCACTTTCCCTTGTG  150

seq1  TCTTACATGGTTGGTTCTGTCTTCCACAGCTCTCATGTTTGTATCCTCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATGGTTGGTTCTGTCTTCCACAGCTCTCATGTTTGTATCCTCTT  200

seq1  CTTTCCTTCTGCCCTTGTGTTTCTCCTTCTCTCTTCTGTGTTTCTTCTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTCTGCCCTTGTGTTTCTCCTTCTCTCTTCTGTGTTTCTTCTGT  250

seq1  TTAAATCCTCAAAGGTCCCCTTCTGTTCCCCTGCCCAAGCATTGGCTGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCCTCAAAGGTCCCCTTCTGTTCCCCTGCCCAAGCATTGGCTGCT  300

seq1  GGCTCTTTATTCACCAGTCAAAAGACCAACTGTTTACTGTGGCCTGCAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTTATTCACCAGTCAAAAGACCAACTGTTTACTGTGGCCTGCAGC  350

seq1  AGATGTTCGAATTCCCAGGTAACCTCAAAATCAAATCCCCAAGAGTATAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTTCGAATTCCCAGGTAACCTCAAAATCAAATCCCCAAGAGTATAC  400

seq1  CATCCCATGCCTTAGTTTTGCCTTTTTATTATTTGGAGGAATTAACCCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCATGCCTTAGTTTTGCCTTTTTATTATTTGGAGGAATTAACCCAG  450

seq1  AACTAAGGAATACTAGGCAAGCCATACATACTGACCAAAGCTCTTGTCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGAATACTAGGCAAGCCATACATACTGACCAAAGCTCTTGTCCA  500

seq1  CTGACTACAGAAAGAAGAATATTAGAAGCTTTCACTAAAACTTCCATAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTACAGAAAGAAGAATATTAGAAGCTTTCACTAAAACTTCCATAAA  550

seq1  TTATAAAAGTGATCTACAATGAACAGTAAAACATTATTCAAACTGTCAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAAGTGATCTACAATGAACAGTAAAACATTATTCAAACTGTCAGC  600

seq1  CAAACATCTGCTGTAGTAATGAGAAAAGAGGGATTTGATGTTCAGAACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCTGCTGTAGTAATGAGAAAAGAGGGATTTGATGTTCAGAACAT  650

seq1  CTGTATTCCTTTTACTGATCATAACTCATTAGAGATTTCTTCTGTTGATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCCTTTTACTGATCATAACTCATTAGAGATTTCTTCTGTTGATG  700

seq1  TGAAAAACTAGTTCTCCAAACTATGATGAATGCAGCTAAAATAAAATATG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACTAGTTCTCCAAACTATGATGAATGCAGCTAAAATAAAATATG  750

seq1  AGCCAATATTTCTTTACATAAAATGAAACAGTTATGTAGACTCTTATTAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATATTTCTTTACATAAAATGAAACAGTTATGTAGACTCTTATTAA  800

seq1  TACATGACAAGATGTTAGTTTATGATGGACCTAACAAAATTTCCTTCAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGACAAGATGTTAGTTTATGATGGACCTAACAAAATTTCCTTCAGT  850

seq1  CCATTTGGAGCTATGCAATTATATGGTAATTATTTTAATTTTAGAAGTAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGAGCTATGCAATTATATGGTAATTATTTTAATTTTAGAAGTAA  900

seq1  TTATTAAGCTGTTGTTTGAATTTGGTTAATTGAATTC  936
      |||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGCTGTTGTTTGAATTTGGTTAATTGAATTC  937


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