BAC Information

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BAC

Clone NameB6Ng01-279E18
Chromosome1 (Build37)
Map Location 148,492,278 - 148,493,443
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-279E18.bB6Ng01-279E18.g
ACCGA079312GA079313
length1,1871,170
definitionB6Ng01-279E18.b B6Ng01-279E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgagaaaactgaatgtctgagaagcacctaaaaaattgt
tcaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagatt
ccacctcacacatggtagaatgtctaagatcaaaaacacaggtgaaagca
gatgctagcagacaaggatttggataaataggaacattcctccattattg
gtgggattgcaaggtgttacaaccactctggaaataagtctggttgtttt
ccagaaaattggacatagtactacctgaggactcaaatataccactactt
ggcatacaaaagatggtccaacatataacaaggacacatgttctactata
ttcatatcagccttattcataatagccagaagctggaaaaaaaacagatg
tccttcgacagatgaatagatacagaaaatgtggtatgtttacacaatgg
agtactactcagctattaaaaacaatgaatttataaaattcttaggcaaa
tggatagaatttgaaaatatcatcctaagtgaggtaacccaatcacaaaa
gaacacacatagtatgcactcactgataagtgaatagtagcccaaaagct
cagaatacccaatattcaatttacaaacaacatgaagttcaataaggaag
accaaagtgtggatgcttcagtacttcttagaagggggaacaaaatactc
acaggatgaaatgctgagaagaagtgtggaacagagactgaaggaaaggc
catccagagactgtcccacctggagatccatgccatatacagtaaccaaa
cccagacagtattttgtataccaagaagcacccattgactggagcctgat
atacctgtctcctaagagtctctgacaaatacagaggcacatgctggcag
ccaatcactggactgagcacgggtcccaaaggagaaattagggaaaggac
cgaaagggtttgcaacccatatgaaggaacacagtatcaaccaaccaggc
acacacacccccaagctcccaggactaaccatcaacaaagagtacacatg
acagaccatgctcatctcatatgtagcagggatgctgtgacgtcagtggg
tggaaagcctttgttctggaagctgatgccaggtacgaatctagggcggg
actcagggaatggccaattgagttggtgtaagcatac
gaattccatttgatgaacaaagataagctaattgatcagagaaataactg
tatattttataatctgaatttgtatattttcattttactttaggtgtatg
aatgttttgtttaaatgtattgaatatatcacatggaagcagtgctcata
gaggtcagaagagggcattagattgcctggaactgtagttacaggtataa
tcaggtttctatatggcaaaggcatgaagctggagcaatgtgaggctcag
aagacagatgagcctgagttagaatgttgtgttcctggttccctgtgtgc
tcctatatattttttattccactaaatcttatttttcttattttgtatgc
atatagcttatgtgtataggtcaggtacccacattaaaaaaacattcata
aagataaaccaggaaaatgaatagaaatagcgtacagaaatacctgtaat
atgtagaccattaagtattattagtgtggatcatattataggaaagggaa
aatagtacaaaataacttggtagatattcatattatacattataggtgtt
tttgatatataatatatctatatatacacacatatatatacatatacaca
cctatatatacatgcattctctacataacagcaaatgtgaaattatctta
attcaaattgattcatcttaatcactttatcagtttgacattcttcctgc
tcctcatttttttcaaaaacaatttcttattagatattttcttcatttac
atttcaaatgctatccagaaagtcccctataccttcccccgtgtcctgct
tcccaacccacccactcctgcttcctggccctggcattcccctgtattgg
ggcatataatcttcacaagaccaaggacctctccttccattgatggccga
ctaggccattttctgctacatatgcagctagagacatgagctctgggcat
actgggttagttcatactgttgttcctcctataggttgcaaccccttcaa
ctcttgggtactttcttctagctcctcatagatgactgttatcatccact
tctgtattgcagccactggcataatcctccacaagagacatatgtcaggg
tcctgtcaaccaaaatcctgcttgccatatgccaaatagcgatctgattt
ggttgctctttttataggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148492278_148493443
seq2: B6Ng01-279E18.g_63_1232

seq1  GAATTCCATTTGATGAACAAAGATAAGCTAATTGATCAGAGAAATAACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTGATGAACAAAGATAAGCTAATTGATCAGAGAAATAACTG  50

seq1  TATATTTTATAATCTGAATTTGTATATTTTCATTTTACTTTAGGTGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTATAATCTGAATTTGTATATTTTCATTTTACTTTAGGTGTATG  100

seq1  AATGTTTTGTTTAAATGTATTGAATATATCACATGGAAGCAGTGCTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTGTTTAAATGTATTGAATATATCACATGGAAGCAGTGCTCATA  150

