BAC Information

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BAC

Clone NameB6Ng01-281D20
Chromosome1 (Build37)
Map Location 19,030,527 - 19,031,677
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040126, Crisp4, EG574082, EG654460, Defb17, LOC383499, EG435611
Downstream geneLOC100040189, Tcfap2d, LOC100040413, Tcfap2b, LOC100040198, LOC226901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281D20.bB6Ng01-281D20.g
ACCGA080768GA080769
length8291,149
definitionB6Ng01-281D20.b B6Ng01-281D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattgagaaggagtgaattcagaggacaaaagtaactttgcatc
attaaaaagattctcataacttctcataaccaatccagcctcaaaactgt
tgacctacaacttgtcctgcctacaagttgtgctctgtggtaaggtggca
gaaaaactggggaagagatgaatcgctgactgatccaacttgagacccaa
gcaaagagcagaagcccactccccatattgcctggagggccaggaaccag
aggctggatagctcagaaacctatgaaaccaccaaatacaaccagaaaaa
gtcaataaaatgattcctaatattttgctaacttgtagacaagagtctat
cacagttgtcagaagagaggcttcatccagcaatggatggaaacagatgc
aaagacagatagccaaacattaggtagagcttgtggaatctgccggaagg
tgggtaatgtaggagacaaagaggccaaggacttcacaagaaaatccaca
gaatcaacctgcctgggctgaaaggagaccatagagactaaactgacaat
cagggaggtagaggtctgatctaggccctctacataaaattatgtttatg
tagcttggtgttcttgtggaactcctaacagtggagactgggctgtcttt
cactcttttgcctgctttggggacctgtttccttccactgtgttgcttct
tccagcctgaatatgaggggaggtgccttgtctgataacaacttgatatg
ctatgtttggttgatatccttgggaggcttgcccttttcagaagagatgt
gaaggaggagtagatggggaaggaatttt

gaattctttagcaactctgccaaatatttaaagtccttataaatggatgt
caaatatgctgaatttataaatgcaatcttacatgtcttaggaaattaaa
ctaagaaaatttgcatatggagaattattaaaagcattaattttgctcta
gaatggattacaattattcaaaagcctttttacaggacatttttgattta
ttgaaggagagggctaagctaatgcggctcagcgggtaagcagactttct
gctagtcctgtgacctaaattcagtcctcagctccacttcatagaaagag
agaatttacttctgaaagtttttctctgacctctgtgtgagtaaacacac
acacaccataaaataaatgtctttcttaaacttccttttaaatgattgaa
aaaattcacagcatataatagtgaacaaagtgttgaggaaagcaaaattt
taggtttaataaactgtttctctgaattggatttctctgattccatagat
taatcatgacctgaaatatatagttgattgattaagttttataattttaa
aaattgacaagcagaacccatggtacggtgatcaacctagcaactttgat
tacaaattttcctacatcatataccatctagaaaaatataaaaaatattt
ttttcaactttaatatgttctttatatcaactttttcatcaaccataaat
atcaactcctctccttggaccaacccttaaacgtttagatagatacatgc
tcatcaaaaacagatccaaactgatttaaagtttttcccactaaattcct
aagttggatgaaatgccaaaagttggatatatggcaaggcttgcttgtgt
aggtcttcagactctaaaaaacagggacagagaaacttcccagtgcacat
gactagatgtaagccacccactcaacatctctgaatagtaaatgttattg
ggaaagtttccatcccacaagtttccatcaaatttgacagctgctgatag
tgcctatcatcaaaatcattttccagagttataaacatgaaactgctgat
gattatagattgctatatataaacatataaatatattaagcatgaagtca
tatatatatatgtaatgctaatcctatgactcaatgcttagcaggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_19030527_19031677
seq2: B6Ng01-281D20.g_64_1212

seq1  GAATTCTTTAGCAACTCTGCCAAATATTTAAAGTCCTTATAAATGGATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGCAACTCTGCCAAATATTTAAAGTCCTTATAAATGGATGT  50

seq1  CAAATATGCTGAATTTATAAATGCAATCTTACATGTCTTAGGAAATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATGCTGAATTTATAAATGCAATCTTACATGTCTTAGGAAATTAAA  100

seq1  CTAAGAAAATTTGCATATGGAGAATTATTAAAAGCATTAATTTTGCTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAAATTTGCATATGGAGAATTATTAAAAGCATTAATTTTGCTCTA  150

seq1  GAATGGATTACAATTATTCAAAAGCCTTTTTACAGGACATTTTTGATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGATTACAATTATTCAAAAGCCTTTTTACAGGACATTTTTGATTTA  200