seq1  GAGGTCAGAAGAGGGCATTAGATTGCCTGGAACTGTAGTTACAGGTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGAAGAGGGCATTAGATTGCCTGGAACTGTAGTTACAGGTATAA  200

seq1  TCAGGTTTCTATATGGCAAAGGCATGAAGCTGGAGCAATGTGAGGCTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTTTCTATATGGCAAAGGCATGAAGCTGGAGCAATGTGAGGCTCAG  250

seq1  AAGACAGATGAGCCTGAGTTAGAATGTTGTGTTCCTGGTTCCCTGTGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGATGAGCCTGAGTTAGAATGTTGTGTTCCTGGTTCCCTGTGTGC  300

seq1  TCCTATATATTTTTTATTCCACTAAATCTTATTTTTCTTATTTTGTATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATATTTTTTATTCCACTAAATCTTATTTTTCTTATTTTGTATGC  350

seq1  ATATAGCTTATGTGTATAGGTCAGGTACCCACATTAAAAAAACATTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGCTTATGTGTATAGGTCAGGTACCCACATTAAAAAAACATTCATA  400

seq1  AAGATAAACCAGGAAAATGAATAGAAATAGCGTACAGAAATACCTGTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAACCAGGAAAATGAATAGAAATAGCGTACAGAAATACCTGTAAT  450

seq1  ATGTAGACCATTAAGTATTATTAGTGTGGATCATATTATAGGAAAGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGACCATTAAGTATTATTAGTGTGGATCATATTATAGGAAAGGGAA  500

seq1  AATAGTACAAAATAACTTGGTAGATATTCATATTATACATTATAGGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACAAAATAACTTGGTAGATATTCATATTATACATTATAGGTGTT  550

seq1  TTTGATATATAATATATCTATATATACACACATATATATACATATACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATATAATATATCTATATATACACACATATATATACATATACACA  600

seq1  CCTATATATACATGCATTCTCTACATAACAGCAAATGTGAAATTATCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATATACATGCATTCTCTACATAACAGCAAATGTGAAATTATCTTA  650

seq1  ATTCAAATTGATTCATCTTAATCACTTTATCAGTTTGACATTCTTCCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATTGATTCATCTTAATCACTTTATCAGTTTGACATTCTTCCTGC  700

seq1  TCCTCATTTTTTTCAAAAACAATTTCTTATTAGATATTTTCTTCATTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTTTTTTCAAAAACAATTTCTTATTAGATATTTTCTTCATTTAC  750

seq1  ATTTCAAATGCTATCCAGAAAGTCCCCTATACCTTCCCCCGTGTCCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATGCTATCCAGAAAGTCCCCTATACCTTCCCCCGTGTCCTGCT  800

seq1  TCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTATTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTGTATTGG  850

seq1  GGCATATAATCTTCACAAGACCAAGGACCTCTCCTTCCATTGATGGCCGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATAATCTTCACAAGACCAAGGACCTCTCCTTCCATTGATGGCCGA  900

seq1  CTAGGCCATTTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGGGCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCATTTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGGGCAT  950

seq1  ACT-GGTTAGTTCATACTGTTGTTCCTCCTATAGGGTTGCAAACCCCTTC  999
      ||| ||||||||||||||||||||||||||||| |||||| |||||||||
seq2  ACTGGGTTAGTTCATACTGTTGTTCCTCCTATA-GGTTGC-AACCCCTTC  998

seq1  AACTCCTTGGGTACTTTC-TCTAGCTCCTCCAATAGATGACTGTTATCAT  1048
      |||| ||||||||||||| |||||||||||  ||||||||||||||||||
seq2  AACT-CTTGGGTACTTTCTTCTAGCTCCTC--ATAGATGACTGTTATCAT  1045

seq1  CCACTTCTGTATTTGCCAGGCACTGGCAT-ATCCT-CACAAGAGACATAT  1096
      |||||||||||||   ||| ||||||||| ||||| ||||||||||||||
seq2  CCACTTCTGTATT--GCAGCCACTGGCATAATCCTCCACAAGAGACATAT  1093

seq1  GTCAGGGTCCTGTC-ACCAAAATCTTGC-TGGCATATGC--AATAGCG-T  1141
      |||||||||||||| ||||||||| ||| || |||||||  ||||||| |
seq2  GTCAGGGTCCTGTCAACCAAAATCCTGCTTGCCATATGCCAAATAGCGAT  1143

seq1  CTGGGTTTGGTGG--CTTTTTA-AGGGA  1166
      || | |||||| |  ||||||| |||||
seq2  CT-GATTTGGTTGCTCTTTTTATAGGGA  1170