seq1  TTGAAGGAGAGGGCTAAGCTAATGCGGCTCAGCGGGTAAGCAGACTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGAGAGGGCTAAGCTAATGCGGCTCAGCGGGTAAGCAGACTTTCT  250

seq1  GCTAGTCCTGTGACCTAAATTCAGTCCTCAGCTCCACTTCATAGAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCCTGTGACCTAAATTCAGTCCTCAGCTCCACTTCATAGAAAGAG  300

seq1  AGAATTTACTTCTGAAAGTTTTTCTCTGACCTCTGTGTGAGTAAACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTACTTCTGAAAGTTTTTCTCTGACCTCTGTGTGAGTAAACACAC  350

seq1  ACACACCATAAAATAAATGTCTTTCTTAAACTTCCTTTTAAATGATTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATAAAATAAATGTCTTTCTTAAACTTCCTTTTAAATGATTGAA  400

seq1  AAAATTCACAGCATATAATAGTGAACAAAGTGTTGAGGAAAGCAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCACAGCATATAATAGTGAACAAAGTGTTGAGGAAAGCAAAATTT  450

seq1  TAGGTTTAATAAACTGTTTCTCTGAATTGGATTTCTCTGATTCCATAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTAATAAACTGTTTCTCTGAATTGGATTTCTCTGATTCCATAGAT  500

seq1  TAATCATGACCTGAAATATATAGTTGATTGATTAAGTTTTATAATTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATGACCTGAAATATATAGTTGATTGATTAAGTTTTATAATTTTAA  550

seq1  AAATTGACAAGCAGAACCCATGGTACGGTGATCAACCTAGCAACTTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGACAAGCAGAACCCATGGTACGGTGATCAACCTAGCAACTTTGAT  600

seq1  TACAAATTTTCCTACATCATATACCATCTAGAAAAATATAAAAAATATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTTTCCTACATCATATACCATCTAGAAAAATATAAAAAATATTT  650

seq1  TTTTCAACTTTAATATGTTCTTTATATCAACTTTTTCATCAACCATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACTTTAATATGTTCTTTATATCAACTTTTTCATCAACCATAAAT  700

seq1  ATCAACTCCTCTCCTTGGACCAACCCTTAAACGTTTAGATAGATACATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTCCTCTCCTTGGACCAACCCTTAAACGTTTAGATAGATACATGC  750

seq1  TCATCAAAAACAGATCCAAACTGATTTAAAGTTTTTCCCACTAAATTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAAAACAGATCCAAACTGATTTAAAGTTTTTCCCACTAAATTCCT  800

seq1  AAGTTGGATGAAATGCCAAAAGTTGGATATATGGCAAGGCTTGCTTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGATGAAATGCCAAAAGTTGGATATATGGCAAGGCTTGCTTGTGT  850

seq1  AGGTCTTCAGACTCTAAAAAACAGGGACAGAGAAACTTCCCAGTGCACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTCAGACTCTAAAAAACAGGGACAGAGAAACTTCCCAGTGCACAT  900

seq1  GACTAGATGTAAGCCACCCACTCAACATCTCTGAATAGTAAATGTTATT-  949
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GACTAGATGTAAGCCACCCACTCAACATCTCTGAATAGTAAATGTTATTG  950

seq1  GGAAAGTTTCCATCCCACAAGTTTCCCATCAAA-TTGACAGCTGCTGATA  998
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  GGAAAGTTTCCATCCCACAAGTTT-CCATCAAATTTGACAGCTGCTGATA  999

seq1  GTGCCTATCATCAAAATCATTTTCCAGAGTTTATAAACATGAAACTGCTG  1048
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTGCCTATCATCAAAATCATTTTCCAGAG-TTATAAACATGAAACTGCTG  1048

seq1  ATGATTATAGATTGCTAATATATAAACATATAAATATA-TAAGCATGATT  1097
      |||||||||||||||| ||||||||||||||||||||| |||||||||  
seq2  ATGATTATAGATTGCT-ATATATAAACATATAAATATATTAAGCATGAAG  1097

seq1  TTATATATATATATGTTATTGTTTATCTCTATTGTTTTAATGCTTAGCA-  1146
      | ||||||||||||| || || | ||| ||| ||  | ||||||||||| 
seq2  TCATATATATATATG-TAATGCTAATC-CTA-TGACTCAATGCTTAGCAG  1144

seq1  GTGGG  1151
      |||||
seq2  GTGGG  1149


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